Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B12
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0628 + 21357876-21359921                                         30   1.4  
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714...    29   3.2  
10_07_0152 + 13439178-13439517,13440072-13440229,13440431-134404...    28   5.6  
04_04_1551 - 34348110-34348225,34348468-34348606,34348658-343488...    28   7.5  
02_05_0895 - 32593155-32593190,32594228-32594279,32594544-325945...    27   9.9  
01_01_0278 - 2281536-2281977,2282523-2282926                           27   9.9  

>12_02_0628 + 21357876-21359921
          Length = 681

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 463 LPDMTDFKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEM 639
           L   T  KY+      +A+ A+WQM Q V D       + K+ +  + + V +P R ++
Sbjct: 362 LEGYTTCKYLNVVWDNEANAARWQMTQ-VSDSFPSEEEFKKWLQVAEKNGVRVPTRQDV 419


>02_05_0942 +
           32970537-32970581,32971059-32971113,32971300-32971417,
           32971567-32971615,32971637-32971723,32971890-32971970,
           32972074-32972181,32972432-32972503,32973218-32973250
          Length = 215

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/52 (23%), Positives = 27/52 (51%)
 Frame = +1

Query: 232 YAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVTT 387
           + E   P   +Y++K+   +ID    + + ++   A++ PY  +  ++ VTT
Sbjct: 162 FVESSLPVIEYYNAKDKVKKIDAAKPIPEVFEDVKAIFAPYAPNALLSGVTT 213


>10_07_0152 +
           13439178-13439517,13440072-13440229,13440431-13440477,
           13441115-13441178,13441600-13442237,13442328-13442562
          Length = 493

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 169 DKGSPPQWSPVYTVKGLLNIPYAELHEP 252
           D GS  +W P+    G +N P   LH P
Sbjct: 391 DSGSTSEWRPLIKKYGYVNCPTVRLHIP 418


>04_04_1551 -
           34348110-34348225,34348468-34348606,34348658-34348896,
           34349042-34349140,34349207-34350188,34350737-34350832,
           34350936-34351064,34351253-34351332,34351420-34351661,
           34351743-34352692
          Length = 1023

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 89  DLRRSAVESCYSLRCCVFSWPSHLDMSIK 175
           D+  S V+ C + +C V  WPSHL   I+
Sbjct: 356 DIYDSGVDDCSNPKCYVM-WPSHLSTHIR 383


>02_05_0895 -
           32593155-32593190,32594228-32594279,32594544-32594584,
           32594795-32594906,32595195-32595268,32595349-32595587,
           32595710-32596678,32596725-32596878,32596957-32597244,
           32597393-32597534,32598679-32598752,32598870-32598890
          Length = 733

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 217 LLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVT 384
           +L    + L  PF+ W ++    SR+ Y G M+  + F  A    +  S+KI   T
Sbjct: 426 MLKATASRLFGPFFDWIETWEMISRLKYLGTMLFLHNFQQA----FTWSLKIVTAT 477


>01_01_0278 - 2281536-2281977,2282523-2282926
          Length = 281

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +1

Query: 421 VNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQMVQPVGDKLNKY 570
           +N  +D   D+Q +   M  F   G      A T +W     VGD  N Y
Sbjct: 54  MNHFRDLELDVQQIENGMVPFPVYGAAAAGGAFTLQWDGAHGVGDFRNAY 103


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,778,704
Number of Sequences: 37544
Number of extensions: 375443
Number of successful extensions: 916
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)