Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B14
         (537 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DXK8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.2  
UniRef50_A0Y6V3 Cluster: Putative uncharacterized protein; n=1; ...    32   9.6  
UniRef50_A7IAC6 Cluster: Putative uncharacterized protein; n=1; ...    32   9.6  

>UniRef50_A2DXK8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 909

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -1

Query: 396 NIIAYSCIIYRYRTKDNTSQTVLWQSSVMACGASYHRRPEIRVDKSL*IKRNALPFNKTA 217
           N++ Y+ I +    KD   Q  L+   ++    SY   PE R+DK   IKRN L    TA
Sbjct: 686 NVLNYTKIAF----KDPKDQRPLFAVDILYALCSYSIAPEKRIDKDRRIKRNTLDHQTTA 741


>UniRef50_A0Y6V3 Cluster: Putative uncharacterized protein; n=1;
           Alteromonadales bacterium TW-7|Rep: Putative
           uncharacterized protein - Alteromonadales bacterium TW-7
          Length = 192

 Score = 31.9 bits (69), Expect = 9.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 388 CILLYYLSLSDKRQHLADSSVAKQRNGLWG 299
           C+ LYY S S++ Q      + K R G+WG
Sbjct: 109 CLRLYYASQSEREQDRLARKIRKLRKGIWG 138


>UniRef50_A7IAC6 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Methanoregula boonei 6A8|Rep: Putative
           uncharacterized protein - Methanoregula boonei (strain
           6A8)
          Length = 151

 Score = 31.9 bits (69), Expect = 9.6
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -1

Query: 384 YSCIIYRYRTKDNTSQTVLWQSSVMACGASYHRRPEIRVDKSL*IK-RNALPFNKT 220
           Y   +Y +  KD  +   L Q     CG   + RP +RVD+ L     N   FN+T
Sbjct: 43  YGIAVYLFFEKDLATDRTLVQVEAEFCGVPEYERPYVRVDRFLSFTLENDPSFNRT 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,375,473
Number of Sequences: 1657284
Number of extensions: 7560545
Number of successful extensions: 14843
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14843
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)