Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_B12
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z48245-1|CAA88290.1| 356|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 29 2.2
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 29 2.2
U97017-4|AAB52358.1| 156|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical ... 28 5.0
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +1
Query: 226 IPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPP-YGTSIKIAPVTTETEMN 402
IP+ ++ + ++K ++ +G V+ YQ T + PP Y +S P E+
Sbjct: 456 IPFGQVEQQPIPMNPFGSAKPTVNKFGMKVEPYQTTDYMLPPGYPSSSIYLPQPAYPEVK 515
Query: 403 XETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADT 522
+ + ++STQ Q +P T T+ D +
Sbjct: 516 PNSSVILSSTQSQNNTSPQTIPASASVTNSATSTVVDTSS 555
>Z48245-1|CAA88290.1| 356|Caenorhabditis elegans Hypothetical
protein T27D1.3 protein.
Length = 356
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = -3
Query: 536 ICHLAVS--ASCIVSVPIYLKSVMSGSTDWMSWS*SCVELTCRHVS-LFISVSVVTGAI 369
+ +LAV+ A+ I ++P ++ V GSTDW+ S C CR++ +F+ S+ T I
Sbjct: 57 LLNLAVADLANLIFTIPEWIPPVFFGSTDWLFPSFLCP--VCRYLECVFLFASISTQMI 113
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1
Query: 232 YAELHEPFYAWYDSKN-----SKSRI-DYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTET 393
++EL + FY ++ SKN S S I D G T FT+A + I ++ +
Sbjct: 24 HSELRKSFYEFFKSKNHEILRSSSVIPDENDG---TLLFTNAGMNQFKPLI-LSSTESRR 79
Query: 394 EMNXETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 516
N + C++ + L D+ L T F+ +G + DA
Sbjct: 80 VANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDA 120
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1
Query: 232 YAELHEPFYAWYDSKN-----SKSRI-DYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTET 393
++EL + FY ++ SKN S S I D G T FT+A + I ++ +
Sbjct: 24 HSELRKSFYEFFKSKNHEILRSSSVIPDENDG---TLLFTNAGMNQFKPLI-LSSTESRR 79
Query: 394 EMNXETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 516
N + C++ + L D+ L T F+ +G + DA
Sbjct: 80 VANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDA 120
>U97017-4|AAB52358.1| 156|Caenorhabditis elegans Hypothetical
protein F47B3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -2
Query: 366 YRSTVGWVDR*RELVSLDHTSIVIDS*FAVLTVVPSIEWLMQFS----IGYI*ESLYCVY 199
Y + VGW + TS++ F V+ +PSI W++ S I E +YC
Sbjct: 22 YYTGVGWATFVSSVGIFVTTSLLTLYLFRVVDTLPSINWIVCLSTRTEIIIFQEMVYCFA 81
Query: 198 WT 193
WT
Sbjct: 82 WT 83
>AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical
protein F13B6.3 protein.
Length = 432
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 602 FKVXLYLTHIVYLFSLSPTGCTICHLAVSASCIVSV 495
+ V L LFS SP+G TI ++ V A + S+
Sbjct: 123 YMVELVKDRFAVLFSKSPSGSTITNITVDADTVFSI 158
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 406 ETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAK 528
+TCLQ S+Q++ +Q V+P +F G+ + + ++ +
Sbjct: 318 KTCLQAESSQNKSSSMQPVMPVKIEFLLTGSVSQKISEAER 358
>AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical
protein E02H9.6 protein.
Length = 460
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 57 NIFQLFLEIT*IYVGRRSNHVIRCVVVFFRGLRIWICR*RVATTMESSIHSKGTPKYT 230
N+FQ+FLE+ + G RS V++ +GL C V + S +SK PKYT
Sbjct: 137 NLFQIFLELFTLSSGCRSCQVLK-TSTLGKGLP---CGRDVEGVWKGSRNSKCKPKYT 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,075,431
Number of Sequences: 27780
Number of extensions: 321843
Number of successful extensions: 906
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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