Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_B12
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 6e-33
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 6e-24
SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40) 81 8e-16
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_39190| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_1137| Best HMM Match : CC (HMM E-Value=2) 35 0.067
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_12939| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_44881| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_40469| Best HMM Match : Crystallin (HMM E-Value=8.3) 30 1.9
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 29 2.5
SB_21778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_16195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 5.8
SB_57456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13) 28 5.8
SB_1909| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 137 bits (332), Expect = 6e-33
Identities = 65/158 (41%), Positives = 89/158 (56%)
Frame = +1
Query: 178 SPPQWSPVYTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYG 357
+PP W YT+ G+L +PYAE+ EPF AW+D +SRIDYYGGM T+Q + G
Sbjct: 337 TPPTWPQEYTLTGVLRLPYAEIEEPFQAWFDGGRKRSRIDYYGGMDSTFQRGDIL--TAG 394
Query: 358 TSIKIAPVTTETEMNXETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQM 537
+ +I P++TET++N +C Q N T QSVLPD+ F ++G T D + W+
Sbjct: 395 ANFRICPMSTETKLNVRSCFQTNGTSASPVGPQSVLPDLAKFSFVGNSTYGDVKCSIWEY 454
Query: 538 VQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFN 651
VG K NKYTM+ P P+ YEM GF+
Sbjct: 455 KLTVGHKRNKYTMYTSM------HDPPAPIHYEMLGFD 486
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 107 bits (258), Expect = 6e-24
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
Frame = +1
Query: 172 KGSPPQWSPV-----YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTS 336
+ +PP P Y G L +P++++ EPF W+ +++++SRIDYY G +T+Q
Sbjct: 37 RSAPPPMKPFHFPRNYHATGKLQLPHSKIEEPFEVWFSAQHNRSRIDYYYGTDRTFQ--R 94
Query: 337 AVYPPYGTSIKIAPVTTETEMNXETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 516
A P+G + KI P+ T+ + C + T+ +Q ++P+MTDFK+ G E A
Sbjct: 95 ADVGPHGEAFKIVPIYTDEKGGYIGCWHLEGTERTPIVVQPIVPNMTDFKFAGYEVYHGA 154
Query: 517 DTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
TAKW+ +N +T+WV P PVRYEMKG+++
Sbjct: 155 STAKWEYRYLAFGLMNAHTIWVTTA------DPPRPVRYEMKGYDN 194
>SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)
Length = 1198
Score = 81.0 bits (191), Expect = 8e-16
Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Frame = +1
Query: 202 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPV 381
Y G L++PY + EPF +WY + SRIDYY GM KT+Q + YG +K+ P
Sbjct: 1020 YHAIGTLHLPYDNIREPFESWYARDYNMSRIDYYYGMDKTFQRGDLM--DYGVLVKVVPA 1077
Query: 382 ----TTETEMNXETCLQVNSTQDQLQDIQSVLP-DMTDFKYIGTETMQDADTAKWQMVQP 546
+ + N +C + Q QSVLP + FK+IG E T K+Q
Sbjct: 1078 HWGRDEDLDKNTISCWYRPGFRWSQQRGQSVLPAHLEHFKFIGEEIRSGMPTFKYQRNTT 1137
Query: 547 VGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
+ K N YT W+ K + P+RY M G+++
Sbjct: 1138 IFHKKNSYTFWMTKAKPHR------PLRYVMHGYDT 1167
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 202 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMV 315
Y V+G L++PY E+ EPF AWY + SRIDYY G V
Sbjct: 878 YRVQGTLSLPYDEIVEPFEAWYAGDYNMSRIDYYYGKV 915
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 202 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPV 381
Y G+L++PY ++ EPF WY + SRIDYYGGM +TYQ YG + KI P
Sbjct: 39 YHATGVLSLPYGDIKEPFEVWYSGLHGMSRIDYYGGMDRTYQ--RGDLGKYGYACKIVPE 96
Query: 382 TTE-TEMNXETCLQVNSTQDQLQDIQSVLPDMTDFK 486
+E T + CL + QS++P FK
Sbjct: 97 FSELTGRTFKGCLHRRGNSNFQIKAQSIIPSPKFFK 132
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +1
Query: 202 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQ 327
Y G+L +P +E++EPF W+ +++SRIDYYGG VKTYQ
Sbjct: 902 YHATGVLRLPTSEVNEPFEIWFSRPHNQSRIDYYGGDVKTYQ 943
>SB_39190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 202 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGG 309
Y V+G L++PY E+ EPF AWY + SRIDYY G
Sbjct: 72 YRVQGTLSLPYDEIVEPFEAWYAGDYNMSRIDYYYG 107
>SB_1137| Best HMM Match : CC (HMM E-Value=2)
Length = 410
Score = 34.7 bits (76), Expect = 0.067
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +1
Query: 355 GTSIKIAP---VTTETEMNXETCLQVNSTQDQLQDIQSVLP-DMTDFKYIGTETMQDADT 522
G KI P V T ++ N +C + QSV+P ++T+FK + ET + +
Sbjct: 196 GMLFKIVPMHYVVTPSDKNIISCWYKPLATWLPRAGQSVVPTNLTEFKMVAIETHRGHPS 255
Query: 523 AKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFN 651
++Q +K N Y +W+ K + P+R+EM G++
Sbjct: 256 FRFQRKFSELNKTNTYILWITTHKPHR------PLRFEMIGYD 292
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 367 KIAPVTTETEMNXETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTA 525
K++PV T+ E + + Q +++DI ++ D+ D KY ADT+
Sbjct: 4087 KLSPVGTDVETIEQQMDDLKELQKEVEDIDELIADLNDQKYRVALQNPTADTS 4139
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 493 GTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
G E + + AKW+ + +K+N YT++ + PVRYEM G+++
Sbjct: 3 GHEDFRGKNCAKWEHSFNIYNKVNTYTLYTTPSRPY------TPVRYEMMGYDT 50
>SB_12939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 463 LPDMTDFKYIGTET-MQDADTAKWQMVQPVGDKLN--KYTMWVKYXKTLKGDSVPIPVRY 633
LP +D K+ T Q ++ KW P N T+ V+Y G S+ +PVRY
Sbjct: 186 LPSPSDIKWSVPYTPRQISNDIKWSDPYPPRQISNGRSLTLSVRYQMISNGRSLTLPVRY 245
Query: 634 EMKG 645
+M G
Sbjct: 246 QMIG 249
>SB_44881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 481 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
F+Y G + D KW V K NKY + KT P+P+R EM G+++
Sbjct: 51 FQYAGEALIHDTLCTKWVYNISVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDT 102
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 363 YKDRSGHNGNRDEQX---DVPASQFDARSAPRHPVSATGHDRF*IYRHRNNAGCRHGQMA 533
Y+DR H RD D +F R+ S HD IYR R+N G R+ +
Sbjct: 141 YEDRERHQRGRDRHHRDRDDSGCRFRDNEGKRY--SDLRHDGDKIYRDRDNEGKRNRDAS 198
Query: 534 DG 539
DG
Sbjct: 199 DG 200
>SB_40469| Best HMM Match : Crystallin (HMM E-Value=8.3)
Length = 339
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 481 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
F+Y G + D KW V K NKY + KT P+P+R EM G+++
Sbjct: 46 FQYAGEALIDDTLCTKWVYNISVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDT 97
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 481 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
F+Y G + D +W V K NKY + K D P+P+R EM G+N+
Sbjct: 1078 FQYAGEALIYDTLCTEWVYNISVMHKDNKYVFY-----NTKTDP-PLPMRLEMDGYNT 1129
>SB_21778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 47 SYFKYFSTIFRDHLDLRRSAVESCYS-LRCCVFSWPSHL 160
S+F F + H L R V +C S LRC VF++ S+L
Sbjct: 83 SHFSLFDDVVFSHPSLLRCRVCTCQSCLRCRVFTFQSYL 121
>SB_16195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 481 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
F Y G + D KW V K NKY + KT P+P+R EM G+++
Sbjct: 40 FHYAGEALIHDTLCTKWVYNISVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDT 91
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 169 DKGSPPQWSPVYTVKGLLNI 228
DKGSPPQ+S + + +LNI
Sbjct: 451 DKGSPPQYSEITVIVKVLNI 470
>SB_57456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 481 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
F+Y G + D KW V K NKY + KT P+P+R EM G+++
Sbjct: 6 FQYSGEALIHDTLCTKWVCNIFVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDT 57
>SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13)
Length = 317
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 418 QVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQM--VQPVGDKLNKYTMWV 582
Q T + QD +S ++D KYIG + + T +W + +P +L+ + WV
Sbjct: 153 QEGYTGELCQDCKSPPIGISDEKYIGNSRIAGSSTGQWVLDYFEPYKGRLHGPSSWV 209
>SB_1909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 481 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYXKTLKGDSVPIPVRYEMKGFNS 654
F+Y G + D +W V K NKY + KT P+P+R EM G+++
Sbjct: 6 FQYAGETLIDDTLCTEWVYNISVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDT 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,709,770
Number of Sequences: 59808
Number of extensions: 436668
Number of successful extensions: 1387
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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