Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A20
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0174 - 18044516-18046327                                         32   0.46 
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043...    29   3.2  
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153...    28   7.4  
03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934           27   9.8  
02_01_0087 + 623174-623421,623576-623693,624266-624588,625267-62...    27   9.8  

>03_04_0174 - 18044516-18046327
          Length = 603

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 356 NYPNXGDXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGGG 499
           +YP+        ++ H   HTY +H+    N++ N+ +  +YQ  GGG
Sbjct: 31  SYPSSRGSTSSPSSHHTHNHTYYHHSHSHYNNNSNTNY--YYQGGGGG 76


>10_07_0063 -
           12502305-12503361,12503567-12503668,12504251-12504378,
           12504653-12504764,12504876-12504927,12505260-12505517,
           12505943-12506079,12506296-12506606
          Length = 718

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 374 DXHYDDNTDHYERHTYRNHNSPQRNSSLNSXH-RGHYQNXGGGQ 502
           D H++D + H++++ ++N+   ++ S     H + H+QN  G Q
Sbjct: 627 DYHWEDQSYHHQQNHHQNYYGHRQMSQDQYHHQQNHHQNYHGRQ 670


>08_01_0181 +
           1530623-1531626,1531723-1531902,1531998-1532177,
           1532363-1532442,1532528-1532701,1533001-1533118,
           1533223-1533301
          Length = 604

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 434 CYGFCKCVSHNGQYCHHNXGLLY*DNFQNEAV 339
           C+ F K +  NGQ CH++   +Y D     A+
Sbjct: 217 CHYFSKGICKNGQNCHYSHHQVYQDALAGAAI 248


>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
          Length = 453

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 374 DXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGG 496
           D   DDN D Y      NH++P + S+ N    G Y   GG
Sbjct: 417 DDGKDDNFDSY------NHSTPSKGSNQNGTTGGSYWTEGG 451


>02_01_0087 +
           623174-623421,623576-623693,624266-624588,625267-625551,
           625643-625823,625964-626119
          Length = 436

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 561 IFEI*VSSVLVCWRYGSICLWPPPXF 484
           +F + V++ L CW YGS  + PP  F
Sbjct: 231 VFVLAVTTFLDCWMYGSQVIVPPLNF 256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,627,052
Number of Sequences: 37544
Number of extensions: 233184
Number of successful extensions: 565
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)