Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_C06
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibit... 32 0.29
At5g12930.1 68418.m01483 expressed protein 30 1.5
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.5
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 2.0
At2g44790.1 68415.m05574 uclacyanin II strong similarity to ucla... 29 2.0
At1g61030.1 68414.m06871 expressed protein 29 3.6
At3g11760.1 68416.m01443 expressed protein 28 4.7
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 28 4.7
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 28 4.7
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 28 4.7
At5g38840.1 68418.m04698 forkhead-associated domain-containing p... 28 6.2
At4g33400.1 68417.m04747 dem protein-related / defective embryo ... 28 6.2
At1g79410.1 68414.m09254 transporter-related low similarity to o... 28 6.2
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 28 6.2
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 27 8.2
At2g30880.1 68415.m03763 pleckstrin homology (PH) domain-contain... 27 8.2
At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid t... 27 8.2
At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid t... 27 8.2
>At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibitor
family protein similar to extensin-like protein [Zea
mays] GI:5917666
Length = 264
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/72 (30%), Positives = 27/72 (37%)
Frame = +1
Query: 364 ESGWDNPFRPDGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNAS 543
ES D+PF I S I PVA+P+ P D + S
Sbjct: 26 ESRSDSPFSTPAPAPEVMKPIASPANSPAEIYTDSPVASPEAPADSFSPKNPPVEIDIYS 85
Query: 544 LPASPQTKVASP 579
ASP+ VASP
Sbjct: 86 PAASPEAPVASP 97
>At5g12930.1 68418.m01483 expressed protein
Length = 439
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 463 TPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGTKNGAAV 633
TP A + P D KEE A N S PA T + V + + + T+ +V
Sbjct: 346 TPQRAVLEAPVDSVKEEPATLGQTNKSAPAKSSTSLVKSVKPPSVVSPSTTRKPVSV 402
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Frame = +1
Query: 448 KPITPTPPVAAP--QLPTDEHKEEKAEANNVNASLPAS-----PQTKVASPVLQTTP 597
KP+TP PP +P PT E + V A P S P SPV +++P
Sbjct: 821 KPVTPLPPATSPMANAPTPSSSESGEISTPVQAPTPDSEDIEAPSDSNHSPVFKSSP 877
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +1
Query: 442 GGKP----ITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTP 597
GG P I+P+PP+ P PT + ++ S P++ + + P TTP
Sbjct: 420 GGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIVPSPPSTTPSPGSPPTSPTTP 475
>At2g44790.1 68415.m05574 uclacyanin II strong similarity to
uclacyanin II GI:3399769 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin II GI:3399768
Length = 202
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +1
Query: 427 VSLIKG--GKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPK 600
V+++ G G P TPTPP + P PT + P + T P PK
Sbjct: 122 VNVVAGSAGPPATPTPPSSTPGTPTTPESPPSGGSPTPTTPTPGAGSTSPPPP-----PK 176
Query: 601 AMNGTK 618
A +K
Sbjct: 177 ASGASK 182
>At1g61030.1 68414.m06871 expressed protein
Length = 840
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 537 RQSPCVSTNESGKSGTTDHSESNERNKEWRGSGGG 641
++S CV N S +S +D+ S +RNK R GGG
Sbjct: 41 QESSCV-WNYSSRSTFSDNDFSEKRNKRPRNGGGG 74
>At3g11760.1 68416.m01443 expressed protein
Length = 702
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 454 ITPTP-PVAAPQLPTDEHKEEKAEANNVNASL 546
+ P P P +PQ PT+ H EK + + + A L
Sbjct: 188 VVPLPLPSPSPQQPTETHSVEKEDVSAIKAGL 219
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 28.3 bits (60), Expect = 4.7
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Frame = +1
Query: 235 ARPQCLSPPPTAEQDSY--ILYPPLLSTVSDDMADNAVYNRQIXTESGWDNPFRPDGDLS 408
A P C++PP T SY + PP T+ + ++ N NP PD +
Sbjct: 58 APPFCINPPNTPPSSSYPGLSPPPGPITLPNPPDSSSNPNSNPNPPESSSNPNPPDSSSN 117
Query: 409 READEIVSLIKGGKPIT-PTPPVAAPQ-LPTDEHKEEKAEANNVNASLPASPQTKVASP 579
++ P+T P PP ++ P D + N +S +P V +P
Sbjct: 118 PNSNP-------NPPVTVPNPPESSSNPNPPDSSSNPNSNPNPPESSSNPNPPVTVPNP 169
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 PPPTAEQDSYI--LYPPLLSTVSDDMADNAVYNRQIXTESGWDNPFRPDGDLSREADEIV 429
PPP A + + + L + V++ A V + + E + P + E E+V
Sbjct: 20 PPPKAVESEEVTTVSESLPAPVTESQAPVEVTTKDLVVEET-EKPIEETEEAQVETPEVV 78
Query: 430 SLIKGGKPITPTPPVAAPQLPTDEHKEEKAE 522
+ K + TP V + T+E E K E
Sbjct: 79 EIKKDEEAPVETPVVVEDESKTEEVVEAKKE 109
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 451 PITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPV 582
P T T P A+P P A NN++ A PQ SPV
Sbjct: 24 PFTNTNPFASPNHPFFTGPTAVAPPNNIHLYQAAPPQQPQTSPV 67
>At5g38840.1 68418.m04698 forkhead-associated domain-containing
protein / FHA domain-containing protein related to
adaptor protein kanadaptin [Homo sapiens]
gi|13562130|gb|AAK29177
Length = 735
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 382 PFRPDGDLSREADEIVSLIKGGKPITPTPP---VAAPQLPTDEHKEEKAEANNVNASLPA 552
P P+ ++DE S + P P PP + + +E K ++ V+A P
Sbjct: 20 PPEPNSTSISQSDE-TSTMNPPPPRNPNPPDLKTTEVVVEPEPIEESKDDSVTVDADKPV 78
Query: 553 SPQTKVASPVLQTTPK 600
P+T +PV T P+
Sbjct: 79 RPRTVKQNPVPYTIPE 94
>At4g33400.1 68417.m04747 dem protein-related / defective embryo and
meristems protein-related identical to dem GI:2190419
from [Lycopersicon esculentum]
Length = 645
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 370 GWDNPFRPDGDLSREADEIVSLIKGGKPITP 462
GW NP D + +AD+I+ GG TP
Sbjct: 220 GWANPEAADDSMWEDADDILLQSPGGGSATP 250
>At1g79410.1 68414.m09254 transporter-related low similarity to
organic anion transporter 3 [Rattus norvegicus]
GI:5545293; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 515
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 529 YSLQPFPPCVRQSATVEPRPVELE*WACRP**ARLSR 419
Y ++ FP CVR SAT+ R + AC P A L R
Sbjct: 427 YLVELFPTCVRNSATMMLRQALVVGGACCPLIASLGR 463
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = -1
Query: 340 QRYPPYRR*LWTAGGGIKCKSPAPL*EAETDTAVVPPW*NDTRTFERSELKNAQSQKITE 161
Q P Y R +G +K L + D AV PW D T LKN + + E
Sbjct: 298 QDLPAYERYFMISG--LKGSGVKDLSQYLMDQAVKKPWEEDAFTMSEEVLKNISLEVVRE 355
Query: 160 HLI 152
L+
Sbjct: 356 RLL 358
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 451 PITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTP 597
P TPTPPV P PT V P +P V +P T P
Sbjct: 187 PPTPTPPVVTPPTPTPPVITPPTPTPPV--ITPPTPTPPVVTPPTPTPP 233
>At2g30880.1 68415.m03763 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 504
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 484 QLPTDEHKEEKAEANNVNASLPASPQTK 567
QL T + EEK E+ N ASLP + +T+
Sbjct: 383 QLETKQVCEEKTESTNGEASLPMTKETE 410
>At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Frame = +1
Query: 439 KGGK-----PITPTPPVAAPQLPTDEHKEEKAEANNVNA-SLPASPQTKVASPVLQ-TTP 597
KGGK P P PPV P+LP K V LP P T PV T P
Sbjct: 35 KGGKHSPKAPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVP 94
Query: 598 K 600
K
Sbjct: 95 K 95
>At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Frame = +1
Query: 439 KGGK-----PITPTPPVAAPQLPTDEHKEEKAEANNVNA-SLPASPQTKVASPVLQ-TTP 597
KGGK P P PPV P+LP K V LP P T PV T P
Sbjct: 35 KGGKHSPKAPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVP 94
Query: 598 K 600
K
Sbjct: 95 K 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,772,746
Number of Sequences: 28952
Number of extensions: 314625
Number of successful extensions: 1160
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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