Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B19
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   0.98 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   3.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.2  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
          protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 33 ALVLCGLLAAVSAAPQYY 86
          A++LC  L AVSAA   Y
Sbjct: 6  AVILCAFLVAVSAAENKY 23


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 27  MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPLQLL 137
           MI L+    + AVSAAP  ++ S    Y H D   +L
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLDVESIL 34


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 50  TAGGGLGRATVLPWLVTLAVSPLRPPSAPYVRESMLDTH 166
           T+ GG+    VLP   T   SP    ++PY+ +S L  H
Sbjct: 694 TSPGGM----VLPSPSTSVASPSVSVASPYMLQSPLTPH 728


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 50  TAGGGLGRATVLPWLVTLAVSPLRPPSAPYVRESMLDTH 166
           T+ GG+    VLP   T   SP    ++PY+ +S L  H
Sbjct: 586 TSPGGM----VLPSPSTSVASPSVSVASPYMLQSPLTPH 620


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 143 ERKELKGVVMVIRPM*RAMVVLWRGRDRRQ 54
           ERK +K   ++I P   AM ++   +DRR+
Sbjct: 118 ERKVMKNFAILIIPTCVAMFIVPYFQDRRE 147


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 132  LLTFGKACWTHIR 170
            LL    ACW H+R
Sbjct: 1551 LLDLDPACWYHLR 1563


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 157 GHTFALVQPCQRN 195
           GHTF L  P Q +
Sbjct: 261 GHTFQLADPAQHD 273


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 395 NLPWDVNSEXSWV 433
           N  WDV+S  SW+
Sbjct: 187 NAWWDVHSTGSWL 199


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 127 FSSLRSGKHVGHTFALVQPCQRNAT 201
           F  LR    VGH FA+    ++N T
Sbjct: 3   FKLLRLVLKVGHFFAITPGFRKNRT 27


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 127 FSSLRSGKHVGHTFALVQPCQRNAT 201
           F  LR    VGH FA+    ++N T
Sbjct: 3   FKLLRLVLKVGHFFAITPGFRKNRT 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,518
Number of Sequences: 336
Number of extensions: 2317
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)