BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A12
(652 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 24 4.8
DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist mic... 23 6.3
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 6.3
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 23 6.3
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 23 8.4
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 8.4
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 23.8 bits (49), Expect = 4.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 346 KSPLKDRRDADREKIRXRSPTGEKKKS 426
K+ L + D++ I R+P GE++KS
Sbjct: 506 KAYLAIAQSLDKQSIPHRTPVGEREKS 532
>DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist
michelob_x protein.
Length = 201
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 205 YLMNFHYYHCCWSLSHLSFSCF 140
Y N++Y + C ++SH CF
Sbjct: 159 YNNNYYYNYYCRNISHHFLRCF 180
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 23.4 bits (48), Expect = 6.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 422 NLCYLYQMTKLKLRKNRNDLQDVRSEN 502
NLC + TKL+ +K+ ++ + +EN
Sbjct: 352 NLCDMSYRTKLQYQKHEYEVHRISNEN 378
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 193 FHYYHCCWSLSHLSFSCFLWVSSSLS 116
F +CC SHL + F WV+ S S
Sbjct: 125 FSKIYCC---SHLCLAIFYWVAPSSS 147
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 23.0 bits (47), Expect = 8.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 367 RDADREKIRXRSPTGEKKKSVLPLSNDK 450
++AD+E EK+ +LPL +DK
Sbjct: 443 KEADKETKAVHMLDAEKETCLLPLEDDK 470
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 8.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 364 RRDADREKIRXRSPTGE 414
RRD DR++ R RS +G+
Sbjct: 583 RRDRDRDRDRMRSDSGK 599
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,999
Number of Sequences: 2352
Number of extensions: 6792
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -