Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A23
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
 Frame = +2

Query: 398 ISIHGRESNNL--ARILQTYYET------SHHPSLIWACVPMLC 505
           I ++ ++++NL  +++L TY +       SH P   W C+   C
Sbjct: 22  IYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTWQCINQRC 65


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 495 LCYVVQHIXNALKMMN 542
           +CY+ QH+  ++K+ N
Sbjct: 226 ICYLHQHLSKSVKLFN 241


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -2

Query: 99  YVFITTRYFLLC-HFFY 52
           Y F+   +FLLC ++FY
Sbjct: 134 YYFVVPLFFLLCIYYFY 150


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 495 LCYVVQHIXNALKMMN 542
           +CY+ QH+  ++K+ N
Sbjct: 244 ICYLHQHLSKSVKLFN 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,830
Number of Sequences: 336
Number of extensions: 3339
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)