BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A11
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94175-1|AAC51919.1| 445|Homo sapiens mammary tumor-associated ... 190 5e-48
U85947-1|AAB88873.1| 445|Homo sapiens Int-6 protein. 190 5e-48
U62962-1|AAB58251.1| 445|Homo sapiens Int-6 protein. 190 5e-48
U54562-1|AAC51760.1| 445|Homo sapiens eIF3-p48 protein. 190 5e-48
CR542275-1|CAG47071.1| 445|Homo sapiens EIF3S6 protein. 190 5e-48
CR457029-1|CAG33310.1| 445|Homo sapiens EIF3S6 protein. 190 5e-48
BC021679-1|AAH21679.1| 445|Homo sapiens eukaryotic translation ... 190 5e-48
BC016706-1|AAH16706.1| 445|Homo sapiens eukaryotic translation ... 190 5e-48
BC008419-1|AAH08419.1| 445|Homo sapiens eukaryotic translation ... 190 5e-48
BC000734-1|AAH00734.1| 445|Homo sapiens eukaryotic translation ... 190 5e-48
BC017887-1|AAH17887.1| 445|Homo sapiens eukaryotic translation ... 188 2e-47
U94174-1|AAC51917.1| 445|Homo sapiens mammary tumor-associated ... 177 4e-44
>U94175-1|AAC51919.1| 445|Homo sapiens mammary tumor-associated
protein INT6 protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>U85947-1|AAB88873.1| 445|Homo sapiens Int-6 protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>U62962-1|AAB58251.1| 445|Homo sapiens Int-6 protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>U54562-1|AAC51760.1| 445|Homo sapiens eIF3-p48 protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>CR542275-1|CAG47071.1| 445|Homo sapiens EIF3S6 protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>CR457029-1|CAG33310.1| 445|Homo sapiens EIF3S6 protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>BC021679-1|AAH21679.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>BC016706-1|AAH16706.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>BC008419-1|AAH08419.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>BC000734-1|AAH00734.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 190 bits (462), Expect = 5e-48
Identities = 84/188 (44%), Positives = 136/188 (72%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
>BC017887-1|AAH17887.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 188 bits (458), Expect = 2e-47
Identities = 83/188 (44%), Positives = 135/188 (71%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELLQ KL++LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++LQ P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD N LS LWGKLASEIL
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEIL 178
Query: 630 VQNWDGAL 653
+QNWD +
Sbjct: 179 MQNWDAVM 186
>U94174-1|AAC51917.1| 445|Homo sapiens mammary tumor-associated
protein INT6 protein.
Length = 445
Score = 177 bits (430), Expect = 4e-44
Identities = 79/188 (42%), Positives = 130/188 (69%)
Frame = +3
Query: 90 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 269
+++DLT +I +LDRHLVFPLLEFL+ KE Y++ ELL KL+ LS TNM+D+ D+ + L
Sbjct: 2 AEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLXGKLDXLSDTNMVDFAMDVYKNL 61
Query: 270 YPEXXTPEXIIQRRGVVLSELQELQDAVXPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 449
Y + P + ++R V+++L++ Q P++++ + + + +++ RD + L ++L+
Sbjct: 62 YSDDI-PHALREKRTTVVAQLKQXQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD- 119
Query: 450 KEYXFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVMSPTDXNYLSVLWGKLASEIL 629
++ F+ E +D++YR AK++YECGNY +A YLYF ++++ TD LS LWGKLAS L
Sbjct: 120 -KHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRXALSSLWGKLASXXL 178
Query: 630 VQNWDGAL 653
+QNWD A+
Sbjct: 179 MQNWDAAM 186
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,072,192
Number of Sequences: 237096
Number of extensions: 1585130
Number of successful extensions: 7464
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7452
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -