Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B19
         (540 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502...    33   0.15 
04_03_0672 + 18559984-18559986,18560096-18560569,18560666-185608...    31   0.44 
04_04_0347 + 24564589-24565296                                         29   2.4  
03_06_0522 - 34494989-34495045,34495171-34495234,34495378-344954...    29   3.1  
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152...    27   7.2  
06_01_0825 + 6233525-6233740,6234274-6234461,6234544-6234668,623...    27   7.2  
09_02_0610 - 11206198-11206588,11206812-11207001,11207116-112071...    27   9.6  
02_02_0231 - 8091431-8092900                                           27   9.6  

>01_01_0659 -
           5021159-5021266,5021364-5021494,5021619-5021785,
           5021950-5022065,5022226-5022381,5022570-5022678,
           5023153-5023262,5023807-5023992,5024077-5024667
          Length = 557

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 245 IINEGRVEGDKYXISIHLPGYXQKDINVK 331
           ++ E +VEGD Y + +H PG+  K ++V+
Sbjct: 220 VVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248


>04_03_0672 +
           18559984-18559986,18560096-18560569,18560666-18560836,
           18561494-18561640
          Length = 264

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 20  HENDRLSVVRTAGGGLGRATVLPW-LVTLAVSPLRP--PSAPYVRESMLDTHSLWSNLAN 190
           H    LS  R  GGG+G A   P+ +V  + SP +P  PS P  R S + T    ++   
Sbjct: 80  HRRHSLSQQREVGGGIGSAPRSPYRMVHGSASPAQPNNPSKPKHRSSGMQTPERRASSEG 139

Query: 191 EMQH 202
             QH
Sbjct: 140 HGQH 143


>04_04_0347 + 24564589-24565296
          Length = 235

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 27  MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDP 125
           M  L+   LLAA SAA   +H  ++ PY HH+ P
Sbjct: 5   MSMLLASSLLAAASAARADHHSPAYAPYPHHHAP 38


>03_06_0522 -
           34494989-34495045,34495171-34495234,34495378-34495494,
           34495878-34496032,34496221-34496319,34496464-34496593,
           34496727-34496866,34497050-34497239,34497346-34497547,
           34497589-34497631
          Length = 398

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 528 RSSQWGSATGLLLSSGCFCFS 466
           + S+WG+ TG LLS  C+C +
Sbjct: 98  QQSKWGNKTGPLLSGICYCIA 118


>11_06_0645 -
           25814302-25814759,25814853-25815005,25815032-25815214,
           25815342-25815531,25815624-25815784,25816136-25816623,
           25817035-25817075
          Length = 557

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +2

Query: 245 IINEGRVEGDKYXISIHLPGYXQKDINVKAKNGVLMVQANSAFNHYLKIQNLP 403
           I ++G++EG +  I  H+P     D+ V + +   +   +S   H  K  N P
Sbjct: 351 ISSKGQLEGIQVVIDPHVPSVESVDMPVSSMDNSTLEVFSSQQQHSFKCNNTP 403


>06_01_0825 +
           6233525-6233740,6234274-6234461,6234544-6234668,
           6234858-6234917,6235043-6235074
          Length = 206

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 463 PAEAKAARG*QEASCRAPLRRPL 531
           P+ A+A  G  EA CR+PLRRPL
Sbjct: 29  PSAAEAIVGSPEA-CRSPLRRPL 50


>09_02_0610 -
           11206198-11206588,11206812-11207001,11207116-11207184,
           11207546-11207672,11207809-11208128,11208196-11208353,
           11208503-11208580,11209484-11209555,11209994-11210135,
           11212580-11213064,11214362-11214947,11215093-11215177
          Length = 900

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +2

Query: 89  WLVTLAVSPLRPPSAPYVRESMLDTHSLWSNLA--NEMQHLDNMMKELSLKFPXIINEG 259
           W +   VS   PP  P  +++   T   WS+L      Q     +K  +L F   I +G
Sbjct: 549 WFMQKPVSTFDPPRVPDPKKAPGSTTDHWSHLPINGSRQFTYEELKNFTLNFQRFIGQG 607


>02_02_0231 - 8091431-8092900
          Length = 489

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +1

Query: 157 GHTFALV--QPCQRNATL-GQHDEGAVVEVPXHYKRRTRGRRQVSXIYSP 297
           GH F  V   P   +A   G HDE  +  VP  +  RTRGR      ++P
Sbjct: 311 GHRFLWVVRMPSLNDAHRNGGHDEDPLAWVPDGFLERTRGRGLAVAAWAP 360


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,051,758
Number of Sequences: 37544
Number of extensions: 272871
Number of successful extensions: 851
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)