Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_C01
         (648 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g28130.1 68417.m04033 diacylglycerol kinase accessory domain-...    27   8.1  

>At4g28130.1 68417.m04033 diacylglycerol kinase accessory
           domain-containing protein similar to diacylglycerol
           kinase [Lycopersicon esculentum] GI:10798892; contains
           Pfam profile PF00609: Diacylglycerol kinase accessory
           domain (presumed)
          Length = 466

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 447 PHSARRLVPSSSESMRSGHTX*QNLW 524
           PHS  R+ PS  E+M   HT     W
Sbjct: 209 PHSLPRIFPSDQENMEGYHTYRGGFW 234


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,316,650
Number of Sequences: 28952
Number of extensions: 250538
Number of successful extensions: 596
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)