Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B21
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.8  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   8.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 309 HPAKSAHPTHLRCSEHP 259
           HP  S HP HL  S HP
Sbjct: 233 HPGLSPHPPHL--SSHP 247


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 309 HPAKSAHPTHLRCSEHP 259
           HP  S HP HL  S HP
Sbjct: 125 HPGLSPHPPHL--SSHP 139


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 173  TVYLCVLWNFYNLNNCA 223
            T YL  LW  Y + NCA
Sbjct: 1292 TRYLHCLWGKYEVFNCA 1308



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 609  TARAYQPQEPALERSSRICEPGLVV 535
            T   Y+PQEP L      C+  L V
Sbjct: 2219 TTIGYEPQEPVLPAEVVPCQGRLFV 2243


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 520 SPGPMNNQTGF 552
           SPGP  N TGF
Sbjct: 296 SPGPYTNATGF 306


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 122 IINYCSFLYISAKSSLFVV 66
           I NYC FLY    S+L ++
Sbjct: 138 IENYCQFLYNCFHSTLLLM 156


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 386 WVHHRYRKVHXGSDRPRQLERAP 454
           WV  R R  H G   P++  + P
Sbjct: 19  WVPQRLRIRHHGDKPPQERPKVP 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,496
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)