Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B21
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0307 + 2414709-2414762,2415769-2415841,2416090-2416154,241...    52   5e-07
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510...    29   2.4  
06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983...    29   3.2  
09_06_0231 + 21733151-21734905                                         28   7.4  

>03_01_0307 +
           2414709-2414762,2415769-2415841,2416090-2416154,
           2416288-2416365,2416880-2416999,2418021-2418091,
           2418808-2418900,2419242-2419311,2420236-2420436,
           2421345-2421557,2422354-2422440,2422441-2422652,
           2422901-2423042,2423424-2423592,2424050-2424126,
           2424393-2424563,2425095-2425171,2425299-2425401,
           2426066-2426185,2426301-2426444,2426826-2426975,
           2427398-2427541,2427816-2427903,2428672-2428799,
           2429329-2429533,2429843-2430015,2430174-2430392,
           2430490-2430684
          Length = 1213

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = +3

Query: 276 VDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFITGIAKYIXEATVHAN-LNEL 452
           +  L   +L DEQP ++     +L    + TN       +      + E T   N LN L
Sbjct: 9   IAALSTFSLEDEQPDVQGLAV-LLSSERYATNSPIEYSDVAAYRLSLGEDTKAINQLNTL 67

Query: 453 LEXGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVDKLLQFMYFQ 623
           ++ G   A +LYT+R C +A+PQ   + +  +  +Y  T QVL  E+ +L +   +Q
Sbjct: 68  IQEGKEMASLLYTYRSCVKALPQLPDSMKHSQADLYLETYQVLDLEMSRLREIQRWQ 124


>07_03_1757 +
           29250163-29250349,29250612-29250813,29250898-29251008,
           29251112-29251160,29251247-29251353,29251439-29251942,
           29252486-29252614,29252865-29253161,29253274-29253720,
           29253828-29253893,29254109-29254169,29254314-29254463,
           29254555-29254689,29254791-29254818,29255430-29255479
          Length = 840

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +2

Query: 422 SDRPRQLERAPGXRERPRCHAVHVALLQPC 511
           S RP  L   P  R R   HA H+ALL  C
Sbjct: 16  SPRPPLLRLLPQPRRRRHAHAKHIALLTNC 45


>06_03_0956 +
           26296744-26297382,26297595-26297669,26298147-26298341,
           26298426-26298559,26298713-26298779,26298985-26299043,
           26299204-26299321,26299613-26299726,26299855-26299986,
           26300076-26300492,26300904-26300954,26301303-26301373,
           26302067-26302151,26302258-26302410,26302522-26302596,
           26302755-26302844,26303953-26304000,26304081-26304195,
           26305356-26305459,26305582-26305692
          Length = 950

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 216 IVQKAMSVSEKVSLSDALSNVDVLDELTLPDEQPCIEA 329
           +VQ A  + E V   + L+NV+ LD L L     C+ +
Sbjct: 199 VVQAAHCIGEAVERENRLNNVEALDSLALYTTDRCVRS 236


>09_06_0231 + 21733151-21734905
          Length = 584

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = -3

Query: 542 WLFIG--PGLRYGTAAATPRVQHDSVGVPXFQELVQVGVDGRFLYVLCDTGDE 390
           WLF+    G  +G  AA   V    V    ++ +   G+ GRFL+ +   GDE
Sbjct: 186 WLFLFGVEGDGWGATAAATAVHALDVDAQRWRRVGADGLRGRFLFSVAGVGDE 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,266,830
Number of Sequences: 37544
Number of extensions: 317431
Number of successful extensions: 829
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)