Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_B06
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.0  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   7.9  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 530 HIISTFIAIFGQTIHAIDHFNFKLILLVCRKMVYKS 423
           HI+S         I AI +    LIL+ CRK V KS
Sbjct: 37  HIVSIVFYSVLMIISAIGNTTV-LILITCRKRVSKS 71


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 58  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 198
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 348 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 395


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 58  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 198
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 386 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 433


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 429 INHLSTNKEYEFKI 470
           +NHL T+ EY++++
Sbjct: 761 VNHLLTHHEYDYEL 774


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -3

Query: 341 KFLQFRKNYTSPLYNXFRSVFFRIEHSSDV 252
           K +    NY +  YN ++ +++ I +   V
Sbjct: 88  KTIHNNNNYNNNNYNNYKKLYYNINYIEQV 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,083
Number of Sequences: 438
Number of extensions: 3696
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)