Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A23
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p pro...    30   3.0  
AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen pr...    30   3.0  
AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative pro...    30   3.0  
AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA...    30   3.0  
AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB...    29   5.2  
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent...    28   9.1  
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P...    28   9.1  

>AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p
           protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +2

Query: 392 IMISIHGRESNNLARILQTYYETSHHPSLIWACV-----PMLCSTTYXXCTEDDEQXKAW 556
           +M+ + G E+ NLA I+    +    PS  W        P L +  +      +E  +A 
Sbjct: 104 LMVRLRGPENENLASIVLAKTKDDF-PSGNWFIQVPITNPELATFEHRKDATAEEVAEAE 162

Query: 557 -NEPWYWWSKFHERLDWDKRVGVVLE 631
            N+PW WW+          +V VV+E
Sbjct: 163 SNDPWNWWNNLRMVTKHSTKVKVVIE 188


>AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen
           protein.
          Length = 609

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +2

Query: 392 IMISIHGRESNNLARILQTYYETSHHPSLIWACV-----PMLCSTTYXXCTEDDEQXKAW 556
           +M+ + G E+ NLA I+    +    PS  W        P L +  +      +E  +A 
Sbjct: 104 LMVRLRGPENENLASIVLAKTKDDF-PSGNWFIQVPITNPELATFEHRKDATAEEVAEAE 162

Query: 557 -NEPWYWWSKFHERLDWDKRVGVVLE 631
            N+PW WW+          +V VV+E
Sbjct: 163 SNDPWNWWNNLRMVTKHSTKVKVVIE 188


>AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative
           protein methyltransferaseJBP1 protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +2

Query: 392 IMISIHGRESNNLARILQTYYETSHHPSLIWACV-----PMLCSTTYXXCTEDDEQXKAW 556
           +M+ + G E+ NLA I+    +    PS  W        P L +  +      +E  +A 
Sbjct: 104 LMVRLRGPENENLASIVLAKTKDDF-PSGNWFIQVPITNPELATFEHRKDATAEEVAEAE 162

Query: 557 -NEPWYWWSKFHERLDWDKRVGVVLE 631
            N+PW WW+          +V VV+E
Sbjct: 163 SNDPWNWWNNLRMVTKHSTKVKVVIE 188


>AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA,
           isoform A protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
 Frame = +2

Query: 392 IMISIHGRESNNLARILQTYYETSHHPSLIWACV-----PMLCSTTYXXCTEDDEQXKAW 556
           +M+ + G E+ NLA I+    +    PS  W        P L +  +      +E  +A 
Sbjct: 104 LMVRLRGPENENLASIVLAKTKDDF-PSGNWFIQVPITNPELATFEHRKDATAEEVAEAE 162

Query: 557 -NEPWYWWSKFHERLDWDKRVGVVLE 631
            N+PW WW+          +V VV+E
Sbjct: 163 SNDPWNWWNNLRMVTKHSTKVKVVIE 188


>AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB,
           isoform B protein.
          Length = 605

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/80 (21%), Positives = 32/80 (40%)
 Frame = +2

Query: 392 IMISIHGRESNNLARILQTYYETSHHPSLIWACVPMLCSTTYXXCTEDDEQXKAWNEPWY 571
           +M+ + G E+ NLA I+    + +    +      +         T ++      N+PW 
Sbjct: 104 LMVRLRGPENENLASIVLAKTKGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWN 163

Query: 572 WWSKFHERLDWDKRVGVVLE 631
           WW+          +V VV+E
Sbjct: 164 WWNNLRMVTKHSTKVKVVIE 183


>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
           centrosomal protein protein.
          Length = 2726

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 323 VRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNL 430
           V+++  DYLN++++ C  LG   + I+    ES  L
Sbjct: 665 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 700


>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
           isoform B protein.
          Length = 2897

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 323 VRQRHXDYLNEELSYCXGLGVPAIMISIHGRESNNL 430
           V+++  DYLN++++ C  LG   + I+    ES  L
Sbjct: 836 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 871


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,998,444
Number of Sequences: 53049
Number of extensions: 559620
Number of successful extensions: 1225
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)