Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B19
         (540 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical ...    27   6.5  
Z68303-8|CAA92640.2|  273|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    27   8.6  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 36  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 125
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/68 (23%), Positives = 34/68 (50%)
 Frame = -3

Query: 454 FQHVFXVNPAAFGIHIPGKVLYFQVMIKSTVSLHHQHSIFRFHVDVFLXVTRQVNRYXIL 275
           F+H+    P  F   +   + Y Q  + + VSL+    +F++  ++F  + +++    IL
Sbjct: 78  FRHIGNFLPLTFMGTMAYHMAYVQYALTTLVSLNRLTVLFKY--NIFEPIWKKITWLFIL 135

Query: 274 VAFHASFV 251
           VA+   F+
Sbjct: 136 VAYFVPFL 143


>AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/68 (23%), Positives = 34/68 (50%)
 Frame = -3

Query: 454 FQHVFXVNPAAFGIHIPGKVLYFQVMIKSTVSLHHQHSIFRFHVDVFLXVTRQVNRYXIL 275
           F+H+    P  F   +   + Y Q  + + VSL+    +F++  ++F  + +++    IL
Sbjct: 78  FRHIGNFLPLTFMGTMAYHMAYVQYALTTLVSLNRLTVLFKY--NIFEPIWKKITWLFIL 135

Query: 274 VAFHASFV 251
           VA+   F+
Sbjct: 136 VAYFVPFL 143


>Z68303-8|CAA92640.2|  273|Caenorhabditis elegans Hypothetical
           protein ZK809.7 protein.
          Length = 273

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 374 NHYLKIQNLPWDV-NSEXSWVYXKDVLKITFPLKQK 478
           NH   I ++ +D  N E  W   +DV+ +T+P  +K
Sbjct: 155 NHQPTISSINYDTQNRELMWHAFRDVILLTYPFIEK 190


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -2

Query: 479 AFASAGR*FSTRLXXKPSCXRNSHPREGSVFSSND 375
           AF + G  F  R    P      HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,382,274
Number of Sequences: 27780
Number of extensions: 215031
Number of successful extensions: 522
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)