Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_B21
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 161 5e-40
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 161 5e-40
AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81560-5|CAB04550.2| 123|Caenorhabditis elegans Hypothetical pr... 28 6.6
U49830-8|AAK31475.1| 439|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF077546-8|AAC26320.2| 649|Caenorhabditis elegans Hypothetical ... 28 6.6
Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical p... 27 8.7
Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF014940-8|AAY43994.1| 356|Caenorhabditis elegans Hypothetical ... 27 8.7
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 161 bits (390), Expect = 5e-40
Identities = 73/137 (53%), Positives = 95/137 (69%)
Frame = +3
Query: 237 VSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFITGIAKYI 416
++ V++ DA+SNV++LD L +PD+ P IEA +LY++NFDTNFEDR+ F+TGIAKY
Sbjct: 1 MNANVTVDDAISNVNLLDTLAIPDDLPDIEARALPLLYRSNFDTNFEDRSAFVTGIAKYS 60
Query: 417 XEATVHANLNELLEXGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVD 596
EAT HA N++L G HA +YTWRCCSRA+P +SN+QP+R I E V+VL PEV
Sbjct: 61 EEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSNDQPNRTEINEMVVEVLKPEVS 120
Query: 597 KLLQFMYFQRKXIXGLC 647
KL FM F I C
Sbjct: 121 KLGSFMRFTLTAIQRFC 137
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 161 bits (390), Expect = 5e-40
Identities = 73/137 (53%), Positives = 95/137 (69%)
Frame = +3
Query: 237 VSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFITGIAKYI 416
++ V++ DA+SNV++LD L +PD+ P IEA +LY++NFDTNFEDR+ F+TGIAKY
Sbjct: 1 MNANVTVDDAISNVNLLDTLAIPDDLPDIEARALPLLYRSNFDTNFEDRSAFVTGIAKYS 60
Query: 417 XEATVHANLNELLEXGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVD 596
EAT HA N++L G HA +YTWRCCSRA+P +SN+QP+R I E V+VL PEV
Sbjct: 61 EEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSNDQPNRTEINEMVVEVLKPEVS 120
Query: 597 KLLQFMYFQRKXIXGLC 647
KL FM F I C
Sbjct: 121 KLGSFMRFTLTAIQRFC 137
>AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical
protein Y106G6D.1 protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 225 KAMSVSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNF-EDRNGFITG 401
K M + K ++ S ++ E TLP++QP ++ L + NF E R T
Sbjct: 132 KKMEMEIKFYQNENFSLRRMMMETTLPEQQPALKELFKMTLKLDTLENNFYESRKSINTK 191
Query: 402 IAKYIXEATVHANLNE--LLEXGNAHAV 479
+ Y+ E + L + L + G H++
Sbjct: 192 LINYMEECKLLQELKDEMLTQKGFLHSI 219
>Z81560-5|CAB04550.2| 123|Caenorhabditis elegans Hypothetical
protein K02E2.6 protein.
Length = 123
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -3
Query: 449 LVQVGVDGRFLYVLCDTG 396
+VQVGV+G+ ++VL DTG
Sbjct: 28 VVQVGVNGKVVHVLLDTG 45
>U49830-8|AAK31475.1| 439|Caenorhabditis elegans Hypothetical
protein C33F10.7a protein.
Length = 439
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 514 YLSPGPMNNQTGFTYTRGPFKCW 582
YL P N + GFTY + P W
Sbjct: 347 YLIGEPQNKEHGFTYFKSPLNTW 369
>AF077546-8|AAC26320.2| 649|Caenorhabditis elegans Hypothetical
protein T08E11.1 protein.
Length = 649
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 491 RVQHDSVGVPXFQELVQVGVDG---RFLYVLCDTGDEPI 384
R+ V Q LV++ G RF YV CD+ DE +
Sbjct: 205 RIHASKVSANDIQTLVEIAYKGSSLRFFYVRCDSFDEDV 243
>Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 216 IVQKAMSVSEKVSLSDALSNVDVLDELTLPDEQPCIE 326
I QK ++EKV +S + N + L D +PC+E
Sbjct: 450 IGQKFAQLNEKVMISHIVRNFKIEPTLKYNDTKPCLE 486
>Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 216 IVQKAMSVSEKVSLSDALSNVDVLDELTLPDEQPCIE 326
I QK ++EKV +S + N + L D +PC+E
Sbjct: 450 IGQKFAQLNEKVMISHIVRNFKIEPTLKYNDTKPCLE 486
>AF014940-8|AAY43994.1| 356|Caenorhabditis elegans Hypothetical
protein W02D7.2 protein.
Length = 356
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 351 QANFDTNFEDRNGFITGIAKYIXEATVHANLNE 449
Q +N+ D+ G + Y TVHANL++
Sbjct: 69 QIRVGSNYPDKRGARVSVLTYSDSPTVHANLSD 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,250,999
Number of Sequences: 27780
Number of extensions: 286600
Number of successful extensions: 818
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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