Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_B05
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 203 9e-53
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 203 9e-53
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 145 3e-35
At5g13650.1 68418.m01584 elongation factor family protein contai... 86 2e-17
At5g13650.2 68418.m01585 elongation factor family protein contai... 85 5e-17
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 83 2e-16
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 74 7e-14
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 71 5e-13
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 61 7e-10
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 59 3e-09
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 52 3e-07
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 50 1e-06
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 49 2e-06
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 47 1e-05
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 47 1e-05
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 46 2e-05
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 46 2e-05
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 46 2e-05
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 46 2e-05
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 46 2e-05
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 46 2e-05
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 44 7e-05
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 44 7e-05
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 44 9e-05
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 43 2e-04
At2g27700.1 68415.m03356 eukaryotic translation initiation facto... 36 0.018
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 36 0.031
At1g65910.1 68414.m07479 no apical meristem (NAM) family protein... 29 2.7
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 28 4.7
At3g26250.1 68416.m03275 DC1 domain-containing protein contains ... 28 6.2
At4g09420.1 68417.m01551 disease resistance protein (TIR-NBS cla... 27 8.2
At2g46480.1 68415.m05785 glycosyl transferase family 8 protein c... 27 8.2
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 203 bits (495), Expect = 9e-53
Identities = 92/143 (64%), Positives = 115/143 (80%)
Frame = +2
Query: 212 LENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITI 391
++ +RNIGISAHIDSGKTTLTER+LFYTGRI ++HEV+G+D VGA MDSM+LER++GITI
Sbjct: 62 MDKLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITI 121
Query: 392 QSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQM 571
QSAATY WK++ +NIIDTPGHV FT+ R CSV GVQSQ++TV+RQM
Sbjct: 122 QSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQM 181
Query: 572 KRYNVPCLAFINKLDRLXANPXR 640
+RY VP +AFINKLDR+ A+P +
Sbjct: 182 RRYEVPRVAFINKLDRMGADPWK 204
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 203 bits (495), Expect = 9e-53
Identities = 92/143 (64%), Positives = 115/143 (80%)
Frame = +2
Query: 212 LENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITI 391
++ +RNIGISAHIDSGKTTLTER+LFYTGRI ++HEV+G+D VGA MDSM+LER++GITI
Sbjct: 62 MDKLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITI 121
Query: 392 QSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQM 571
QSAATY WK++ +NIIDTPGHV FT+ R CSV GVQSQ++TV+RQM
Sbjct: 122 QSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQM 181
Query: 572 KRYNVPCLAFINKLDRLXANPXR 640
+RY VP +AFINKLDR+ A+P +
Sbjct: 182 RRYEVPRVAFINKLDRMGADPWK 204
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 145 bits (351), Expect = 3e-35
Identities = 77/141 (54%), Positives = 93/141 (65%)
Frame = +2
Query: 209 PLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGIT 388
PL++ RNIGI AHID+GKTT TERIL+YTGR ++ EV A MD ME E++RGIT
Sbjct: 92 PLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGT---ATMDWMEQEQERGIT 148
Query: 389 IQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQ 568
I SAAT T W +H INIIDTPGHV FT+ R SV GV+ Q+ TV RQ
Sbjct: 149 ITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQ 208
Query: 569 MKRYNVPCLAFINKLDRLXAN 631
+Y VP + F+NK+DRL AN
Sbjct: 209 ADKYGVPRICFVNKMDRLGAN 229
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 85.8 bits (203), Expect = 2e-17
Identities = 54/152 (35%), Positives = 78/152 (51%)
Frame = +2
Query: 179 SSHVKYAEHKPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDS 358
+S VK + +N+RNI I AH+D GKTTL + +L ++ + ++V + +MDS
Sbjct: 68 ASEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSML-RQAKVFRDNQVMQE----RIMDS 122
Query: 359 MELERQRGITIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGV 538
+LER+RGITI S T +K +NIIDTPGH F R SV G
Sbjct: 123 NDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGP 182
Query: 539 QSQTLTVNRQMKRYNVPCLAFINKLDRLXANP 634
QT V ++ + + +NK+DR A P
Sbjct: 183 MPQTRFVLKKALEFGHAVVVVVNKIDRPSARP 214
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 84.6 bits (200), Expect = 5e-17
Identities = 54/152 (35%), Positives = 77/152 (50%)
Frame = +2
Query: 179 SSHVKYAEHKPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDS 358
S VK + +N+RNI I AH+D GKTTL + +L ++ + ++V + +MDS
Sbjct: 69 SVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSML-RQAKVFRDNQVMQE----RIMDS 123
Query: 359 MELERQRGITIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGV 538
+LER+RGITI S T +K +NIIDTPGH F R SV G
Sbjct: 124 NDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGP 183
Query: 539 QSQTLTVNRQMKRYNVPCLAFINKLDRLXANP 634
QT V ++ + + +NK+DR A P
Sbjct: 184 MPQTRFVLKKALEFGHAVVVVVNKIDRPSARP 215
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 83.0 bits (196), Expect = 2e-16
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Frame = +2
Query: 209 PLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGIT 388
P+ NIRN I AHID GK+TL +++L TG V+ +D +D+M+LER+RGIT
Sbjct: 82 PISNIRNFSIIAHIDHGKSTLADKLLQVTG------TVQNRDMKEQFLDNMDLERERGIT 135
Query: 389 I--QSAATYTIWKE--HNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLT 556
I Q+A ++++ +N+IDTPGHV F+ R + GV++QTL
Sbjct: 136 IKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLA 195
Query: 557 VNRQMKRYNVPCLAFINKLDRLXANPXR 640
N+ + +NK+D A P +
Sbjct: 196 NVYLALENNLEIIPVLNKIDLPGAEPEK 223
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 74.1 bits (174), Expect = 7e-14
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Frame = +2
Query: 209 PLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGIT 388
P E IRN I AHID GK+TL +R++ TG I + H G +L+R+RGIT
Sbjct: 62 PSEKIRNFSIIAHIDHGKSTLADRLMELTGTIKKGH--------GQPQYLDKLQRERGIT 113
Query: 389 IQSAATYTIWKEHNI----------NIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGV 538
++ A T T++ E+ + N+IDTPGHV F+ R + GV
Sbjct: 114 VK-AQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQGV 172
Query: 539 QSQTLTVNRQMKRYNVPCLAFINKLDRLXANPXR 640
Q+QT+ N+ + INK+D+ A+P R
Sbjct: 173 QAQTVANFYLAFEANLTIVPVINKIDQPTADPER 206
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 71.3 bits (167), Expect = 5e-13
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = +2
Query: 221 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 400
+RNI I AH+D GKTTL + ++ +G + GK MD ++ E++R IT++S+
Sbjct: 9 VRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRF---MDYLDEEQRRAITMKSS 65
Query: 401 ATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRY 580
+ +K++++N+ID+PGH+ F +V GV QT V RQ
Sbjct: 66 SISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQAWIE 125
Query: 581 NV-PCLAFINKLDRL 622
+ PCL +NK+DRL
Sbjct: 126 KLTPCLV-LNKIDRL 139
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 60.9 bits (141), Expect = 7e-10
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRIDQ--MHEV--------KGKDNVGAVMDSMELERQ 376
N+ I H+DSGK+TL+ R+L GRI Q MH+ KG +D ER+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERE 300
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGIT+ A Y K H++ ++D+PGH F
Sbjct: 301 RGITMTVAVAYFNSKRHHVVLLDSPGHKDF 330
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 58.8 bits (136), Expect = 3e-09
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Frame = +2
Query: 218 NIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 397
NIRN+ + AH+D GK+TLT+ ++ G I Q EV G + D+ E +RGITI+S
Sbjct: 18 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQ--EVAGDVRM---TDTRADEAERGITIKS 72
Query: 398 AATYTIWK----------------EHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSV 529
++ E+ IN+ID+PGHV F+ +
Sbjct: 73 TGISLYYEMTDESLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCI 132
Query: 530 XGVQSQTLTVNRQMKRYNVPCLAFINKLDR 619
GV QT TV RQ + + +NK+DR
Sbjct: 133 EGVCVQTETVLRQALGERIRPVLTVNKMDR 162
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 52.0 bits (119), Expect = 3e-07
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Frame = +2
Query: 215 ENIRN--IGISAHIDSGKTTLTERILFYTGRIDQMHEVKG-KDNVGAVMDSMELERQRGI 385
EN+R+ I H+DSGKT L + I G Q E G +GA E R+R
Sbjct: 489 ENLRSPICCIMGHVDSGKTKLLDCI---RGTNVQEGEAGGITQQIGATFFPAENIRERTK 545
Query: 386 TIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+Q+ A K I +IDTPGH FT R + G++ QT+
Sbjct: 546 ELQANAKL---KVPGILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLN 602
Query: 566 QMKRYNVPCLAFINKLDRL 622
++R NV + +NK+DRL
Sbjct: 603 LLRRRNVKFIIALNKVDRL 621
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 50.4 bits (115), Expect = 1e-06
Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 1/178 (0%)
Frame = +2
Query: 92 MTISYAFRLINALKNTKKSSVFQIELQKYSSHVKYAEHKPLENIRNIGISAHIDSGKTTL 271
+T+S +F +L T S + ++ K+ KP NI IG H+D GKTTL
Sbjct: 39 LTLSSSFLPSYSLTTTSASQSTRRSFTVRAARGKFERKKPHVNIGTIG---HVDHGKTTL 95
Query: 272 TERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSAATYTIWKEHNINIIDTP 451
T + I K D + A + ER RGITI +A + + +D P
Sbjct: 96 TAALTMALASIGS-SVAKKYDEIDAAPE----ERARGITINTATVEYETENRHYAHVDCP 150
Query: 452 GHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYNVP-CLAFINKLDRL 622
GH + G QT K+ VP + F+NK D++
Sbjct: 151 GHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQV 208
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID----QMHEVKGKDN------VGAVMDSMELERQ 376
N+ H+D+GK+T+ +ILF +G++D Q +E + KD + +MD+ E ER
Sbjct: 103 NVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEERL 162
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGH 457
+G T++ + + I+D PGH
Sbjct: 163 KGKTVEVGRAHFETESTRFTILDAPGH 189
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = +2
Query: 221 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 400
+RN+ + H+ GKT + ++ T + + K + ++ D+ E++R I+I++
Sbjct: 138 VRNVALVGHLQHGKTVFMDMLVEQTHHMSTFN-AKNEKHM-KYTDTRVDEQERNISIKAV 195
Query: 401 ATYTIW-----KEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+ K + NI+DTPGHV F+ + GV T R
Sbjct: 196 PMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIR 255
Query: 566 QMKRYNVPCLAFINKLDRL 622
+ ++P + INK+DRL
Sbjct: 256 HAIQDHLPIVVVINKVDRL 274
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = +2
Query: 221 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 400
+RN+ + H+ GKT + ++ T + + K + ++ D+ E++R I+I++
Sbjct: 138 VRNVALVGHLQHGKTVFMDMLVEQTHHMSTFN-AKNEKHM-KYTDTRVDEQERNISIKAV 195
Query: 401 ATYTIW-----KEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+ K + NI+DTPGHV F+ + GV T R
Sbjct: 196 PMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIR 255
Query: 566 QMKRYNVPCLAFINKLDRL 622
+ ++P + INK+DRL
Sbjct: 256 HAIQDHLPIVVVINKVDRL 274
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 46.4 bits (105), Expect = 2e-05
Identities = 43/149 (28%), Positives = 59/149 (39%), Gaps = 2/149 (1%)
Frame = +2
Query: 176 YSSHVKYAEHKPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMD 355
+ S + +KP N+ IG H+D GKTTLT I E K K +D
Sbjct: 55 WRSMATFTRNKPHVNVGTIG---HVDHGKTTLTAAITKVLA-----EEGKAKAIAFDEID 106
Query: 356 SMELERQRGITIQSA-ATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVX 532
E++RGITI +A Y K H + +D PGH +
Sbjct: 107 KAPEEKKRGITIATAHVEYETAKRHYAH-VDCPGHADYVKNMITGAAQMDGGILVVSGPD 165
Query: 533 GVQSQTLTVNRQMKRYNVPCL-AFINKLD 616
G QT ++ VP L F+NK+D
Sbjct: 166 GPMPQTKEHILLARQVGVPSLVCFLNKVD 194
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEVKGKDNVGA-VMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ + A V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ +ID PGH F
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDF 98
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 221 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 400
+RN+ + H+ GKT + ++ T R+ + K D+ E++R I+I++
Sbjct: 124 VRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHM--RYTDTRVDEQERNISIKAV 181
Query: 401 ATYTIW-----KEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+ K + NI+DTPG+V F+ + GV T R
Sbjct: 182 PMSLVLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIR 241
Query: 566 QMKRYNVPCLAFINKLDRL 622
+ ++P + INK+DRL
Sbjct: 242 HAIQDHLPIVVVINKVDRL 260
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEVKGKDNVGA-VMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ + A V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ +ID PGH F
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDF 98
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEVKGKDNVGA-VMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ + A V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ +ID PGH F
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDF 98
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Frame = +2
Query: 227 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEVKGKDNVGA-VMDSMELERQ 376
NI + H+DSGK+T T +++ G ID + E+ + A V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 377 RGITIQSAATYTIWKEHNINIIDTPGHVXF 466
RGITI A ++ +ID PGH F
Sbjct: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDF 98
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 44.4 bits (100), Expect = 7e-05
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +2
Query: 215 ENIRN--IGISAHIDSGKTTLTERILFYTGRIDQMHEVKG-KDNVGAVMDSMELERQRGI 385
EN+R+ I H+D+GKT L + I G Q E G +GA E R+R
Sbjct: 701 ENLRSPICCIMGHVDTGKTKLLDCI---RGTNVQEGEAGGITQQIGATYFPAENIRERTK 757
Query: 386 TIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+++ A K + +IDTPGH FT R + G++ QT+
Sbjct: 758 ELKADAKL---KVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIESLN 814
Query: 566 QMKRYNVPCLAFINKLDRL 622
++ N + +NK+DRL
Sbjct: 815 LLRMRNTEFIVALNKVDRL 833
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 44.4 bits (100), Expect = 7e-05
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +2
Query: 215 ENIRNI--GISAHIDSGKTTLTERILFYTGRIDQMHEVKG-KDNVGAVMDSMELERQRGI 385
EN+R+I I H+DSGKT L + I G Q E G +GA + R+R
Sbjct: 634 ENLRSIICCIMGHVDSGKTKLLDCI---RGTNVQEGEAGGITQQIGATYFPAKNIRERTR 690
Query: 386 TIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+++ A K + +IDTPGH FT R G++ QT+
Sbjct: 691 ELKADAKL---KVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIKHGLEPQTIESLN 747
Query: 566 QMKRYNVPCLAFINKLDRL 622
++ N + +NK+DRL
Sbjct: 748 LLRMRNTEFIIALNKVDRL 766
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 44.0 bits (99), Expect = 9e-05
Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Frame = +2
Query: 215 ENIRNI--GISAHIDSGKTTLTERILFYTGRIDQMHEVKG-KDNVGAVMDSMELERQRGI 385
E +R+I I H+DSGKT L + I G Q E G +GA + R+R
Sbjct: 42 EKLRSIICCIMGHVDSGKTKLLDCI---RGTNVQEGEAGGITQQIGATYFPAKNIRERTR 98
Query: 386 TIQSAATYTIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNR 565
+++ A K + +IDTPGH FT R G+Q QT+
Sbjct: 99 ELKADAKL---KVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQTIESLN 155
Query: 566 QMKRYNVPCLAFINKLDRL 622
++ N + +NK+DRL
Sbjct: 156 LLRMRNTEFIIALNKVDRL 174
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +2
Query: 428 NINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYNVPCLAFIN 607
+I +DTPGH F+ R + GV QTL + NVP + IN
Sbjct: 269 SITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVVVAIN 328
Query: 608 KLDRLXANPXR 640
K D+ ANP +
Sbjct: 329 KCDKPGANPEK 339
>At2g27700.1 68415.m03356 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|P39730 Translation initiation factor IF-2
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00009: Elongation factor Tu GTP binding domain,
PF03144: Elongation factor Tu domain 2
Length = 479
Score = 36.3 bits (80), Expect = 0.018
Identities = 32/126 (25%), Positives = 53/126 (42%)
Frame = +2
Query: 245 HIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSAATYTIWKE 424
HID+GKT L + I TG + + +GA S ++ + ++S T K
Sbjct: 44 HIDTGKTKLLDYI---TGNVQEGEAGGTTQKMGATYLSARNILEKTMELKSD---TKLKV 97
Query: 425 HNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYNVPCLAFI 604
IDTPG+ +T R + G++ QT+ ++ N + +
Sbjct: 98 PRPLFIDTPGYEFYTNLRSRGLGLCDFAILVVDIMHGLEPQTIECLNLLRMKNTEFIIAL 157
Query: 605 NKLDRL 622
NK+DRL
Sbjct: 158 NKVDRL 163
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 35.5 bits (78), Expect = 0.031
Identities = 35/137 (25%), Positives = 51/137 (37%)
Frame = +2
Query: 230 IGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSAATY 409
I I H+D GKTTL + I + +V + G +GI +
Sbjct: 504 ITIMGHVDHGKTTLLDYI--------RKSKVAASEAGGIT---------QGIGAYKVSVP 546
Query: 410 TIWKEHNINIIDTPGHVXFTVXXXRXXXXXXXXXXXXCSVXGVQSQTLTVNRQMKRYNVP 589
K + +DTPGH F R + G++ QT K VP
Sbjct: 547 VDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVP 606
Query: 590 CLAFINKLDRLXANPXR 640
+ INK+D+ A+P R
Sbjct: 607 IVIAINKIDKEGASPDR 623
>At1g65910.1 68414.m07479 no apical meristem (NAM) family protein
similar to jasmonic acid 2 GI:6175246 from [Lycopersicon
esculentum]; similar to NAC2 (GI:6456751) {Arabidopsis
thaliana}
Length = 631
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/105 (20%), Positives = 47/105 (44%)
Frame = +2
Query: 143 KSSVFQIELQKYSSHVKYAEHKPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEV 322
+++V +++Q++ HV + E + +EN+R +G+S+ + K+ + E +
Sbjct: 344 EANVEAVDMQEH--HVNFKEERLVENLRWVGVSSK-ELEKSFVEEHSTVIPIEDIWRYHN 400
Query: 323 KGKDNVGAVMDSMELERQRGITIQSAATYTIWKEHNINIIDTPGH 457
++ D M++ G + EHN N++D H
Sbjct: 401 DNQEQEHHDQDGMDVNNNNGDVDDAFTLEFSENEHNENLLDKNDH 445
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 122 NALKNTKK-SSVFQIELQKYSSHVKYAEHKPLENIRNIGISAHIDSGKTTLTERILFYTG 298
N+L NT+ S +E S+ + + K N+G ++D+ KT ++ + TG
Sbjct: 386 NSLDNTQTVKSKVSVETTSNVSNAQTVKPKA-----NVGAKRNLDNTKTLKSKSSVGTTG 440
Query: 299 RIDQMHEVKGKDNVG 343
+ VK K NVG
Sbjct: 441 NLANTEAVKSKVNVG 455
>At3g26250.1 68416.m03275 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 490
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 472 YCEXYMSWSINNVNVMFLPNSVCCSRLYCNS 380
Y + SWSI+ +++ LPN + SR C+S
Sbjct: 406 YLKPRSSWSISRGSLLILPNFMGISRPICSS 436
>At4g09420.1 68417.m01551 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.2
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +2
Query: 89 KMTISYAF--RLINALKNTKKSSVFQIELQKYSSHVKYAEHKPLENIRNIGISAHIDSGK 262
K TIS+ + IN+L TK + ++ + + + + K E +R IGI GK
Sbjct: 182 KATISHTVSNKQINSL-TTKNVGLIGLDRHMLALN-ELLDLKSNEEVRLIGICGQGGVGK 239
Query: 263 TTLTERILFYTGRIDQMHEVKGKDNVGAV--MDSMELERQRGIT 388
TTL + Y H DN G + D+ E Q+ +T
Sbjct: 240 TTLARYV--YEELFKNFHAHVFVDNAGKIYKQDTDESHSQKSLT 281
>At2g46480.1 68415.m05785 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8;
Length = 528
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 269 LTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSAATYTIWK 421
L ER L R+++ +E+ D++ +++ + R R + YTIWK
Sbjct: 35 LHERSLRQEKRLERANELMNDDSLQK-LETAAMARSRSVDSAPLGNYTIWK 84
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,750,438
Number of Sequences: 28952
Number of extensions: 248748
Number of successful extensions: 680
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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