Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C02
         (475 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...   147   3e-36
Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical pr...    30   0.98 
AL032643-6|CAA21657.1|  538|Caenorhabditis elegans Hypothetical ...    30   0.98 
Z68220-9|CAL64002.1|  312|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z68220-8|CAA92487.1|  221|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF125954-4|AAD14710.1|  337|Caenorhabditis elegans Seven tm rece...    28   3.0  
AC006769-5|AAF60577.2|  339|Caenorhabditis elegans Hypothetical ...    28   3.0  
U50301-3|AAM29676.1|  370|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical pr...    27   5.2  
AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical ...    27   5.2  
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un...    27   6.9  
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z81116-13|CAB03300.1|  245|Caenorhabditis elegans Hypothetical p...    27   9.1  

>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score =  147 bits (357), Expect = 3e-36
 Identities = 71/114 (62%), Positives = 81/114 (71%)
 Frame = +3

Query: 132 MSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXLIKQRLSNVKHK 311
           MS VPD+A   CPGT S  AGKAS CAGCPNQ  CA+G+   PD  V  I+ R S +KHK
Sbjct: 1   MSDVPDDANAGCPGTGSAGAGKASGCAGCPNQGSCATGQGPPPDADVPKIQDRFSRIKHK 60

Query: 312 ILILSGKGGVGKSTVTSLIGHGLASMSPDINVGILDADICGPSQPRVLGVRGEQ 473
           ILILSGKGGVGKST+TS +   LAS  P   V ILD DICGPSQPR++GV  E+
Sbjct: 61  ILILSGKGGVGKSTLTSNLARALAS-DPSKQVAILDVDICGPSQPRMMGVEDEE 113


>Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical
           protein K08F4.1 protein.
          Length = 850

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 309 KILILSGKGGVGKSTVTSLIGHGLASMSPDIN 404
           K+L+LSG  G+GKST+  ++       + D+N
Sbjct: 331 KMLLLSGPAGLGKSTLARIVARQAGYSTIDVN 362


>AL032643-6|CAA21657.1|  538|Caenorhabditis elegans Hypothetical
           protein Y54E5A.4 protein.
          Length = 538

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 457 PNTRGWLGPQMSASSIPTFISGLIDARPCPISDVTVLFPTPP 332
           P T G  G + + S+ PT   GL  +   P +  T  F  PP
Sbjct: 126 PATGGLFGAKSTTSAAPTLGGGLFGSSTAPAAAATTSFGAPP 167


>Z68220-9|CAL64002.1|  312|Caenorhabditis elegans Hypothetical
           protein T20D3.5b protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 403 FISGLIDARPCPISDVTVLFPTPPLPDKIRILCFTLER 290
           F+SG+ +A  CP+  V VL  T    DK +    T  R
Sbjct: 131 FLSGVCEAMLCPLERVQVLLQTTIFHDKFKNTLHTFNR 168


>Z68220-8|CAA92487.1|  221|Caenorhabditis elegans Hypothetical
           protein T20D3.5a protein.
          Length = 221

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 403 FISGLIDARPCPISDVTVLFPTPPLPDKIRILCFTLER 290
           F+SG+ +A  CP+  V VL  T    DK +    T  R
Sbjct: 40  FLSGVCEAMLCPLERVQVLLQTTIFHDKFKNTLHTFNR 77


>AF125954-4|AAD14710.1|  337|Caenorhabditis elegans Seven tm
           receptor protein 119 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 323 QDQNFVLYIGETLFYQXYCGVRLRCFSRCANVLIRASSTG*SFTSIL 183
           +D   V  +    +Y   CGV +  + +C ++LI  S  G S TSI+
Sbjct: 170 EDSYAVAQLSAVYYYYDKCGVLVIHWLQCFSILILYSIMGTSITSIV 216


>AC006769-5|AAF60577.2|  339|Caenorhabditis elegans Hypothetical
           protein Y45G12C.10 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 323 QDQNFVLYIGETLFYQXYCGVRLRCFSRCANVLIRASSTG*SFTSIL 183
           +D   V  +    +Y   CGV +  + +C ++LI  S  G S TSI+
Sbjct: 172 EDSYAVAQLSAVYYYYDKCGVLVIHWLQCFSILILYSIMGTSITSIV 218


>U50301-3|AAM29676.1|  370|Caenorhabditis elegans Hypothetical
           protein F20D6.8 protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 264 PAVXLIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPD 398
           P + L   +   +KH +L + G    GK ++ + I H   SM+P+
Sbjct: 157 PDIFLFDSQNCLMKHVVLRIYGARNCGKKSLANRIHHFATSMAPE 201


>Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical
           protein F47B10.1 protein.
          Length = 435

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 297 NVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDINVGI 413
           N    I+I S +GGV    V +     +  M  D+NVGI
Sbjct: 147 NTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGI 185


>AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical
           protein Y61B8B.1 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 157 GALSGTLLIFDITI*RLLIRLKPKFS 80
           GA+ G L++ +  + RL++RLKP+ S
Sbjct: 204 GAIFGCLVLVNTDLIRLMVRLKPQIS 229


>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 6 protein.
          Length = 2098

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +3

Query: 303 KHKILILSGKGGVGKSTVTSLIGHGLASMS 392
           K++ +I+SG+ G GK+  T L+   LA++S
Sbjct: 147 KNQSVIISGESGAGKTESTKLVLQFLATIS 176


>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
           protein F30H5.3 protein.
          Length = 1599

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 201 SACAGCPNQNICASGEASQPDPAVXLIKQRLSNVK 305
           S C G  N ++C  GE +  + A   +++ L NV+
Sbjct: 875 SVCCGATNMDVCPEGEKAYVNAADMGVRECLINVE 909


>Z81116-13|CAB03300.1|  245|Caenorhabditis elegans Hypothetical
           protein T06C12.14 protein.
          Length = 245

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -3

Query: 335 PFTGQDQNFVLYIGETLFYQXYCGVRLRCFSRCANVLIRASSTG*SFTSILALSSRA 165
           P    D++    +G   F   YC    R  SRCA+     SST  SF S  + + RA
Sbjct: 164 PDCANDRSICNAVGLQTFVNTYCQ---RTCSRCASATTTRSSTCTSFISDSSTACRA 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,756,294
Number of Sequences: 27780
Number of extensions: 218134
Number of successful extensions: 641
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)