Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C02
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   2.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   3.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.9  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 315 LILSGKGGVGKSTVTSLIGHGL 380
           L+     G+GK  +  L+G G+
Sbjct: 11  LVTGANSGIGKCLIECLVGKGM 32


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 5   DKNKNISNXAMNLFRLTQLLLNHSIREL 88
           D+N+N+ N  +NL  +   +L  ++ +L
Sbjct: 381 DRNQNVLNNDLNLEHVNFQILGANVNDL 408


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 336 GVGKSTVTSLIGHGLASMSPDINVGILD 419
           G G     S IG  L  +SP+I +  +D
Sbjct: 213 GAGTGGTISGIGRKLKELSPNIKIIAVD 240


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 308 VLYIGETLFYQXYCGVR 258
           VL I + L    YCG+R
Sbjct: 675 VLLISDRLSRDLYCGIR 691


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 308 VLYIGETLFYQXYCGVR 258
           VL I + L    YCG+R
Sbjct: 713 VLLISDRLSRDLYCGIR 729


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,870
Number of Sequences: 438
Number of extensions: 2781
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)