Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A23
(631 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g31120.2 68417.m04418 Skb1 methyltransferase family protein c... 37 0.010
At4g31120.1 68417.m04417 Skb1 methyltransferase family protein c... 37 0.010
At2g35710.2 68415.m04379 glycogenin glucosyltransferase (glycoge... 28 4.4
At2g35710.1 68415.m04380 glycogenin glucosyltransferase (glycoge... 28 4.4
At1g08320.1 68414.m00920 bZIP family transcription factor contai... 28 4.4
At3g24060.1 68416.m03021 self-incompatibility protein-related lo... 28 5.9
At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.8
>At4g31120.2 68417.m04418 Skb1 methyltransferase family protein
contains Pfam profile: PF05185 Skb1 methyltransferase
Length = 584
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Frame = +1
Query: 82 CGYEYIITADLQTCLTEALQCS-YSFIVSPIIHPRFRRQSTNAGKNGGFTR------SDM 240
CG E + D+ L + + ++++P++ P +R NG T+ SD+
Sbjct: 17 CGVETDFSNDVTHLLNFNISTGGFDYVLAPLVDPSYRPSLVEG--NGVDTQVLPVCGSDL 74
Query: 241 VLSPQDWTXRIVAKLSPYINV 303
VLSP W+ +V K+S +I++
Sbjct: 75 VLSPSQWSSHVVGKISSWIDL 95
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +2
Query: 347 LNEELSYCXGLGVPAIMISI-HGRESNNLARILQTYYETSHHPSLIWACVPMLCSTTYXX 523
L +E+++ L + A ++ G+ N AR + + L W VP++ S
Sbjct: 110 LKQEIAWATHLSLQACLLPTPKGKSCANYARCVNQILQGLTTLQL-WLRVPLVKSEG--- 165
Query: 524 CTEDDEQXKAWNEPWYWWSKFHERLDWDKRVGVVLE 631
D+ + N+ W W+ F + D ++ V L+
Sbjct: 166 -DSMDDTSEGLNDSWELWNSFRLLCEHDSKLSVALD 200
>At4g31120.1 68417.m04417 Skb1 methyltransferase family protein
contains Pfam profile: PF05185 Skb1 methyltransferase
Length = 642
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Frame = +1
Query: 82 CGYEYIITADLQTCLTEALQCS-YSFIVSPIIHPRFRRQSTNAGKNGGFTR------SDM 240
CG E + D+ L + + ++++P++ P +R NG T+ SD+
Sbjct: 17 CGVETDFSNDVTHLLNFNISTGGFDYVLAPLVDPSYRPSLVEG--NGVDTQVLPVCGSDL 74
Query: 241 VLSPQDWTXRIVAKLSPYINV 303
VLSP W+ +V K+S +I++
Sbjct: 75 VLSPSQWSSHVVGKISSWIDL 95
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +2
Query: 347 LNEELSYCXGLGVPAIMISI-HGRESNNLARILQTYYETSHHPSLIWACVPMLCSTTYXX 523
L +E+++ L + A ++ G+ N AR + + L W VP++ S
Sbjct: 110 LKQEIAWATHLSLQACLLPTPKGKSCANYARCVNQILQGLTTLQL-WLRVPLVKSEG--- 165
Query: 524 CTEDDEQXKAWNEPWYWWSKFHERLDWDKRVGVVLE 631
D+ + N+ W W+ F + D ++ V L+
Sbjct: 166 -DSMDDTSEGLNDSWELWNSFRLLCEHDSKLSVALD 200
>At2g35710.2 68415.m04379 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-2 from
Homo sapiens [SP|O15488]
Length = 389
Score = 28.3 bits (60), Expect = 4.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 554 WNEPWYWWS 580
W +PWYWWS
Sbjct: 183 WLKPWYWWS 191
>At2g35710.1 68415.m04380 glycogenin glucosyltransferase
(glycogenin)-related low similarity to glycogenin-2 from
Homo sapiens [SP|O15488]
Length = 497
Score = 28.3 bits (60), Expect = 4.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 554 WNEPWYWWS 580
W +PWYWWS
Sbjct: 291 WLKPWYWWS 299
>At1g08320.1 68414.m00920 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 481
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -3
Query: 383 HQVPYSMIVPHSNNPXDAA*QSAEGESTLMYGDSLATILXVQS*GDRTISDRVKPPFL 210
H +PYS+I +NN + + +G S+ +G+ L + +Q G + ++ KPP L
Sbjct: 16 HHLPYSLIHGLNNNHPSSGFINQDGSSSFDFGE-LEEAIVLQ--GVKYRNEEAKPPLL 70
>At3g24060.1 68416.m03021 self-incompatibility protein-related low
similarity to S3 self-incompatibility protein [Papaver
rhoeas] GI:1107841
Length = 147
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = +2
Query: 434 RILQTYYETSHHPSLIWACVPMLCSTTYXXCTEDDEQXKAWNEPWYWWSKFHERLDWDKR 613
R++ ++ + S P +IW P DD + A + W W +++ + WD +
Sbjct: 41 RVINSFRDNSSLPLVIWCTSPQGDLGGRALQEGDDFEWTAKIDLWSWMAEYTCTMKWDSK 100
>At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 490
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 473 SLIWACVPMLCSTTYXXCTEDDEQXKAWNEPWYW----WSKFHERLDWDKRVG 619
S+++ C+ LC+ E +A N+P+ W W K+ + +W ++ G
Sbjct: 283 SVLYVCLGSLCNLPLAQLKELGLGLEASNKPFIWVIREWGKYGDLANWMQQSG 335
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,270,753
Number of Sequences: 28952
Number of extensions: 258320
Number of successful extensions: 515
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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