Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B21
         (652 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g18410.2 68418.m02167 expressed protein similar to p53 induci...    48   5e-06
At5g18410.1 68418.m02166 expressed protein similar to p53 induci...    48   5e-06
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc...    29   2.0  
At5g28470.1 68418.m03461 proton-dependent oligopeptide transport...    29   3.5  
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR...    28   6.2  
At1g32320.1 68414.m03981 mitogen-activated protein kinase kinase...    27   8.2  

>At5g18410.2 68418.m02167 expressed protein similar to p53 inducible
           protein [Homo sapiens] GI:5616320
          Length = 1017

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = +3

Query: 276 VDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFITGIAKYIXEATVHAN-LNEL 452
           +  L   +L DEQP ++  P  ++      T+       +      + E T   N LN L
Sbjct: 9   IAALSTFSLEDEQPEVQG-PAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKALNQLNTL 67

Query: 453 LEXGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVDKLLQFMYFQ 623
           ++ G   A +LYT+R C +A+PQ   + +  +  +Y  T QVL  E+ +L +   +Q
Sbjct: 68  IQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREIQRWQ 124


>At5g18410.1 68418.m02166 expressed protein similar to p53 inducible
           protein [Homo sapiens] GI:5616320
          Length = 1234

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = +3

Query: 276 VDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFITGIAKYIXEATVHAN-LNEL 452
           +  L   +L DEQP ++  P  ++      T+       +      + E T   N LN L
Sbjct: 9   IAALSTFSLEDEQPEVQG-PAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKALNQLNTL 67

Query: 453 LEXGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVDKLLQFMYFQ 623
           ++ G   A +LYT+R C +A+PQ   + +  +  +Y  T QVL  E+ +L +   +Q
Sbjct: 68  IQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREIQRWQ 124


>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
           mitochondrial, putative / acetylornithine transaminase,
           putative / AOTA, putative / ACOAT, putative similar to
           SP|O04866 Acetylornithine aminotransferase,
           mitochondrial precursor (EC 2.6.1.11) (ACOAT)
           (Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
           contains Pfam profile PF00202: aminotransferase, class
           III
          Length = 457

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -3

Query: 443 QVGVDGRFLYVLCDTGDEPIAVFKVSIEISLIQDRARCCFDTW 315
           ++G +GR   VL + GD+ ++V K S+   +I++ A+    T+
Sbjct: 32  RIGFNGRIASVLTNAGDQAVSV-KASVSQKVIEEEAKVIVGTY 73


>At5g28470.1 68418.m03461 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 561

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 408 KYIXEATVHANLNELLEXGNAHAVMLYTWRCCS 506
           ++  +A++  N NEL E GNA     Y WR CS
Sbjct: 286 RFFDKASIVTNPNELNEDGNAK----YKWRLCS 314


>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1188

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 608 LQELINLRSQHLNGPLVYVNPVWLFIGP 525
           L EL+++   H N P   V P++L++ P
Sbjct: 86  LDELVHIMKSHKNNPSHMVFPIFLYVDP 113


>At1g32320.1 68414.m03981 mitogen-activated protein kinase kinase
           (MAPKK), putative (MKK10) mitogen-activated protein
           kinase kinase (MAPKK) family, PMID:12119167
          Length = 305

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 168 KSQFICACFGIFTT*IIVQKAMSVSEKVSLSDALSNVDVLDE 293
           +S FI  C+ +F +   +   M + EK SL DAL    V  E
Sbjct: 98  ESSFIIKCYAVFVSLYDLCFVMELMEKGSLHDALLAQQVFSE 139


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,102,089
Number of Sequences: 28952
Number of extensions: 251266
Number of successful extensions: 587
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)