Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_B05
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 204 3e-53
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 127 6e-30
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 52 3e-07
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 52 3e-07
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 52 3e-07
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 52 3e-07
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 48 6e-06
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 48 6e-06
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 7e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 7e-05
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 40 0.002
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 40 0.002
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 40 0.002
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 40 0.002
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 40 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.002
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 39 0.004
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 35 0.058
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 31 0.71
AF025469-4|AAG00032.1| 270|Caenorhabditis elegans Hypothetical ... 30 1.2
Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical pr... 30 1.6
U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical pr... 30 1.6
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 29 2.9
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 29 2.9
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 29 2.9
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 29 3.8
U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical p... 28 5.0
L11247-1|AAA28010.2| 484|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF025463-2|AAB71006.1| 387|Caenorhabditis elegans Serpentine re... 27 8.8
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 204 bits (499), Expect = 3e-53
Identities = 97/145 (66%), Positives = 109/145 (75%)
Frame = +2
Query: 206 KPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGI 385
+P+E IRNIGISAHIDSGKTT+TERIL+Y GRID MHEV+GKD+VGA MD M+LERQRGI
Sbjct: 39 RPIERIRNIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGI 98
Query: 386 TIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
TIQSAATY W NINIIDTPGHV FTV R C V GVQSQT TVNR
Sbjct: 99 TIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNR 158
Query: 566 QMKRYNVPCLAFINKLDRLXANPXR 640
Q+ RYNVP + F+NK+DR A P +
Sbjct: 159 QLARYNVPFICFVNKMDRNGATPLK 183
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 127 bits (307), Expect = 6e-30
Identities = 65/137 (47%), Positives = 83/137 (60%)
Frame = +2
Query: 221 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 400
+RNIG+ AH+D+GKTT+TER+L+ G I H D V D +++ER+RGIT+QSA
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAI---HVAGHVDKGNTVTDFLDIERERGITVQSA 81
Query: 401 ATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRY 580
A WK H IN+IDTPGHV F V R GVQ QTLTV RQ ++
Sbjct: 82 AVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQSSKF 141
Query: 581 NVPCLAFINKLDRLXAN 631
+P FINK+D+L AN
Sbjct: 142 KLPAHFFINKMDKLAAN 158
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 76.6 bits (180), Expect = 1e-14
Identities = 45/143 (31%), Positives = 73/143 (51%)
Frame = +2
Query: 188 VKYAEHKPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMEL 367
V +E P + IRN GI AH+D GK+TL +R+L G + + ++D +++
Sbjct: 32 VNLSEFTP-DKIRNFGIVAHVDHGKSTLADRLLEMCGAVPPGQK--------QMLDKLQV 82
Query: 368 ERQRGITIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQ 547
ER+RGIT+++ + + +N+IDTPGHV F+ R + GVQ+Q
Sbjct: 83 ERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQ 142
Query: 548 TLTVNRQMKRYNVPCLAFINKLD 616
T+ N+ + INK+D
Sbjct: 143 TIANFWLAFEKNIQIIPVINKID 165
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/142 (33%), Positives = 72/142 (50%)
Frame = +2
Query: 197 AEHKPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQ 376
A KP E+IRN+ + AH+D GKT+ + ++ I + GK MDS E E+
Sbjct: 12 AATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISS--RMAGKLRY---MDSREDEQT 66
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLT 556
RGIT++S+ + + IN+ID+PGHV F+ + G+ SQT
Sbjct: 67 RGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEA 126
Query: 557 VNRQMKRYNVPCLAFINKLDRL 622
+ RQ+ R + INK+DRL
Sbjct: 127 LIRQVIRNGQAMILVINKIDRL 148
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/142 (33%), Positives = 72/142 (50%)
Frame = +2
Query: 197 AEHKPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQ 376
A KP E+IRN+ + AH+D GKT+ + ++ I + GK MDS E E+
Sbjct: 12 AATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISS--RMAGKLRY---MDSREDEQT 66
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLT 556
RGIT++S+ + + IN+ID+PGHV F+ + G+ SQT
Sbjct: 67 RGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEA 126
Query: 557 VNRQMKRYNVPCLAFINKLDRL 622
+ RQ+ R + INK+DRL
Sbjct: 127 LIRQVIRNGQAMILVINKIDRL 148
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ I IID PGH F
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDF 98
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ I IID PGH F
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDF 98
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ I IID PGH F
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDF 98
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ I IID PGH F
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDF 98
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 221 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 400
+RN+ I+ H+ GKTT + ++ T + +D D + +E+QRG +I+S
Sbjct: 132 MRNVAIAGHLHHGKTTFLDCLMEQT----HPEFYRAEDADARFTDILFIEKQRGCSIKSQ 187
Query: 401 ATYTIW-----KEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+ K + +NIIDTPGHV F+ + GV T R
Sbjct: 188 PVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIR 247
Query: 566 QMKRYNVPCLAFINKLDRL 622
+ + I+K+DRL
Sbjct: 248 HAIQERLAVTLCISKIDRL 266
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 221 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 400
+RN+ I+ H+ GKTT + ++ T + +D D + +E+QRG +I+S
Sbjct: 7 MRNVAIAGHLHHGKTTFLDCLMEQT----HPEFYRAEDADARFTDILFIEKQRGCSIKSQ 62
Query: 401 ATYTIW-----KEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+ K + +NIIDTPGHV F+ + GV T R
Sbjct: 63 PVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIR 122
Query: 566 QMKRYNVPCLAFINKLDRL 622
+ + I+K+DRL
Sbjct: 123 HAIQERLAVTLCISKIDRL 141
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQMH--------EVKGKDN--VGAVMDSMELERQ 376
N+ H+D+GK+T+ +++F TG +D+ + KG+++ + MD+ + ER+
Sbjct: 111 NMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEERE 170
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
+G T++ Y ++ + I+D PGH F
Sbjct: 171 KGKTVEVGRAYFETEKRHFTILDAPGHKSF 200
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.4 bits (100), Expect = 7e-05
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 23/157 (14%)
Frame = +2
Query: 218 NIRNIGISAHIDSGKTTLTERILFYTGRI----------------DQMHEVKGKDNVGAV 349
NIRN+ + AH+D GK+TLT+ ++ G I +Q + K ++
Sbjct: 18 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISL 77
Query: 350 ---MDSMELERQRGI----TIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXX 508
++ +LE +G T++ + IN+ID+PGHV F+
Sbjct: 78 FFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGA 137
Query: 509 XXXXCSVXGVQSQTLTVNRQMKRYNVPCLAFINKLDR 619
V GV QT TV RQ + + F+NK+DR
Sbjct: 138 LVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDR 174
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.4 bits (100), Expect = 7e-05
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 23/157 (14%)
Frame = +2
Query: 218 NIRNIGISAHIDSGKTTLTERILFYTGRI----------------DQMHEVKGKDNVGAV 349
NIRN+ + AH+D GK+TLT+ ++ G I +Q + K ++
Sbjct: 18 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISL 77
Query: 350 ---MDSMELERQRGI----TIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXX 508
++ +LE +G T++ + IN+ID+PGHV F+
Sbjct: 78 FFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGA 137
Query: 509 XXXXCSVXGVQSQTLTVNRQMKRYNVPCLAFINKLDR 619
V GV QT TV RQ + + F+NK+DR
Sbjct: 138 LVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDR 174
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +2
Query: 215 ENIRNIGISAHIDSGKTTLTERILFYTGRIDQM------HEV--KGKDNVGA--VMDSME 364
+++ N+ + H+D+GK+TL +L +D HE GK + V+D E
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 365 LERQRGITIQSAATYTIWKEHNINIIDTPGHVXF 466
ER+RG+T+ T I ++D PGH F
Sbjct: 228 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDF 261
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +2
Query: 215 ENIRNIGISAHIDSGKTTLTERILFYTGRIDQM------HEV--KGKDNVGA--VMDSME 364
+++ N+ + H+D+GK+TL +L +D HE GK + V+D E
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 365 LERQRGITIQSAATYTIWKEHNINIIDTPGHVXF 466
ER+RG+T+ T I ++D PGH F
Sbjct: 246 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDF 279
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/131 (29%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSAAT 406
N+G HID GKTTLT I + +K + +D + E++RGITI A
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDE-----IDKGKEEKKRGITINVAHI 101
Query: 407 YTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYNV 586
+ D PGH F + GV QT K+ V
Sbjct: 102 GYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAKQVGV 161
Query: 587 PCLA-FINKLD 616
+A FINK D
Sbjct: 162 KNMAIFINKAD 172
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS-AA 403
N+G H+D GKTTLT I K +D +D+ E+ RGITI +
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED-----IDNAPEEKARGITINAFHL 105
Query: 404 TYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYN 583
Y K H + ID PGH + + G QT ++
Sbjct: 106 EYETAKRHYAH-IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVG 164
Query: 584 VP---CLAFINKLDRL 622
VP + F+NK+D +
Sbjct: 165 VPLDNIVVFMNKVDEV 180
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS-AA 403
N+G H+D GKTTLT I K +D +D+ E+ RGITI +
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED-----IDNAPEEKARGITINAFHL 106
Query: 404 TYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYN 583
Y K H + ID PGH + + G QT ++
Sbjct: 107 EYETAKRHYAH-IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVG 165
Query: 584 VP---CLAFINKLDRL 622
VP + F+NK+D +
Sbjct: 166 VPLDNIVVFMNKVDEV 181
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS-AA 403
N+G H+D GKTTLT I K +D +D+ E+ RGITI +
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED-----IDNAPEEKARGITINAFHL 106
Query: 404 TYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYN 583
Y K H + ID PGH + + G QT ++
Sbjct: 107 EYETAKRHYAH-IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVG 165
Query: 584 VP---CLAFINKLDRL 622
VP + F+NK+D +
Sbjct: 166 VPLDNIVVFMNKVDEV 181
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/131 (29%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSAAT 406
N+G HID GKTTLT I + +K + +D + E++RGITI A
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDE-----IDKGKEEKKRGITINVAHI 101
Query: 407 YTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYNV 586
+ D PGH F + GV QT K+ V
Sbjct: 102 GYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAKQVGV 161
Query: 587 PCLA-FINKLD 616
+A FINK D
Sbjct: 162 KNMAIFINKAD 172
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +2
Query: 380 GITIQSAA-TYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLT 556
GIT A + + K + +DTPGH F R + GV+ QT
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQ 247
Query: 557 VNRQMKRYNVPCLAFINKLDRLXANPXR 640
+ K NV + +NK+D+ A+P R
Sbjct: 248 SIKFAKDANVQLVVAVNKIDKPNADPMR 275
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Frame = +2
Query: 131 KNTKKSSVFQIELQKYSSHVKYAEHKPLENIRN--IGISAHIDSGKTTLTERILFYTGRI 304
K T + + +I+L+ ++ +N+R+ I + H+D+GKT + + I +
Sbjct: 452 KETVEERMERIKLRIAKRKEVAQANRSTDNLRSPVICVLGHVDTGKTKMLDTIR--RTNV 509
Query: 305 DQMHEVKGKDNVGAVMDSMELERQRGITIQSAATYTIWKEHNINIIDTPGHVXFTVXXXR 484
Q +GA E ++R ++ + K IIDTPGH F+ R
Sbjct: 510 QQGEAGGITQQIGATEVPAEAIKERCRQVRGFLQDQM-KIPGFLIIDTPGHESFSNLRTR 568
Query: 485 XXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 622
+ G++ QT+ + + + P + +NK+DRL
Sbjct: 569 GSSLCDFAILVVDIMHGLEPQTIESLKLLIKGKTPFVIALNKIDRL 614
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERI 283
N+GI H+DSGKTTLT RI
Sbjct: 15 NLGILGHVDSGKTTLTRRI 33
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERI 283
N+GI H+DSGKTTLT RI
Sbjct: 15 NLGILGHVDSGKTTLTRRI 33
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQ 310
NI + H+DSGK+T T +++ G ID+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 36
>AF025469-4|AAG00032.1| 270|Caenorhabditis elegans Hypothetical
protein W09B6.5 protein.
Length = 270
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 483 EH*XFXMGRYWCCVLXVVFRAKL 551
+H F RYWCC +FR K+
Sbjct: 179 DHFIFTFYRYWCCFFCTLFRVKI 201
>Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical
protein F25H9.5 protein.
Length = 504
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 119 INALKNTKKSSVFQIELQKYSSHVKYAEHKPLENIRNIGISAHIDSGKTTLTERILFYTG 298
+ A N ++ ++ K+S + E L N GI +I+SGKT T+++LF+
Sbjct: 54 LRATHNQSTETLGSPKVVKFSIYFSRGER--LSNEEENGIELNIESGKTADTKKLLFHLA 111
Query: 299 R 301
+
Sbjct: 112 K 112
>U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical
protein F52E4.8 protein.
Length = 382
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 129 LKIQKNRVYFKLSYRNIH---HMSNMQNTNHWKIFEILV 236
+KI+ N++ F + NI+ H T HW++F +LV
Sbjct: 335 VKIKPNKIIFASLHCNINSGVHRETRTLTGHWRVFRVLV 373
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 132 KIQKNRVYFKLSYRNIHHMSNMQNTNHWKIFEILVYQL 245
+I N VY +L NIH +S++ NT+H ++L Y L
Sbjct: 1036 QIGLNHVYGQLVSNNIHSVSDLANTSH---LDLLAYGL 1070
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 132 KIQKNRVYFKLSYRNIHHMSNMQNTNHWKIFEILVYQL 245
+I N VY +L NIH +S++ NT+H ++L Y L
Sbjct: 1041 QIGLNHVYGQLVSNNIHSVSDLANTSH---LDLLAYGL 1075
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 132 KIQKNRVYFKLSYRNIHHMSNMQNTNHWKIFEILVYQL 245
+I N VY +L NIH +S++ NT+H ++L Y L
Sbjct: 1041 QIGLNHVYGQLVSNNIHSVSDLANTSH---LDLLAYGL 1075
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = -2
Query: 400 SRLYCNSSLTFQLH*VHNSTNIVFTFNLVHLVYSSSIEQNTFSECCLSRVYVS*YTNISN 221
S ++C S V N T+ +F N VH V + I + F+ C++ V +N+
Sbjct: 523 STIFCGSWYPENFTNVDNFTSTIFPINYVH-VNPAEIHKGYFAYHCVTLVKEMRLSNVEG 581
Query: 220 IFQWFVFCIFDM 185
F IF++
Sbjct: 582 YFMMADDAIFNI 593
>U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical
protein C32B5.15 protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +3
Query: 135 IQKNRVYF---KLSYRNIHHMSNMQNTNHWKIFEIL 233
++ N ++F +S + IHH SN++N NH + E++
Sbjct: 154 LKSNIIFFWKQGMSQQKIHHFSNIRNVNHIILSEMV 189
>L11247-1|AAA28010.2| 484|Caenorhabditis elegans Hypothetical
protein F09G8.5 protein.
Length = 484
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 266 LSFQS-LCELIYQYFEYFPMVCVLHI*HVMNISVTQFEIHSIFL 138
++FQS L LI F +F ++ L H + S F+ HS+FL
Sbjct: 17 IAFQSVLLPLILHLFSFF-LLSFLSFLHFRSFSANNFKHHSLFL 59
>AF025463-2|AAB71006.1| 387|Caenorhabditis elegans Serpentine
receptor, class t protein54 protein.
Length = 387
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 273 LNVFCSILDE*TKCTRLKVKTMLVL 347
LN+FCSI TKCT + ML L
Sbjct: 56 LNIFCSIAIIYTKCTHPSTQLMLFL 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,095,690
Number of Sequences: 27780
Number of extensions: 292257
Number of successful extensions: 785
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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