Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_C01
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 32 0.004
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.27
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.27
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.27
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 26 0.36
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 25 0.83
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.1
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 32.3 bits (70), Expect = 0.004
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +1
Query: 514 RIYGGQFTDLXEFPWMALLGYLTSRNTITYQCGGVLFNARYVLTA 648
RI GG T + EFP MA + I CG + + RYVLTA
Sbjct: 160 RIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTA 201
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 148 GGDLSDFITNGEWYLIGMPGKKNTITYQC 176
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 148 GGDLSDFITNGEWYLIGMPGKKNTITYQC 176
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 148 GGDLSDFITNGEWYLIGMPGKKNTITYQC 176
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 148 GGDLSDFITNGEWYLIGMPGKKNTITYQC 176
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 148 GGDLSDFITNGEWYLIGMPGKKNTITYQC 176
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 148 GGDLSDFITNGEWYLIGMPGKKNTITYQC 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 216 GGDLSDFITNGEWYLIGMPGKKNTITYQC 244
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 523 GGQFTDLXEFPWMALLGYLTSRNTITYQC 609
GG +D L+G +NTITYQC
Sbjct: 216 GGDLSDFITNGEWYLIGMPGKKNTITYQC 244
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.8 bits (54), Expect = 0.36
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 295 LLCKGRCSNADNS*EQSYNETHSLASPS 212
L+ RC+N DN YN H+ A S
Sbjct: 408 LIRNSRCANFDNQDNNHYNHNHNQARHS 435
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 24.6 bits (51), Expect = 0.83
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 298 TLLCKGRCSNADNS*EQSYNETHSLA-SPSG 209
T CKG C + ++ N T+SLA SP G
Sbjct: 456 TFCCKGYCMDLLKELSKTINFTYSLALSPDG 486
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +3
Query: 324 CGFQGIRTESLLWAFTGATREADYATLKNNA 416
C QG+ T +++W ++ +Y L+ A
Sbjct: 731 CQAQGVPTPTIVWKKATGSKSGEYEELRERA 761
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +3
Query: 324 CGFQGIRTESLLWAFTGATREADYATLKNNA 416
C QG+ T +++W ++ +Y L+ A
Sbjct: 727 CQAQGVPTPTIVWKKATGSKSGEYEELRERA 757
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,202
Number of Sequences: 438
Number of extensions: 3526
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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