Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A23
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein. 67 6e-11
BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine methyl... 67 6e-11
AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransfera... 67 6e-11
AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein. 67 6e-11
AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor prot... 30 7.8
AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane hel... 30 7.8
>CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein.
Length = 637
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 323 VRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPML 502
+R+ + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP++
Sbjct: 99 IRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLV 158
Query: 503 C------STTYXXCTEDDEQXKAWNEPWYWWSKFHERLDWDKRVGVVLE 631
T E+ + W WW F D+ KR+ V LE
Sbjct: 159 APEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 207
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 76 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 246
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
Query: 247 SPQDWTXRIVAKLSPYI 297
S +DW IV KLSP+I
Sbjct: 74 SGRDWNTLIVGKLSPWI 90
>BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine
methyltransferase 5 protein.
Length = 637
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 323 VRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPML 502
+R+ + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP++
Sbjct: 99 IRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLV 158
Query: 503 C------STTYXXCTEDDEQXKAWNEPWYWWSKFHERLDWDKRVGVVLE 631
T E+ + W WW F D+ KR+ V LE
Sbjct: 159 APEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 207
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 76 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 246
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
Query: 247 SPQDWTXRIVAKLSPYI 297
S +DW IV KLSP+I
Sbjct: 74 SGRDWNTLIVGKLSPWI 90
>AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransferase
protein.
Length = 637
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 323 VRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPML 502
+R+ + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP++
Sbjct: 99 IRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLV 158
Query: 503 C------STTYXXCTEDDEQXKAWNEPWYWWSKFHERLDWDKRVGVVLE 631
T E+ + W WW F D+ KR+ V LE
Sbjct: 159 APEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 207
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 76 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 246
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
Query: 247 SPQDWTXRIVAKLSPYI 297
S +DW IV KLSP+I
Sbjct: 74 SGRDWNTLIVGKLSPWI 90
>AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein.
Length = 637
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 323 VRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNLARILQTYYETSHHPSLIWACVPML 502
+R+ + +EL++ LG+PA ++ ++ ++ NLAR+L + T HH S+ W VP++
Sbjct: 99 IRRNSEAAMLQELNFGAYLGLPAFLLPLNQEDNTNLARVLTNHIHTGHHSSMFWMRVPLV 158
Query: 503 C------STTYXXCTEDDEQXKAWNEPWYWWSKFHERLDWDKRVGVVLE 631
T E+ + W WW F D+ KR+ V LE
Sbjct: 159 APEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALE 207
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 76 ISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRR---QSTNAGKNGGFTRSDMVL 246
+S G + ++ L + + F+ P+ HPRF+R Q + G TRSD++L
Sbjct: 14 VSSGRDLNCVPEIADTLGAVAKQGFDFLCMPVFHPRFKREFIQEPAKNRPGPQTRSDLLL 73
Query: 247 SPQDWTXRIVAKLSPYI 297
S +DW IV KLSP+I
Sbjct: 74 SGRDWNTLIVGKLSPWI 90
>AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor
protein.
Length = 217
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 94 YIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGG 222
+ I +QT A+ SY FI +IH R S A GG
Sbjct: 133 FAICGFIQTATVLAITVSYGFIAGAVIHMRSVEGSRRAASTGG 175
>AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane helix
receptor protein.
Length = 320
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 94 YIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGG 222
+ I +QT A+ SY FI +IH R S A GG
Sbjct: 204 FAICGFIQTATVLAITVSYGFIAGAVIHMRSVEGSRRAASTGG 246
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,926,097
Number of Sequences: 237096
Number of extensions: 1810265
Number of successful extensions: 4082
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4074
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -