Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_B02
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 239 3e-64
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 198 6e-52
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 180 1e-46
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 177 1e-45
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 141 7e-35
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 113 2e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 105 4e-24
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 88 9e-19
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 59 5e-10
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 1.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.8
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.3
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.1
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 3.1
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 26 4.1
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 5.4
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 25 7.2
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.5
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 9.5
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 9.5
SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24 |Schiz... 25 9.5
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 239 bits (584), Expect = 3e-64
Identities = 111/158 (70%), Positives = 122/158 (77%)
Frame = +1
Query: 88 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 267
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 268 FTNHNGTGGKSIYGNKFEXENFTLKHTGPGVLSMANAGADTNGSQFFITTVXTSCLDGRH 447
FT NGTGGKSIYG KF ENF LKH PG+LSMANAG +TNGSQFFITTV T LDG+H
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 448 VVFGNVVEGMEVVKXIETFGSQSGKTSXRIVIKDCGXI 561
VVFG V EGM+VVK +E+ GS SG T RIVI CG +
Sbjct: 125 VVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 198 bits (483), Expect = 6e-52
Identities = 93/146 (63%), Positives = 107/146 (73%)
Frame = +1
Query: 58 NTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRV 237
N G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRV
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
Query: 238 IPNFMLQGGDFTNHNGTGGKSIYGNKFEXENFTLKHTGPGVLSMANAGADTNGSQFFITT 417
IPNFM+QGGD T +GTGGKSIYG++F ENF L H PG+LSMANAG D+NGSQFFITT
Sbjct: 80 IPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITT 139
Query: 418 VXTSCLDGRHVVFGNVVEGMEVVKXI 495
V T LDG HVVFG V+ G ++VK I
Sbjct: 140 VKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 180 bits (439), Expect = 1e-46
Identities = 89/160 (55%), Positives = 110/160 (68%), Gaps = 4/160 (2%)
Frame = +1
Query: 88 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 255
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 256 QGGDFTNHNGTGGKSIYGNKFEXENFTLKHTGPGVLSMANAGADTNGSQFFITTVXTSCL 435
QGGDFT NGTGG+SIYG KFE ENF LKH P +LSMANAG +TNGSQFFITTV T L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 436 DGRHVVFGNVVEGMEVVKXIETFGSQSGKTSXRIVIKDCG 555
DG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 126 DGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 177 bits (431), Expect = 1e-45
Identities = 88/167 (52%), Positives = 110/167 (65%), Gaps = 8/167 (4%)
Frame = +1
Query: 79 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 240
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 241 PNFMLQGGDFTNHNGTGGKSIYGNK-FEXENFTLKHTGPGVLSMANAGADTNGSQFFITT 417
FM+QGGDF + +GTG +I+ ++ F ENFTLKH PG+LSMANAG D+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 418 VXTSCLDGRHVVFGNVVEGMEVVKXIE-TFGSQSGKTSXRIVIKDCG 555
V LDG+HVVFG V+EG ++VK IE T + + + I +CG
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECG 171
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 141 bits (342), Expect = 7e-35
Identities = 72/125 (57%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +1
Query: 118 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 297
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 298 SIYGNKFEXE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVXTSCLDGRHVVFGNVVEG 474
SIYG+KF+ E + L HTG G+LSMANAG +TN SQFFIT T LDG+H +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 475 MEVVK 489
+ V K
Sbjct: 126 LSVCK 130
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 113 bits (273), Expect = 2e-26
Identities = 62/127 (48%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +1
Query: 121 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 300
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 301 IYGNKFEXE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVXTSCLDGRHVVFGNVVEGM 477
I+ FE E + LKH P +SMAN+G +TNGSQFFITT T LDG+H +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 478 EVVKXIE 498
+VV IE
Sbjct: 580 DVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 105 bits (253), Expect = 4e-24
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Frame = +1
Query: 121 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 300
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 301 IYGNKFEXENFT-LKHTGPGVLSMANAGADTNGSQFFITTVXTSCLDGRHVVFGNVVEGM 477
I+G F+ E LKH G++SMAN G +TNGSQFFI LD +H +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 478 EVVKXIETFGSQS 516
V+ +E + S
Sbjct: 401 NVLDALEKVPTNS 413
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 88.2 bits (209), Expect = 9e-19
Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +1
Query: 121 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 300
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 301 IYGNKFEXENF-TLKHTGPGVLSMANAGADTNGSQFFITTVXTSCLDGRHVVFGNVV 468
IYG F E L+ G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 59.3 bits (137), Expect = 5e-10
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Frame = +1
Query: 109 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 288
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 289 GGKSIYG--NK----FEXE-NFTLKHTGPGVLSMANAGADTN-------GSQFFIT-TVX 423
GG+ ++ NK F+ E N +L H G++SM+ A + GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 424 TSCLDGRHVVFGNVVEGME-VVKXIETFGSQSGKTSXRIVIK 546
LD R+ ++G V EG + ++K + + G+ I IK
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIK 164
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 212 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLXTRISPLSTLDLASS 364
+RA S++S I KE +P+ITA SP +A S + ISP + + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 1.8
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 89 SSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 268
+STS ++P S + S P TS C + S+ S +S+PI+ T
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPT-TSTSCTTS--TSIPTGGSSSLSTPITPTVPPT 254
Query: 269 SPTITALGESPSTAISLXTRISPLST 346
S + T++ P++ S T SPL T
Sbjct: 255 STSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +2
Query: 89 SSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 268
+STS ++P S + S P TS C + T S+ S+PI+ T
Sbjct: 141 TSTSSTSIPIPPTSTSSTDTNSNPLPT-TSTSCTTSTSIPPTGGSSSL-STPITPTVPPT 198
Query: 269 SPTITALGESPSTAISLXTRISPLST 346
S + T++ P++ S T SPL T
Sbjct: 199 STSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 173 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLXTRISPLST 346
TS C + T S+ S+PI+ TS + T++ P++ S T +PL T
Sbjct: 111 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 97 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 192
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 393 WFPVLHHHC 419
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 521 FPDWLPKVSXCLTTSMPSTTFPKTTCLPS 435
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = -1
Query: 555 TTVFDNDSXRGLPRLAAKGLNXLDNFHAFNNIPKDNMSAIQAGGXDSGDEELG 397
T VFD + +L+ ++ +DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -1
Query: 273 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 94
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 93 EEYS 82
E++S
Sbjct: 937 EDHS 940
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 488 LTTSMPSTTFPKTTCLPSRQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 339
LT +P TTF T +P +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Frame = -2
Query: 218 PL*PKPFSPVH---RAR-----KFSHVL-GVTSLLSSITIFPSGASSTVTSKNT 84
P PKP +PV+ R + S+VL +TS SS+T PS + +T+ S T
Sbjct: 312 PSPPKPNNPVYLPPRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTT 365
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 124 KIVIELRSDVTPKTC-ENFRAL 186
++++ L SD+ PK C NF+AL
Sbjct: 1135 QLMLRLHSDIYPKICISNFKAL 1156
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = -1
Query: 420 DSGDEELGTISISTGISHGEDARSSVLKG------EILVFKLIAVDGLSPS 286
+S EL + IS+G+DA S VLK E++V + LSPS
Sbjct: 246 NSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCRKFLHHSLSPS 296
>SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +1
Query: 217 GSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEXENFTLKHTGPGVLSMANAGADTN 393
G I H+ +PN M Q + G Y + + E+ + GV+ +++ D N
Sbjct: 67 GQIMHQEVPNSMAQYSFTVKNPGKYMYCFYNDALDGESKEVLFNVHGVIYISDEDLDAN 125
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,750,128
Number of Sequences: 5004
Number of extensions: 59010
Number of successful extensions: 211
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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