Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A23
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,208...    43   2e-04
10_08_0406 - 17688069-17690643,17691065-17691132                       30   1.3  
12_02_0929 - 24493168-24493458,24493545-24493643,24493768-244938...    29   3.0  
10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821...    28   5.3  
04_04_0739 - 27693768-27694305,27694765-27694912,27694987-276951...    28   5.3  
02_03_0285 - 17296164-17296203,17296406-17296524,17296572-172967...    28   5.3  

>02_01_0312 -
           2082614-2082677,2082815-2082945,2083041-2083129,
           2083223-2083292,2083429-2083509,2083768-2083821,
           2084864-2085067,2086272-2086366,2086976-2086997,
           2087492-2087585,2087677-2087764,2087874-2087979,
           2088103-2088189,2088261-2088309,2088418-2088521,
           2088605-2088697,2088900-2088974,2089316-2089384,
           2090182-2090250,2090339-2090374,2090471-2090565,
           2090836-2090911,2091067-2091153,2091287-2091355,
           2091654-2091731,2091836-2091925,2092436-2092642,
           2092736-2092879
          Length = 841

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +1

Query: 82  CGYEYI---ITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFTRSDMVLSP 252
           CG E +      +L   L+ +L  S+ F+++P++ P +R      G       SD+VL P
Sbjct: 16  CGVEVLDFPAGEELPAVLSHSLSSSFDFLLAPLVDPDYR---PTPGSVLPVAASDLVLGP 72

Query: 253 QDWTXRIVAKLSPYINV 303
             W+  IV K+S +I++
Sbjct: 73  AQWSSHIVGKISEWIDL 89


>10_08_0406 - 17688069-17690643,17691065-17691132
          Length = 880

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 401 SIHGRESNNLARILQTYYETSHHPSLIWAC 490
           ++H   S N+ R++ TY+  +H P L W C
Sbjct: 554 TVHVFSSWNIVRMVCTYHRAAHRPWLRWLC 583


>12_02_0929 -
           24493168-24493458,24493545-24493643,24493768-24493872,
           24494101-24494193,24494438-24494530,24494646-24494699,
           24494816-24494917,24495058-24495132,24495245-24495418
          Length = 361

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 164 RPLFTHVFVGNPQMPVKMVVLRGQIWF 244
           R L T +FVGNP   + M  ++   WF
Sbjct: 252 RDLITRIFVGNPASRITMPEIKNHPWF 278


>10_08_0883 +
           21279913-21280235,21281066-21281327,21281998-21282199,
           21282289-21282436,21282541-21283084
          Length = 492

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 554 WNEPWYWWS 580
           W +PWYWWS
Sbjct: 285 WFKPWYWWS 293


>04_04_0739 -
           27693768-27694305,27694765-27694912,27694987-27695188,
           27695802-27695864,27695865-27696120,27697811-27697953
          Length = 449

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 554 WNEPWYWWS 580
           W +PWYWWS
Sbjct: 244 WFKPWYWWS 252


>02_03_0285 -
           17296164-17296203,17296406-17296524,17296572-17296742,
           17298878-17298985,17299783-17299905,17300057-17300143,
           17300765-17300884
          Length = 255

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 102 YYVFITTRYFLLCHFFYLILSQANGVAKTFFT 7
           ++ +++ ++FL CH  Y I  Q N V  TF+T
Sbjct: 21  WWGYLSVKHFLTCHHSYKI--QCNKVFSTFYT 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,301,275
Number of Sequences: 37544
Number of extensions: 313991
Number of successful extensions: 683
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)