Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A23
(631 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_37923| Best HMM Match : rve (HMM E-Value=1.2e-12) 30 1.3
SB_37261| Best HMM Match : rve (HMM E-Value=2.1e-08) 30 1.3
SB_19007| Best HMM Match : rve (HMM E-Value=2e-12) 30 1.3
SB_56129| Best HMM Match : rve (HMM E-Value=2.3e-12) 30 1.3
SB_52583| Best HMM Match : rve (HMM E-Value=0.00025) 30 1.3
SB_43345| Best HMM Match : rve (HMM E-Value=2.8e-11) 30 1.3
SB_15661| Best HMM Match : rve (HMM E-Value=3e-10) 30 1.3
SB_25625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_49906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_47583| Best HMM Match : SAP (HMM E-Value=8.9e-08) 28 5.4
SB_47249| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_43372| Best HMM Match : DUF1495 (HMM E-Value=5.3) 28 5.4
SB_32949| Best HMM Match : SAP (HMM E-Value=1) 28 5.4
SB_11984| Best HMM Match : rve (HMM E-Value=2.3) 28 5.4
SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073) 28 7.2
SB_55795| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-08) 27 9.5
>SB_57953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 347 LNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPMLCS 508
L +E++Y LG+P++M+ + NLA + SH L W VPM CS
Sbjct: 118 LMQEVNYAIHLGLPSVMLELGNYNIINLAHYVNDILINSHVQQL-WIKVPMRCS 170
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 31.5 bits (68), Expect = 0.58
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 813 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 867
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 868 --------RTY--CEENRIQWKFNRERAPWWGGFFERI 895
>SB_37923| Best HMM Match : rve (HMM E-Value=1.2e-12)
Length = 283
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 58 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 112
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 113 --------RTY--CEENRIQWKFNLERAPWWGGFFERM 140
>SB_37261| Best HMM Match : rve (HMM E-Value=2.1e-08)
Length = 757
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 404 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 458
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 459 --------RTY--CEENRIQWKFNLERAPWWGGFFERM 486
>SB_19007| Best HMM Match : rve (HMM E-Value=2e-12)
Length = 539
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 269 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 323
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 324 --------RTY--CEENRIQWKFNLERAPWWGGFFERM 351
>SB_56129| Best HMM Match : rve (HMM E-Value=2.3e-12)
Length = 308
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 151 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 205
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 206 --------RTY--CEENRIQWKFNLERAPWWGGFFERM 233
>SB_52583| Best HMM Match : rve (HMM E-Value=0.00025)
Length = 287
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 17 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 71
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 72 --------RTY--CEENRIQWKFNLERAPWWGGFFERM 99
>SB_43345| Best HMM Match : rve (HMM E-Value=2.8e-11)
Length = 382
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 257 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 311
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 312 --------RTY--CEENRIQWKFNLERAPWWGGFFERM 339
>SB_15661| Best HMM Match : rve (HMM E-Value=3e-10)
Length = 375
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIW 484
+HL+ T +LN +C G PA+++S + + + A+ L Y+ P +
Sbjct: 105 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD---QPDI-- 159
Query: 485 ACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERL 598
TY C E+ Q K E WW F ER+
Sbjct: 160 --------RTY--CEENRIQWKFNLERAPWWGGFFERM 187
>SB_25625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/52 (23%), Positives = 30/52 (57%)
Frame = +1
Query: 52 IKKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNA 207
+K + + + +++TADL++ LTE+ S++++++ + P T+A
Sbjct: 41 LKSALTESHTDSFTWLLTADLKSALTESHTDSFTWLLTADLKPALTESHTDA 92
>SB_49906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 67 QQEISCGYEYIITADLQTCLTEALQCSYSFIVSP 168
QQ+I+ GYE + A L +C T+ +Q + ++ P
Sbjct: 8 QQQITTGYESVAFAILSSCRTQFMQITDRILLYP 41
>SB_47583| Best HMM Match : SAP (HMM E-Value=8.9e-08)
Length = 407
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 406 TREREQQFSQNSPNLL*NEPPSVSNMGMCTYAM 504
T+ +QQ S SP+ + PPS S G T AM
Sbjct: 114 TKSVKQQSSMFSPSAMLCSPPSTSTQGQTTLAM 146
>SB_47249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 281 SYLRTLTLIHLQPTVRQRHXDYLN--EELSY 367
SYLR LT IH+ P DY+N EE Y
Sbjct: 54 SYLRALTPIHVLPNDSDYSMDYINVPEEFRY 84
>SB_43372| Best HMM Match : DUF1495 (HMM E-Value=5.3)
Length = 269
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 281 SYLRTLTLIHLQPTVRQRHXDYLN--EELSY 367
SYLR LT IH+ P DY+N EE Y
Sbjct: 8 SYLRALTPIHVLPNDSDYSMDYINVPEEFRY 38
>SB_32949| Best HMM Match : SAP (HMM E-Value=1)
Length = 269
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 406 TREREQQFSQNSPNLL*NEPPSVSNMGMCTYAM 504
T+ +QQ S SP+ + PPS S G T AM
Sbjct: 192 TKSVKQQSSMFSPSAMLCSPPSTSTQGQTTLAM 224
>SB_11984| Best HMM Match : rve (HMM E-Value=2.3)
Length = 212
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 305 IHLQPTVRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYE 457
+HL+ T +LN +C G PA+++S + + + A+ L Y+
Sbjct: 17 LHLELTEDLSTRSFLNCLRRFCARRGTPALIVSDNAKTFKSAAKFLNELYD 67
>SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073)
Length = 498
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 554 WNEPWYWWSKFHERLDWDKRV 616
WN+PWY W K + D DK V
Sbjct: 26 WNKPWYQWDK--KENDADKTV 44
>SB_55795| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-08)
Length = 363
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 219 TIFTGICGLPTKTWVNNGRNYK*ITALKCFC 127
T + C +PT ++N+ RN + L C+C
Sbjct: 213 TFLSYFCFVPTAVFINDFRNTEAYVVLACYC 243
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,187,807
Number of Sequences: 59808
Number of extensions: 386082
Number of successful extensions: 703
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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