Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_C01
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 31 0.70
Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein. 30 1.2
U13070-6|AAC46643.1| 470|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 28 6.6
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 28 6.6
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 28 6.6
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 28 6.6
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 8.7
AC024800-6|AAF60726.1| 416|Caenorhabditis elegans Hypothetical ... 27 8.7
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +1
Query: 490 CGVDTQXDRIYGGQFTDLXEFPWMALLG-YLTSRN---TITYQCGGVLFNARYVLTA 648
CG + + +I+ G+ ++ E PW + Y +N T + C G L + R++LTA
Sbjct: 33 CGKNVK-SKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTA 88
>Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical
protein K05C4.6 protein.
Length = 678
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +2
Query: 293 QSGQLPETITMWFSGHTYREFVVGLYRRNKRGRLRHAQEQRGLRRMWSATS--TPQCQKT 466
+SG L E I M + E VV R L H + R R +A TP KT
Sbjct: 161 RSGGLAEIIRMLYDS---LESVVHYAVTTLRNLLMHVSDSRAQARALNAVEALTPHLHKT 217
Query: 467 RPQLLGINAEWTHXVTESMGVSSRTXMNFLG 559
P+LL A+ + + S T ++ LG
Sbjct: 218 NPKLLAQVADGLYFLLIDDAPSKITFLSLLG 248
>AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein.
Length = 678
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +2
Query: 293 QSGQLPETITMWFSGHTYREFVVGLYRRNKRGRLRHAQEQRGLRRMWSATS--TPQCQKT 466
+SG L E I M + E VV R L H + R R +A TP KT
Sbjct: 161 RSGGLAEIIRMLYDS---LESVVHYAVTTLRNLLMHVSDSRAQARALNAVEALTPHLHKT 217
Query: 467 RPQLLGINAEWTHXVTESMGVSSRTXMNFLG 559
P+LL A+ + + S T ++ LG
Sbjct: 218 NPKLLAQVADGLYFLLIDDAPSKITFLSLLG 248
>U13070-6|AAC46643.1| 470|Caenorhabditis elegans Hypothetical
protein F01F1.9 protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 201 NDLKEHSSKKATTQATTLYSSFYAHRETI 115
+ ++E + + QATTLYS+FY T+
Sbjct: 437 HSIREFADTSSIYQATTLYSTFYERLSTV 465
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 618 HTAALIGYGIPTRQISKQSHPRKFX*VRELTPIDSVTLCVHSALI 484
H AA G+ +P Q+ K+ V TP+D C H+ ++
Sbjct: 645 HLAAKEGHTLPVCQLLKRGADSNLANVDSKTPLDIAMECTHADIV 689
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 618 HTAALIGYGIPTRQISKQSHPRKFX*VRELTPIDSVTLCVHSALI 484
H AA G+ +P Q+ K+ V TP+D C H+ ++
Sbjct: 729 HLAAKEGHTLPVCQLLKRGADSNLANVDSKTPLDIAMECTHADIV 773
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 618 HTAALIGYGIPTRQISKQSHPRKFX*VRELTPIDSVTLCVHSALI 484
H AA G+ +P Q+ K+ V TP+D C H+ ++
Sbjct: 645 HLAAKEGHTLPVCQLLKRGADSNLANVDSKTPLDIAMECTHADIV 689
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 618 HTAALIGYGIPTRQISKQSHPRKFX*VRELTPIDSVTLCVHSALI 484
H AA G+ +P Q+ K+ V TP+D C H+ ++
Sbjct: 729 HLAAKEGHTLPVCQLLKRGADSNLANVDSKTPLDIAMECTHADIV 773
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 210 PLGEASECVSLYDCSQLLSAFEQRPLQSKVVSFLRQSQCGFQGIRTESLLWAF 368
P G A +C S+ DC Q + + + + K+V L QG RT S + F
Sbjct: 2059 PYGTAGDCYSMKDCPQGIFSIDLKSAGLKLVDDLNWED---QGHRTSSRIDRF 2108
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 210 PLGEASECVSLYDCSQLLSAFEQRPLQSKVVSFLRQSQCGFQGIRTESLLWAF 368
P G A +C S+ DC Q + + + + K+V L QG RT S + F
Sbjct: 2059 PYGTAGDCYSMKDCPQGIFSIDLKSAGLKLVDDLNWED---QGHRTSSRIDRF 2108
>AC024800-6|AAF60726.1| 416|Caenorhabditis elegans Hypothetical
protein Y49F6A.5 protein.
Length = 416
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 228 ECVSLYDCSQLLSAFEQRPLQSKVVSFLRQSQCGFQGIRTE 350
EC+ L DCSQ ++++ +++ + F R++ C F+ + E
Sbjct: 46 ECMDL-DCSQEPQDWKEQTAKAQGLQFRRENNCSFKVTKQE 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,151,251
Number of Sequences: 27780
Number of extensions: 272643
Number of successful extensions: 683
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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