Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B06
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067608-8|AAC17647.1|  432|Caenorhabditis elegans Eukaryotic in...   134   4e-32
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    32   0.41 
Z30662-2|CAA83135.1|  181|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U39652-2|AAA80404.1|  817|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81042-5|CAD44090.1|  331|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81042-4|CAB02796.1|  272|Caenorhabditis elegans Hypothetical pr...    28   5.0  
CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z47069-1|CAA87338.1|  964|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical...    27   8.8  
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    27   8.8  

>AF067608-8|AAC17647.1|  432|Caenorhabditis elegans Eukaryotic
           initiation factor protein3.E protein.
          Length = 432

 Score =  134 bits (325), Expect = 4e-32
 Identities = 66/190 (34%), Positives = 117/190 (61%), Gaps = 3/190 (1%)
 Frame = +3

Query: 90  SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
           S FDLT ++  +LD HL+ PLLEF+  +  YD+  L +   ++L+KTNMID V +     
Sbjct: 2   STFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIET---- 57

Query: 270 YPEEDTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPK---TLINHL 440
           Y  +  P  I  ++  ++ E  EL+  V  V+ +++  +V + ++  R+      ++ HL
Sbjct: 58  YNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNVRILEHL 117

Query: 441 STNKEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLAS 620
           + N  + F ++M+D++++ +K+ YECGNY  ++  LY+ + +++  D NYL+ L+GKLAS
Sbjct: 118 TQN--HNFTVDMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLAS 175

Query: 621 EILVQNWDGA 650
           EIL+Q W+ A
Sbjct: 176 EILLQEWEHA 185


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 18/77 (23%), Positives = 38/77 (49%)
 Frame = -3

Query: 482  IDHFNFKLILLVCRKMVYKSFRIPHGFNCFHYIISLHESQYWLYCILKFLQFRKNYTSPL 303
            ++H + K I   C + V ++    H F  +++++ +  S+Y +  I+  LQ+    TS  
Sbjct: 2727 VEHHDLKRIKSACVQSVRRAVAFSHAFRVWNWLLRMVSSEYSVSDII--LQYLTTLTS-- 2782

Query: 302  YNXFRSVFFRIEHSSDV 252
            YN      F  + +S++
Sbjct: 2783 YNRLAEYMFSAKKNSNI 2799


>Z30662-2|CAA83135.1|  181|Caenorhabditis elegans Hypothetical
           protein T16H12.2 protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 207 KLEILSKTNMIDYVTDIRRMLYPEEDTPEXIIQRRGVVLSELQELQDAVXP 359
           K  I+ +T    +V  +  +LYP++DTP  I++ R   L   Q+ +D   P
Sbjct: 110 KHHIVCRTCQQSHVKAVCPILYPKKDTPPKILRARRRSLIRAQKKKDFQEP 160


>U39652-2|AAA80404.1|  817|Caenorhabditis elegans Hypothetical
           protein R07E4.5 protein.
          Length = 817

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 126 LDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTP 290
           L R ++  L EF    +TY   E L+AKLE  +   + +    ++    PE+D+P
Sbjct: 408 LRRPVILRLREFDKDDKTYYDEETLKAKLEEHAVKKLEEEKDKLQSAAAPEDDSP 462


>Z81042-5|CAD44090.1|  331|Caenorhabditis elegans Hypothetical
           protein C27H6.4b protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 450 KEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLASEIL 629
           K Y+   + ID ++RLAK+  E GN VE         +++    K Y +  W   ++  L
Sbjct: 130 KRYDAGEKSIDVLWRLAKFCNEIGNRVEKDKRK---DIIVE--GKKYATEAWNTDSNNFL 184

Query: 630 VQNW 641
              W
Sbjct: 185 AARW 188


>Z81042-4|CAB02796.1|  272|Caenorhabditis elegans Hypothetical
           protein C27H6.4a protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 450 KEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDKNYLSVLWGKLASEIL 629
           K Y+   + ID ++RLAK+  E GN VE         +++    K Y +  W   ++  L
Sbjct: 71  KRYDAGEKSIDVLWRLAKFCNEIGNRVEKDKRK---DIIVE--GKKYATEAWNTDSNNFL 125

Query: 630 VQNW 641
              W
Sbjct: 126 AARW 129


>CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical
           protein C42C1.7 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 365 QYWLYCILKFLQFRKNYTSPLYNXFRSVFFRIEHSSDVSNIIYHVSFAQN 216
           ++  YC+L  +     +TSP    F SVF RI     +  I+Y + F ++
Sbjct: 170 KFGYYCLLGVISISYYFTSPQTTAFNSVFARIWQFL-IGMIVYLIYFKKS 218


>Z47069-1|CAA87338.1|  964|Caenorhabditis elegans Hypothetical protein
            F36G3.1 protein.
          Length = 964

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
 Frame = +3

Query: 192  ELLQAK-LEILSKTNMIDYVTDIRRMLYPEEDTPEXIIQRRGVVLSELQELQDAVXPVL- 365
            E++Q K  E+      +  V +I   L  + D+ + I+QR+  ++  L+E  DA+   L 
Sbjct: 723  EIVQRKDQELAILKEKVTNVINIENSLKDDVDSQKVIVQRQKEIIENLREELDAITKKLG 782

Query: 366  RLMQRDDVMKTIETMRDPKTLINHLSTNKEYEFKIEMIDSMYRLAKYR 509
             + +  D      T+   K +      ++E +  +E+ D    L K +
Sbjct: 783  EVTKLRDKAVEEATLYKMKNMERDRFLSREAQMSMEIEDLQRELNKQK 830


>Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical
           protein K01C8.8 protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 483 SMYRLAKYRYECGNYVESASYLYFCQLVMSPT-DKNYLSVLWGKLASEILVQ 635
           S Y + +YR +  ++  S S+LY  +L   P+   N   V W K   +I+++
Sbjct: 298 STYVIPEYRLDYYDFEGSNSFLYDIRLSQDPSIAGNVAIVFWNKKLKQIILK 349


>AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32b protein.
          Length = 216

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 633 VPKFR*PIYPKEPTNNSCQLATSPVD 556
           V +FR P Y  +PT+NS  L   P+D
Sbjct: 47  VGQFRRPRYSADPTSNSTDLQLRPLD 72


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 633 VPKFR*PIYPKEPTNNSCQLATSPVD 556
           V +FR P Y  +PT+NS  L   P+D
Sbjct: 215 VGQFRRPRYSADPTSNSTDLQLRPLD 240


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,388,376
Number of Sequences: 27780
Number of extensions: 283449
Number of successful extensions: 795
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)