BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A20
(652 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069192-1|AAL39337.1| 734|Drosophila melanogaster GH24787p pro... 35 0.083
AE014296-1465|AAF50409.1| 734|Drosophila melanogaster CG6745-PA... 35 0.083
AE014134-2140|AAF53151.1| 69|Drosophila melanogaster CG6770-PA... 33 0.34
AY061169-1|AAL28717.1| 346|Drosophila melanogaster LD13761p pro... 33 0.44
AE014134-1186|AAF52452.2| 908|Drosophila melanogaster CG10354-P... 33 0.44
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei... 31 1.0
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me... 31 1.0
AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p pro... 31 1.0
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA... 31 1.0
BT001258-1|AAN71014.1| 397|Drosophila melanogaster AT02070p pro... 29 4.1
AY051454-1|AAK92878.1| 397|Drosophila melanogaster GH12043p pro... 29 4.1
AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-P... 29 4.1
AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-P... 29 4.1
AL121806-13|CAB65886.1| 602|Drosophila melanogaster EG:33C11.3 ... 29 5.5
AF541949-1|AAN34653.1| 406|Drosophila melanogaster unknown prot... 29 5.5
AE014298-168|AAF45597.2| 655|Drosophila melanogaster CG3638-PA,... 29 5.5
AE014298-167|AAN09038.1| 639|Drosophila melanogaster CG3638-PB,... 29 5.5
AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,... 29 5.5
AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,... 29 5.5
>AY069192-1|AAL39337.1| 734|Drosophila melanogaster GH24787p
protein.
Length = 734
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 425 NHNSPQRNSSLNSXHRGHYQNXGGGQRQILPYLQQTRTLETQI 553
NH+ P S+ + QN GGGQR P Q++ LETQ+
Sbjct: 12 NHSGPYNKSNWRGQKKDRPQNNGGGQRNSAPQ-QKSTLLETQV 53
>AE014296-1465|AAF50409.1| 734|Drosophila melanogaster CG6745-PA
protein.
Length = 734
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 425 NHNSPQRNSSLNSXHRGHYQNXGGGQRQILPYLQQTRTLETQI 553
NH+ P S+ + QN GGGQR P Q++ LETQ+
Sbjct: 12 NHSGPYNKSNWRGQKKDRPQNNGGGQRNSAPQ-QKSTLLETQV 53
>AE014134-2140|AAF53151.1| 69|Drosophila melanogaster CG6770-PA
protein.
Length = 69
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 374 DXHYDD----NTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGGGQRQILPYLQQT 532
+ H+D+ N DH ++H + H+ QRN + H H+ + G R+IL L T
Sbjct: 3 EAHFDEYEHYNFDH-DKHIFSGHSGKQRNKREANEHTNHF-DPSGHSRKILTKLMNT 57
>AY061169-1|AAL28717.1| 346|Drosophila melanogaster LD13761p
protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 353 GNYPNXGDXHYDDNTDHYERHTYRNHNSPQRN-SSLNSXHRGHYQNXGGGQRQ 508
G Y N + H +R N N QRN ++ N +YQ GG ++Q
Sbjct: 287 GGYQNNYNNRQQQQYGHNQRFNQDNSNQQQRNFNNYNGPRNNNYQQQGGSRQQ 339
>AE014134-1186|AAF52452.2| 908|Drosophila melanogaster CG10354-PA
protein.
Length = 908
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 353 GNYPNXGDXHYDDNTDHYERHTYRNHNSPQRN-SSLNSXHRGHYQNXGGGQRQ 508
G Y N + H +R N N QRN ++ N +YQ GG ++Q
Sbjct: 849 GGYQNNYNNRQQQQYGHNQRFNQDNSNQQQRNFNNYNGPRNNNYQQQGGSRQQ 901
>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
protein.
Length = 1408
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 455 GSYCAEDCYGFCKC-VSHNGQYCHHNXGLLY*DNFQNEAVCV 333
GS D FCKC V H G +C HN + +N +C+
Sbjct: 774 GSCEMSDVGTFCKCHVGHTGTFCEHNLNECSPNPCRNGGICL 815
>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
D.melanogaster serrate(Ser) mRNA, complete cds. ).
Length = 1404
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 455 GSYCAEDCYGFCKC-VSHNGQYCHHNXGLLY*DNFQNEAVCV 333
GS D FCKC V H G +C HN + +N +C+
Sbjct: 770 GSCEMSDVGTFCKCHVGHTGTFCEHNLNECSPNPCRNGGICL 811
>AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p
protein.
Length = 950
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 455 GSYCAEDCYGFCKC-VSHNGQYCHHNXGLLY*DNFQNEAVCV 333
GS D FCKC V H G +C HN + +N +C+
Sbjct: 547 GSCEMSDVGTFCKCHVGHTGTFCEHNLNECSPNPCRNGGICL 588
>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
protein.
Length = 1407
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 455 GSYCAEDCYGFCKC-VSHNGQYCHHNXGLLY*DNFQNEAVCV 333
GS D FCKC V H G +C HN + +N +C+
Sbjct: 773 GSCEMSDVGTFCKCHVGHTGTFCEHNLNECSPNPCRNGGICL 814
>BT001258-1|AAN71014.1| 397|Drosophila melanogaster AT02070p
protein.
Length = 397
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 380 HYDDNTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGGG---QRQILP 517
H +++H + H + + H+ H Q GGG Q+Q++P
Sbjct: 289 HQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQGGGGPGSQQQMVP 337
>AY051454-1|AAK92878.1| 397|Drosophila melanogaster GH12043p
protein.
Length = 397
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 380 HYDDNTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGGG---QRQILP 517
H +++H + H + + H+ H Q GGG Q+Q++P
Sbjct: 289 HQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQGGGGPGSQQQMVP 337
>AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-PC,
isoform C protein.
Length = 980
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 380 HYDDNTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGGG---QRQILP 517
H +++H + H + + H+ H Q GGG Q+Q++P
Sbjct: 872 HQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQGGGGPGSQQQMVP 920
>AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-PA,
isoform A protein.
Length = 980
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 380 HYDDNTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGGG---QRQILP 517
H +++H + H + + H+ H Q GGG Q+Q++P
Sbjct: 872 HQQQQHQQHQQHQQQQHQQQHQQHQQHQQHQQHQQQGGGGPGSQQQMVP 920
>AL121806-13|CAB65886.1| 602|Drosophila melanogaster EG:33C11.3
protein.
Length = 602
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 365 NXGDXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHR 472
N G Y ++ + H Y NH S N N+ HR
Sbjct: 529 NNGTTSYHNSHQQHNNHLYSNHYSHSNNHYNNTQHR 564
>AF541949-1|AAN34653.1| 406|Drosophila melanogaster unknown
protein.
Length = 406
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 359 YPNXGDXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHRGHYQNXGG--GQRQ 508
Y G +Y+ Y R NHN+ R S N+ + +Y N GG GQ Q
Sbjct: 331 YYRRGANNYNRGARGYNRGRNINHNNYNRGS--NNNNNNNYNNRGGRRGQNQ 380
>AE014298-168|AAF45597.2| 655|Drosophila melanogaster CG3638-PA,
isoform A protein.
Length = 655
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 365 NXGDXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHR 472
N G Y ++ + H Y NH S N N+ HR
Sbjct: 541 NNGTTSYHNSHQQHNNHLYSNHYSHSNNHYNNTQHR 576
>AE014298-167|AAN09038.1| 639|Drosophila melanogaster CG3638-PB,
isoform B protein.
Length = 639
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 365 NXGDXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHR 472
N G Y ++ + H Y NH S N N+ HR
Sbjct: 525 NNGTTSYHNSHQQHNNHLYSNHYSHSNNHYNNTQHR 560
>AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,
isoform C protein.
Length = 1201
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 365 NXGDXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHR 472
N G Y ++ + H Y NH S N N+ HR
Sbjct: 541 NNGTTSYHNSHQQHNNHLYSNHYSHSNNHYNNTQHR 576
>AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,
isoform D protein.
Length = 1404
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 365 NXGDXHYDDNTDHYERHTYRNHNSPQRNSSLNSXHR 472
N G Y ++ + H Y NH S N N+ HR
Sbjct: 541 NNGTTSYHNSHQQHNNHLYSNHYSHSNNHYNNTQHR 576
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,605,303
Number of Sequences: 53049
Number of extensions: 431534
Number of successful extensions: 1189
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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