Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_C01
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 43 2e-04
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 40 0.001
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 38 0.005
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.009
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 37 0.012
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.050
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.15
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 33 0.20
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.61
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 30 1.4
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 29 2.5
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 3.3
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 29 4.3
SB_9764| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-05) 29 4.3
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_58035| Best HMM Match : Casein (HMM E-Value=1.9) 28 5.7
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 28 5.7
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.5
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 28 7.5
SB_36409| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_7300| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 27 9.9
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 448 PTVP-EDSSPAPRNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLF 624
P P E + P PR CG+ I GG + E+PW L YLT + CGG L
Sbjct: 235 PDTPIEPAKPKPRFDCGIK-YTSNIIGGTDAAVGEWPWQVSL-YLTHYGPV---CGGTLL 289
Query: 625 NARYVLTA 648
+ +VLTA
Sbjct: 290 TSEWVLTA 297
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +1
Query: 436 GHVDPTVPEDSSPAPRNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGG 615
G TV + P P CGV + RI GG + ++PW A L T Y CGG
Sbjct: 365 GKTTTTVVPPTLP-PVGVCGVSSSTSRIVGGAAANPGDWPWQAQLRTTTG---FPY-CGG 419
Query: 616 VLFNARYVLTA 648
L ++ +VLTA
Sbjct: 420 SLIHSNWVLTA 430
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 448 PTVPEDSS--PAPR-NQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGV 618
PT P P P CGV RI GG E+PW A+L + T + CGG
Sbjct: 185 PTTPTSPPVPPVPSVPNCGVRPPASRIVGGNDAMHGEWPWQAMLMFQTPLGYKQF-CGGA 243
Query: 619 LFNARYVLTA 648
L + +V+TA
Sbjct: 244 LVHEDWVVTA 253
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +1
Query: 457 PEDSSPAPRNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARY 636
P + P P CG RI GG + +PW A+ L S + CGG L + +
Sbjct: 240 PPQTPPPPTGSCGSKPSGTRIVGGTEAPVNGWPWQAM---LRSAGGSQF-CGGSLIHPEW 295
Query: 637 VLTA 648
VLTA
Sbjct: 296 VLTA 299
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +1
Query: 490 CGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
CGV RI GGQ + ++PW A L T CGG L N +V+TA
Sbjct: 424 CGVRNALGRIVGGQTAKVEDWPWQA---GLKKGLDDTIVCGGSLINREWVVTA 473
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 487 QCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
+CGV RI GG + +PW A+L L S N + CGG L + +VLTA
Sbjct: 20 ECGVKPGGSRIVGGTEAPINGWPWQAML--LRSPNGDQF-CGGSLIDPGWVLTA 70
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 496 VDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
V + +I GG+ T+ +PW +GY T+ + CGG + N+++++TA
Sbjct: 1776 VGSSLQQIVGGKVTEHGAWPWQVQIGY----KTMGHICGGSIVNSQWIVTA 1822
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +1
Query: 463 DSSPAPRNQCGVDTQXD-----RIYGGQFTDLXEFPWMALLGYLTSR-NTITYQCGGVLF 624
D+ P+ R CG ++ RIYGG + +PW L + T + N T+ CGG L
Sbjct: 1138 DALPSCRPICGETSKPTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLI 1197
Query: 625 NARYVLTA 648
+VLTA
Sbjct: 1198 AEDWVLTA 1205
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 490 CGV-DTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
CGV D+ R+ G L E+PW A L ++T + CGG L ++VLTA
Sbjct: 52 CGVSDSASSRVVSGDDATLGEWPWQAWL-HVTPHG---FVCGGSLIAPQWVLTA 101
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 35.1 bits (77), Expect = 0.050
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 457 PEDSSPAPRNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQ-CGGVLFNAR 633
P ++ AP CGV RI GG ++PW A L R+T + CGG L + +
Sbjct: 645 PFPTTQAPVASCGVRPST-RIVGGTAAKQGDWPWQAQL-----RSTSGFPFCGGSLIHPQ 698
Query: 634 YVLTA 648
+VLTA
Sbjct: 699 WVLTA 703
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +1
Query: 448 PTVPEDSSPAPRNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFN 627
P P + P +CG RI GQ +PW L + +T CGG L +
Sbjct: 406 PPPPPTNGPPSEGKCGRKPAGARIINGQNAQPHSWPWQISLRGRSGFHT----CGGSLIS 461
Query: 628 ARYVLTA 648
R+V+TA
Sbjct: 462 DRWVVTA 468
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 448 PTVPEDSSPAP--RNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVL 621
P P P P +CG RI GQ +PW L + +T CGG L
Sbjct: 81 PPPPSSGPPLPPSNGKCGRKPAGARIINGQNAQPHSWPWQISLRGRSGFHT----CGGSL 136
Query: 622 FNARYVLTA 648
+ R+V+TA
Sbjct: 137 ISDRWVVTA 145
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +1
Query: 478 PRNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
P CG RI GG + +PW A+ L S + CGG L + +VLTA
Sbjct: 207 PSGSCGSKPSGTRIVGGTEAPVNGWPWQAM---LRSAGGSQF-CGGSLIHPEWVLTA 259
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 490 CGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
CG R+ G +PW L ++ + + CGG L ++ +VLTA
Sbjct: 29 CGQRPSQSRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTA 81
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
RI GG+ +PW + L + N T+ CGG L + ++LT+
Sbjct: 245 RIVGGREAPRNSWPWQVEI-ILKTPNLTTHYCGGSLIDPYWILTS 288
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 481 RNQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
+ CG+ RI GG +PW A L S + + CGG L + R+V+TA
Sbjct: 13 QGSCGMKPST-RIVGGTAAPKNAWPWQA---QLRSASGFPF-CGGTLVHPRFVVTA 63
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
RI GG +PW +L Y + R CGG L +V+TA
Sbjct: 630 RIVGGSTAPPGAWPWQVMLIYNSGRQF----CGGTLVTPEWVITA 670
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
RI GG ++PW A + ++ ++CGG L + +V+TA
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVDKSW-NHRCGGTLIDTEWVVTA 327
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 484 NQCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
++CG RI GQ +PW L + + CGG L + R+V+TA
Sbjct: 835 SECGRKPAGARIINGQNAQPHSWPWQISL----RQGRRFHLCGGALISDRWVVTA 885
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 487 QCGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
+CG R+ GG+ +PW L R + CGG L + +VLTA
Sbjct: 426 KCGRRPSGARVIGGEDAAPHSWPWQISL-----RVRGKHMCGGTLISPDWVLTA 474
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 490 CGVDTQXDRIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
CG+ RI GG +PW A L + + Y CGG L + +++LTA
Sbjct: 46 CGIRPHT-RIVGGTAAKQNSWPWQA---QLRTTSGFPY-CGGSLIHPQWILTA 93
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 484 NQCGVDTQXD-RIYGGQFTDLXEFPWMALLGYLTSRN-TITYQCGGVLFNARYVLTA 648
++CG + + R+ G + +PW L L SR+ + ++CGG L + +V+TA
Sbjct: 32 DKCGQRSILEKRVVSGSEVEPQSWPWQVHL--LQSRDGSFLHKCGGALIDREWVVTA 86
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
RI GG +PW + CGG L N +VLTA
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTA 170
>SB_9764| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-05)
Length = 434
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 317 ITMWFSGHTYREFVVGLYRRNKRGRLRHAQEQRGLR 424
+T+W S YR++V +R K RH + +GLR
Sbjct: 140 VTLW-SDRIYRQYVSVSFREKKTQSCRHTFKAKGLR 174
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
RI GG T +PW L+ R CGG L + ++VLTA
Sbjct: 107 RIVGGHDTVKGAYPWHVLI-----RKGGHVACGGSLISEKWVLTA 146
>SB_58035| Best HMM Match : Casein (HMM E-Value=1.9)
Length = 450
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 434 SATSTPQCQKTRPQLLGINAEWTHXVTESMGVSSRTXMNFLGWL 565
SAT+ C K + L G A + + E M V SRT + GWL
Sbjct: 70 SATAVRLC-KHKMYLKGYRAPGFYLLLEDMQVGSRTILLAFGWL 112
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
RI GG+ +PW+A + Y+ +++CGG L +V+TA
Sbjct: 723 RIVGGREAKAGAWPWLAAI-YVKG----SFRCGGALIARDWVVTA 762
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLT 645
R+ GG +FPW L L R CGG L + R+V+T
Sbjct: 28 RVVGGDEAKAGQFPWQIAL--LFKRQ---QYCGGALVHERWVVT 66
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLT 645
RI GG+ + +PW A + Y + G L +R+VLT
Sbjct: 92 RIVGGKISAKAAWPWQAAIYYKDRGRNFLF--NGALIKSRWVLT 133
>SB_36409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 387 ADYATLKNNAAS-DECGRPRRPHSARRLVPSSSESMRSG 500
+D TLK A DE G P++PH +R+ + + R G
Sbjct: 1220 SDGFTLKGKKAEIDEKGAPQKPHLSRKALGKVKPAARQG 1258
>SB_7300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 609 ALIGYGIPTRQISKQSHPRKFX*VRELTPIDSVTLCVHSALIPRS 475
AL GIPT + ++ KF +RE+TP + + L +H +I +S
Sbjct: 93 ALAKAGIPTLEERRKIACSKF--IREVTPDNPLHLLIHKRIINQS 135
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 387 ADYATLKNNAASDECGRPRRPHSARRLVPSSSESMRSGHTX*QNLW 524
AD + ++A S G R HS PS+S S+ + + N W
Sbjct: 1361 ADIEQVTSSAQSQGSGENREVHSTHSTAPSTSHSITNHISLESNTW 1406
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,545,409
Number of Sequences: 59808
Number of extensions: 380574
Number of successful extensions: 969
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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