Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_C02
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842 142 1e-34
04_04_0299 - 24243364-24244259,24244417-24244428,24245092-242451... 136 9e-33
03_05_0387 + 23708447-23708470,23708616-23708739,23709081-237092... 48 3e-06
01_06_0521 + 30001662-30001752,30001883-30001999,30002099-300022... 42 2e-04
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 36 0.017
03_02_0315 - 7401708-7401860,7401962-7402123,7402211-7402279,740... 34 0.051
06_01_0042 + 410061-410544,411401-411837 33 0.089
08_02_1615 + 28257275-28258428,28258523-28259144 30 1.1
03_02_0930 - 12480983-12481888 29 1.4
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 29 1.9
10_08_0965 + 21915842-21916906 29 1.9
03_06_0680 - 35497868-35497884,35498058-35501961 29 1.9
07_01_0939 + 7939716-7940220,7940675-7941564 29 2.5
11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229 28 3.3
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 28 3.3
07_03_0028 + 12611734-12612522 28 3.3
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 28 3.3
02_04_0109 + 19812544-19814474,19814574-19814607 28 3.3
12_01_0646 + 5474234-5476189 28 4.4
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 4.4
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480... 28 4.4
05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351 28 4.4
03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435 28 4.4
11_01_0791 + 6627961-6630702 27 5.8
03_06_0404 + 33692534-33693607 27 5.8
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 27 5.8
11_01_0692 - 5700394-5700474,5700546-5702675,5705033-5706169,570... 27 7.7
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846... 27 7.7
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 27 7.7
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 27 7.7
06_03_0398 - 20379748-20379820,20379930-20380024,20380127-203802... 27 7.7
05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,375... 27 7.7
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 27 7.7
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 27 7.7
>02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842
Length = 355
Score = 142 bits (345), Expect = 1e-34
Identities = 67/112 (59%), Positives = 84/112 (75%)
Frame = +3
Query: 135 SSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXLIKQRLSNVKHKI 314
S VP +A +HCPGTQSE+AGKA ACAGCPNQ ICA+ PDP + I +R++ VKHKI
Sbjct: 14 SDVPADANEHCPGTQSEEAGKADACAGCPNQQICATAPKG-PDPDLVGIVERMATVKHKI 72
Query: 315 LILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGE 470
L+LSGKGGVGKST ++ + LA M D VG+LD DICGPS P++LG+ G+
Sbjct: 73 LVLSGKGGVGKSTFSAQLSFALAEM--DCQVGLLDIDICGPSIPKMLGLEGQ 122
>04_04_0299 -
24243364-24244259,24244417-24244428,24245092-24245193,
24245298-24245340
Length = 350
Score = 136 bits (329), Expect = 9e-33
Identities = 67/114 (58%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
Frame = +3
Query: 141 VPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPA----VXLIKQRLSNVKH 308
VP+NA HCPGTQSE AGKA ACAGCPNQ ICA+ PDP + I +R++ VKH
Sbjct: 8 VPENANDHCPGTQSEAAGKADACAGCPNQQICATAPKG-PDPGAITHLLAIIERMNTVKH 66
Query: 309 KILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGE 470
KIL+LSGKGGVGKST ++ + LA M D VG+LD DICGPS P++LG+ G+
Sbjct: 67 KILVLSGKGGVGKSTFSAQLSFALAEM--DHQVGLLDIDICGPSIPKMLGLEGQ 118
>03_05_0387 +
23708447-23708470,23708616-23708739,23709081-23709203,
23710723-23710820,23711778-23711918,23712236-23712361,
23713316-23713486
Length = 268
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +3
Query: 291 LSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGE 470
++ V I + SGKGGVGKST I LA + VG+LDADI GPS P ++ + +
Sbjct: 27 IAGVSDIIAVASGKGGVGKSTTAVNIAVALAKKF-QLKVGLLDADIYGPSIPTMMNLHAK 85
>01_06_0521 +
30001662-30001752,30001883-30001999,30002099-30002229,
30002320-30002370,30002639-30002689,30002864-30003007,
30003082-30003224,30003376-30003448,30003540-30003635,
30003737-30003835,30003905-30003958,30004032-30004155,
30004420-30004544,30004720-30004842,30004948-30005028
Length = 500
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 330 KGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVL 455
KGGVGKSTV + + LA M VGI DAD+ GPS P ++
Sbjct: 147 KGGVGKSTVAVNLAYTLAGMG--ARVGIFDADVFGPSLPTMV 186
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 243 GEASQPDPAVXLIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINV 407
G+ + PDP V + L K + + GKGGVGK+T +S++ LAS + V
Sbjct: 6 GDGAMPDPTV---RNLLEQESLKWVFVGGKGGVGKTTCSSILSILLASARQSVLV 57
>03_02_0315 -
7401708-7401860,7401962-7402123,7402211-7402279,
7403332-7403596,7404613-7404737,7404826-7404933,
7405102-7405249,7406013-7406065
Length = 360
Score = 34.3 bits (75), Expect = 0.051
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 282 KQRLSNVKHKILILSGKGGVGK-STVTSLIGHGLASMS 392
K + NV +++ GKGGVGK STV S++G +A++S
Sbjct: 63 KLKEENVSTLTILVMGKGGVGKSSTVNSIVGERVATVS 100
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 33.5 bits (73), Expect = 0.089
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 312 ILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDAD 425
+++ SGKGGVGK+T T+ + LA +S ++ +DAD
Sbjct: 39 VVVTSGKGGVGKTTTTANLAASLARLS--LSAVAVDAD 74
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +3
Query: 159 QHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXLIKQRLSNVKHKILILSGKGG 338
+H P + E + A G S+PD + L LS K + L G G
Sbjct: 412 EHKPSMEREGGVELEAVTGRVELRDVEFSYPSRPDVGI-LRGLSLSVPAGKTIALVGSSG 470
Query: 339 VGKSTVTSLI 368
GKSTV SLI
Sbjct: 471 SGKSTVVSLI 480
>03_02_0930 - 12480983-12481888
Length = 301
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 126 SNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQ 227
S+ S+VP AP+ P + G + C CPN+
Sbjct: 38 SDASAVPPAAPRQPPAAAAPAGGLSPCCCYCPNR 71
>12_02_0496 +
19704429-19704613,19705874-19706736,19706764-19706951,
19707190-19708200
Length = 748
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/32 (31%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +3
Query: 276 LIKQRLSNVKHK-ILILSGKGGVGKSTVTSLI 368
++++ L +H+ ++++ G GG+GK+T+ SL+
Sbjct: 85 IMERLLQPTEHREVIVIVGMGGIGKTTLASLV 116
>10_08_0965 + 21915842-21916906
Length = 354
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 373 CPISDVTVLFPTPPLPDKIRI 311
CP+ ++ P PPLPD +R+
Sbjct: 167 CPLCRASIALPHPPLPDLLRV 187
>03_06_0680 - 35497868-35497884,35498058-35501961
Length = 1306
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +3
Query: 96 KRINSRQIVISNMSSVP-DNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAV 272
K +N +++I+ M++ + P+ P S K + NI + +
Sbjct: 124 KIVNEMEVLIAEMNAFRFEFRPE--PPISSMKWRKTDCKISNLSMNIAIRSRSEDKQKII 181
Query: 273 XLIKQRLSNVKHKILILSGKGGVGKSTVTSLI 368
+ ++SN +L + G GG+GK+T+ LI
Sbjct: 182 NTLLAQVSNRDLTVLPIVGMGGMGKTTLVQLI 213
>07_01_0939 + 7939716-7940220,7940675-7941564
Length = 464
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 279 IKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLA 383
+KQR +K KILI GG + + L+ H L+
Sbjct: 429 VKQRADELKKKILICLKNGGSTQQAIDKLVDHMLS 463
>11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229
Length = 632
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 276 LIKQRLSNVKHKILILSGKGGVGKSTVTSLI 368
LIK+ + +L + G+GG+GKST+ +
Sbjct: 197 LIKKSAFEASYMVLAIVGQGGMGKSTLAQYV 227
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +3
Query: 129 NMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEA--SQPDPAVXLIKQRLSNV 302
N + + H P Q+ D G S+ G PNQ + S +A P +QR N
Sbjct: 1806 NQPKIYGSQMPHSP-IQTSDVGSQSSMQGSPNQTMLTSQQAPLHSSSPLAQQQQQRYMNP 1864
Query: 303 KH 308
H
Sbjct: 1865 SH 1866
>07_03_0028 + 12611734-12612522
Length = 262
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +3
Query: 111 RQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXLIKQR 290
+Q ++ ++ + + PGT S G + P + + A +S P P + +
Sbjct: 19 QQATVAATATATSDGIRDSPGTSSPFRGGGGSTTPTPQRPVKAGSSSSPPPPPTTAMDKT 78
Query: 291 LSNVKHKILIL 323
LS+V + +L
Sbjct: 79 LSSVANLAKLL 89
>02_05_0385 -
28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +3
Query: 252 SQPDPAVXLIKQRLSNVKHKILILSGKGGVGKSTVTSLI 368
S+PD V L + L KI+ L G G GKSTV SLI
Sbjct: 416 SRPD-VVILDRFSLDFPAGKIVALVGGSGSGKSTVVSLI 453
>02_04_0109 + 19812544-19814474,19814574-19814607
Length = 654
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 338 GRKKYCDITNWARSCINES*YKRRYTRCRHLRPE-PAASVGRXR 466
GRK++ D T+ A N S +R+TRC P+ P S R R
Sbjct: 335 GRKQFSDRTSHAHRLSNVSREDKRHTRCSESIPQTPKESRKRSR 378
>12_01_0646 + 5474234-5476189
Length = 651
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 285 QRLSNVKH-KILILSGKGGVGKSTVTSLIGH 374
Q N H I+ + G GG+GK+T+ LI H
Sbjct: 214 QDAKNNNHVPIMSIVGHGGIGKTTLAQLISH 244
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 282 KQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDIN 404
KQ S K K ++LSG G+GK+T ++ L + ++N
Sbjct: 443 KQADSGAK-KAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVN 482
>06_03_0783 -
24546403-24546765,24547202-24547262,24547899-24548004,
24548118-24551600,24553134-24553179
Length = 1352
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 297 NVKHKILILSGKGGVGKSTVTSLI 368
+V +++ + G GG+GK+T+T LI
Sbjct: 243 SVSPEVITIVGTGGIGKTTLTQLI 266
>05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351
Length = 1007
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 294 SNVKHKILILSGKGGVGKSTVTSLI 368
++V IL + G GGVGK+T+T L+
Sbjct: 191 NHVNLSILPIVGMGGVGKTTLTQLV 215
>03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435
Length = 415
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 315 LILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLG 458
+++ G G GKST L + PDI V + D P P V+G
Sbjct: 106 VMIMGDRGTGKSTTV----RSLVDLLPDIRVVVGDPFNSDPDDPEVMG 149
>11_01_0791 + 6627961-6630702
Length = 913
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 306 HKILILSGKGGVGKSTV 356
HK++ +SG GG+GK+T+
Sbjct: 192 HKVITVSGMGGLGKTTL 208
>03_06_0404 + 33692534-33693607
Length = 357
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 264 PAVXLIKQRLSNVKHKILILSGKGGVGKS 350
P L+ + + VKHK +++ G G GKS
Sbjct: 38 PVAPLVLRHGAGVKHKAVVVMGATGTGKS 66
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 279 IKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGL 380
IK+R +V ++L G G GKST++SL+G L
Sbjct: 147 IKERKESVT---VLLCGTSGCGKSTLSSLLGSRL 177
>11_01_0692 -
5700394-5700474,5700546-5702675,5705033-5706169,
5709679-5709975
Length = 1214
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 297 NVKHKILILS--GKGGVGKSTVTSLI 368
N+K KI+IL G GG+GK+T ++
Sbjct: 181 NIKDKIIILPIYGIGGIGKTTFAKMV 206
>08_02_0731 -
20483518-20484154,20484182-20484375,20484541-20484640,
20485282-20485622
Length = 423
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 459 RPTLAAGSGRRCRHRVYLRLYQDSLMQDRAQLVMSQY 349
+P LAAG G +L LY+ +++DR +L+ +Y
Sbjct: 100 QPQLAAGGGVAGEEGYHLILYKYHMIRDRNRLIPYRY 136
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 276 LIKQRLSNVKHKILILSGKGGVGKSTVTSLI 368
L + + K IL + G GG+GK+T+ L+
Sbjct: 272 LTSEECARKKLSILAIIGDGGIGKTTLAKLV 302
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 294 SNVKHKILILSGKGGVGKSTVTSLI 368
SN K KI+ + G GG+GK+T+ + +
Sbjct: 195 SNRKTKIVYVVGMGGLGKTTLATAV 219
>06_03_0398 -
20379748-20379820,20379930-20380024,20380127-20380222,
20380342-20380501,20380844-20381016,20381102-20381206,
20381460-20381565,20381741-20381947,20383478-20383563,
20383655-20383846
Length = 430
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 460 TPNTRGWLGPQMSASSIPTFISGLIDARPCPISDVTVLFPTPPLPDKIRI 311
TP R L ++A S+ ++ + A PI VT F P PDK+ +
Sbjct: 13 TPVARRRLMGAVAARSMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNV 62
>05_01_0471 -
3751497-3751522,3751760-3751800,3752466-3752507,
3753249-3753310,3753398-3753584,3753692-3753826,
3753872-3753948,3754005-3754076,3754389-3754588,
3754675-3755020,3755463-3755519,3755655-3757433,
3757539-3757720,3757943-3758072
Length = 1111
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 141 VPDNAPQHCPGTQSEDAGKASACAGCPNQNI 233
VPDNA CP + + +A CP+Q++
Sbjct: 569 VPDNASLPCPEQHVPEETQINAGLSCPDQHL 599
>04_04_1197 +
31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 243 GEASQPDPAVXLIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 413
G A++ + LI SN +L + G GG+GK+T+ L+ L S NV I
Sbjct: 318 GRAAEMETIKQLIMSNRSN-GITVLPIVGNGGIGKTTLAQLVCKDLVIKS-QFNVKI 372
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 351 TVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVR 464
TVTS++ +S SP + V +LD++I ++ VL V+
Sbjct: 2683 TVTSVVPSSSSSSSPVLFVSLLDSNIVVMNEGLVLSVK 2720
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,965,205
Number of Sequences: 37544
Number of extensions: 273170
Number of successful extensions: 1096
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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