Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A20
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.8  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -3

Query: 422 CKCV-SHNGQYCHHNXGLLY*DNFQNEAVCV 333
           C+C     G+YCH N      +  +N   CV
Sbjct: 54  CQCQPGFTGKYCHENINDCKVNPCENGGTCV 84


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +2

Query: 158 PEICFNTFNMRRGHLSSGGWRTENPRQH 241
           P    N ++   G+ S+  WR  NP  +
Sbjct: 369 PSTSNNRWHNNNGNNSNNHWRKNNPNDN 396


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 124 NFYSIRFLNDHTRLITLVFNEIFSAGI 44
           +F  I +L+ H      +FNE+F   +
Sbjct: 222 SFSKICYLHQHLSKSVKLFNEVFGVSL 248


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 124 NFYSIRFLNDHTRLITLVFNEIFSAGI 44
           +F  I +L+ H      +FNE+F   +
Sbjct: 240 SFSKICYLHQHLSKSVKLFNEVFGVSL 266


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +2

Query: 398  DHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGGGQRQILPY 520
            D  E HT    +S   NSS+N+       N G     IL +
Sbjct: 999  DKTETHTNNRTHSATSNSSVNANTNNIPTNAGTTPGAILAF 1039


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 645 ELLATILWSTSPMLFIWYAC 586
           ELL    WS +  +++W +C
Sbjct: 396 ELLLDADWSVNAGMWMWLSC 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,964
Number of Sequences: 336
Number of extensions: 2661
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)