Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A18
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 359 1e-99
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 353 7e-98
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 351 2e-97
SB_56| Best HMM Match : Actin (HMM E-Value=0) 351 2e-97
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 347 4e-96
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 6e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 2e-45
SB_54| Best HMM Match : Actin (HMM E-Value=0) 137 8e-33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 124 5e-29
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 95 4e-20
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 95 6e-20
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 8e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 52 3e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 41 0.001
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.002
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 35 0.067
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 32 0.47
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.62
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 2.5
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 29 2.5
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 3.3
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 29 3.3
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.3
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 4.4
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 4.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 4.4
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 5.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.8
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 5.8
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.8
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 7.6
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 7.6
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 359 bits (882), Expect = 1e-99
Identities = 165/172 (95%), Positives = 169/172 (98%)
Frame = +2
Query: 137 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQ 316
MCD+ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGDGV+HTVPIYEGYAL
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 172
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 353 bits (868), Expect = 7e-98
Identities = 163/172 (94%), Positives = 168/172 (97%)
Frame = +2
Query: 137 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQ 316
M D+ +AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGDGV+HTVPIYEGYAL
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 172
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 351 bits (864), Expect = 2e-97
Identities = 162/170 (95%), Positives = 167/170 (98%)
Frame = +2
Query: 143 DEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSK 322
++ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 323 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 502
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 503 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
IMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGDGV+HTVPIYEGYAL
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 171
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 351 bits (864), Expect = 2e-97
Identities = 162/170 (95%), Positives = 167/170 (98%)
Frame = +2
Query: 143 DEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSK 322
++ VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 323 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 502
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 503 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
IMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGDGV+HTVPIYEGYAL
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 171
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 347 bits (854), Expect = 4e-96
Identities = 161/173 (93%), Positives = 167/173 (96%), Gaps = 2/173 (1%)
Frame = +2
Query: 137 MCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQ 316
M D+ +AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYE--GYA 649
TQIMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 184 bits (448), Expect = 6e-47
Identities = 85/169 (50%), Positives = 117/169 (69%), Gaps = 3/169 (1%)
Frame = +2
Query: 155 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGXKDSYVGDEAQSKRG 328
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 329 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 506 MFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+AL
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFAL 175
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 179 bits (436), Expect = 2e-45
Identities = 82/89 (92%), Positives = 84/89 (94%)
Frame = +2
Query: 143 DEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSK 322
D+ VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 323 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 409
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 104 bits (249), Expect = 7e-23
Identities = 48/57 (84%), Positives = 53/57 (92%)
Frame = +2
Query: 482 NREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
N + M +IMFETFN+PAMYVAIQAVLSLYA GRTTGIV+DSGDGV+HTVPIYEGYAL
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL 134
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 137 bits (331), Expect = 8e-33
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +2
Query: 389 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 568
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 569 AXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
A GRTTG V D GDGVSHTVP+Y+GY L
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWL 2216
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 262
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 124 bits (300), Expect = 5e-29
Identities = 52/72 (72%), Positives = 66/72 (91%)
Frame = +2
Query: 437 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGV 616
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 617 SHTVPIYEGYAL 652
SH+VPIYEG+A+
Sbjct: 186 SHSVPIYEGFAM 197
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 95.1 bits (226), Expect = 4e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = +2
Query: 503 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
IMFE FN+PA+YVAIQAVLSLYA GRTTG+V DSGDGVSH VPIYEGYAL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYAL 50
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 94.7 bits (225), Expect = 6e-20
Identities = 39/102 (38%), Positives = 67/102 (65%)
Frame = +2
Query: 347 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 526
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 527 PAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
PA ++ +VL+ +A GR+ G+V+DSG + VP+++GY L
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 146 EXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 262
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 131 FKMCDEXVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGXKD-SYV 301
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 302 GDEAQSKRGILTL 340
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 548 QAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 652
Q LSLYA G T G+ L SG + IYEG+ L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTL 801
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 275 GMGXKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 454
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 584 TGIVLDSGDGVSHTVPI 634
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Frame = +2
Query: 152 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVGDEAQSKRGI 331
+A LV+D G+ K GFA + APR++ P+ + + + + + ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 332 LTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 505
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 506 MFETFNTPAMYVAIQAVLSLY------AXGRTTGIVLDSGDGVSHTVPIYEG 643
+FE +N A+ A LS Y +V+D+G +H VP++ G
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNG 376
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 259 MAGPSHDRGEHGARSIISCETGLAHTGAIV 170
MA + D GE+G+ SI+S ETGLAHTGAI+
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAII 30
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 392 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 571
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 572 XGRTTGIV 595
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 TFNTPAMYVAIQAVLSLYAXGRT-TGIVLDSGDGVSHTVPIYEGYAL 652
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY +
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVI 84
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.7 bits (76), Expect = 0.067
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 516 HSTRP-PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPC 629
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 531 PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPC 629
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 142 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCXCSTQ 17
A L L+KL CRC K +R + + + IP C C+++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSE 1337
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 130 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCXCSTQC 14
L++L C C+K + KR + + Q+P C C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQCMNTC 658
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 479 ANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIV 595
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 338 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 490
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 234 GNTARGASSPAKPALHIPEPLSTT 163
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 234 GNTARGASSPAKPALHIPEPLSTT 163
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 507 CSKHSTRPPCTSPSKPCSR----CTRXVVPPVSCWTPATVSPTPC 629
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 9/50 (18%)
Frame = +3
Query: 531 PCTSPSKPC----SRCTRXVVPPVSCWTPATVSPTPC-----PSTRDTHS 653
P T PC + CT+ +P +TP T TPC PST +H+
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHA 893
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 531 PCTSPSKPC----SRCTRXVVPPVSCWTPATVSPTPC 629
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 234 GNTARGASSPAKPALHIPEPLSTT 163
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 463 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 555
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.5 bits (63), Expect = 2.5
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Frame = -1
Query: 624 VWE--TPSPESSTIPVV-------RPXAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 472
VWE T P + T+P + Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 471 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 307
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 382 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIIS 206
V+PV S D + S +C V+ SH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 205 CETGLAHT 182
CET L T
Sbjct: 252 CETQLVPT 259
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 382 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIIS 206
V+PV S D + S +C V+ SH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 205 CETGLAHT 182
CET L T
Sbjct: 310 CETQLVLT 317
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 516 HSTRPPCTSP--SKPCSRCTRXVVPPVSCWTPATVSP-TPCPSTRDTHS 653
H+T+PP T P +KP + R PP + P T P T P T H+
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHT 183
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 382 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIIS 206
V+PV S D + S +C V+ SH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 205 CETGLAHT 182
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 382 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIIS 206
V+PV S D + S +C V+ SH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 205 CETGLAHT 182
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 382 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIIS 206
V+PV S D + S +C V+ SH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 205 CETGLAHT 182
CET L T
Sbjct: 447 CETQLVLT 454
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 502 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 648
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 382 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIIS 206
V+PV S D + S +C V+ SH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 205 CETGLAHT 182
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 382 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIIS 206
V+PV S D + S +C ++ SH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 205 CETGLAHT 182
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -3
Query: 409 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSH 242
EG +P + V+PV S D + S +C ++ SH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 241 DRGEHGARSIISCETGLAHT 182
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 467 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIV 595
+ PK ++ ++F F P M +A++ + A G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 234 GNTARGASSPAKPALHIPEPLSTT 163
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 234 GNTARGASSPAKPALHIPEPLSTT 163
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -3
Query: 409 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSH 242
EG +P + V+PV S D + S +C ++ SH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 241 DRGEHGARSIISCETGLAHT 182
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -3
Query: 409 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSH 242
EG +P + V+PV S D + S +C ++ SH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 241 DRGEHGARSIISCETGLAHT 182
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -3
Query: 409 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSH 242
EG +P + V+PV S D + S +C ++ SH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 241 DRGEHGARSIISCETGLAHT 182
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 528 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPST 638
PP P P + TR VP +T PTP P T
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPT 955
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -3
Query: 409 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSH 242
EG +P + V+PV S D + S +C ++ SH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 241 DRGEHGARSIISCETGLAHT 182
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 651 SAYPS*MGTVWETPSPESSTIPVVRPXAYSESTAW 547
S +P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -3
Query: 409 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLXSHTDHHALMAGPSH 242
EG +P + V+PV S D + S +C ++ SH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 241 DRGEHGARSIISCETGLAHT 182
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = +3
Query: 405 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCT--SPSKPCSRCTRXV 578
PST S S P ++ S + + PCT +PS P + T
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPST 77
Query: 579 VPPVSCWTPATVSPTPCPSTRDTHS 653
P + TP+T S PST T S
Sbjct: 78 --PCTPSTPSTPSTPSTPSTPSTPS 100
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = -3
Query: 322 FALCLISYI--RVLXSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 158
FA CL + V+ SH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 157 GNXFVAHLELVK 122
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 466 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGI 645
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 646 RT 651
+T
Sbjct: 707 QT 708
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 517 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTP 654
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 316 LCLISYIRVLXSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 182
+C V+ SH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,534,967
Number of Sequences: 59808
Number of extensions: 578663
Number of successful extensions: 2010
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -