Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A10
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 4e-29
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 60 2e-09
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 46 2e-05
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 46 3e-05
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 45 6e-05
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 40 0.001
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 40 0.002
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 38 0.007
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 37 0.016
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 36 0.038
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.038
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 36 0.038
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.066
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 34 0.087
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 33 0.15
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 32 0.35
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 32 0.35
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 32 0.35
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.46
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 31 0.61
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 31 0.61
SB_9041| Best HMM Match : RRM_1 (HMM E-Value=1.4e-10) 31 0.81
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 31 0.81
SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 29 2.5
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 3.3
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 29 3.3
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 28 5.7
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_54437| Best HMM Match : DUF226 (HMM E-Value=2) 27 9.9
SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30) 27 9.9
SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30) 27 9.9
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 125 bits (301), Expect = 4e-29
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +1
Query: 223 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHXXXXXX 399
E ++LYVGNLDP T+ +C++F +I V CK+I P + PY F+EF H
Sbjct: 365 EEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEA 424
Query: 400 XXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 579
M++R V+DK++KVNWAT+ + DT+NH HIFVGDL+ ++ +LR+ F PFGEI
Sbjct: 425 KFRMDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEI 484
Query: 580 S 582
S
Sbjct: 485 S 485
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Frame = +1
Query: 325 KIIREPGNDP---YAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKT---- 483
+++++P + + F+ F M+ + K++K NWA N +T
Sbjct: 543 RVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPLV 602
Query: 484 -DTSNHHH------IFVGDLSPEIETNILREAFAPFGEISNCRIVRD 603
D H ++VG+L P+++ L++ F+ +G I ++ D
Sbjct: 603 WDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD 649
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 238 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFL 366
T+YVGNL P V + L +F Q G + K+ + G YAF+
Sbjct: 616 TVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKG---YAFI 655
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Frame = +1
Query: 214 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEFTCHX 384
+ + + T+YVG LD V+E + LF Q G V + ++ + Y F+EF
Sbjct: 6 IAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEE 65
Query: 385 XXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFA 564
MN V K ++VN A++ + D ++F+G+L E++ +L + F+
Sbjct: 66 DADYAIKVMNMIKVYGKPIRVNKASA--HNKNLDVG--ANLFIGNLDTEVDEKLLYDTFS 121
Query: 565 PFGEI-SNCRIVRDPQTLKSKGLCF 636
FG I +I+RD T SKG F
Sbjct: 122 AFGVILQTPKIMRDSDTGNSKGFAF 146
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 241 LYVGNLDPSVTEVFLCTLFGQIGDV-KGCKIIR--EPGNDP-YAFLEFTCHXXXXXXXXX 408
L++GNLD V E L F G + + KI+R + GN +AF+ F
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEA 161
Query: 409 MNKRVVLDKEMKVNWA 456
MN + + ++ + V++A
Sbjct: 162 MNGQYLCNRPITVSYA 177
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 50.8 bits (116), Expect = 9e-07
Identities = 29/132 (21%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +1
Query: 217 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP---YAFLEFTCHXX 387
G L + + PS+++ + +FG +G+V CK+IR+ YAF+ +
Sbjct: 21 GTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDD 80
Query: 388 XXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAP 567
MN + +K +KV++A +P + + ++++ L +++ + F P
Sbjct: 81 ANKAVREMNGARLQNKTLKVSFA-----RPSSTEIKNANLYISGLPKDMKEEEVEALFKP 135
Query: 568 FGEISNCRIVRD 603
FG+I ++++D
Sbjct: 136 FGKIITSKVLKD 147
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = +1
Query: 502 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
++ + + P + +++ F G +++C+++RD T +S G F
Sbjct: 28 NLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAF 72
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Frame = +1
Query: 238 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR-EPGNDPYAF--LEFTCHXXXXXXXXX 408
TL V + +T+ +F + + CKI+R +P Y F +++
Sbjct: 48 TLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDK 107
Query: 409 MNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNC 588
+N + +K +KV ++ +P D + +++V ++ ++ R+AF +G I NC
Sbjct: 108 LNGFTIGNKVLKVAFS-----RPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNC 162
Query: 589 RIVRDPQTLKSKGLCFCI 642
R++RD T KG F +
Sbjct: 163 RLLRDKSTGLPKGCGFVL 180
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Frame = +1
Query: 217 GDESHP-KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIRE---PGNDPYAFLEF--TC 378
G ++P +LYVG+L P VTE L F G V ++ R+ + YA++ F
Sbjct: 6 GAANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPG 65
Query: 379 HXXXXXXXXXMNKRVVLDKEMKV-NWATSPGNQPK--TDTSNHHHIFVGDLSPEIETNIL 549
H ++ ++ DK++ V W + K T +++V + +++ +
Sbjct: 66 HDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQM 125
Query: 550 REAFAPFGEISNCRIVRDPQTLKSKGLCF 636
+E A G+I + +++ DP+ KSKG F
Sbjct: 126 KEICAEAGKIVSLKVMTDPEG-KSKGFGF 153
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 475 PKTDTSNHH--HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
P T +N+ ++VGDL+P++ +L E F+ G + + R+ RD T +S G +
Sbjct: 3 PSTGAANYPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAY 58
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +1
Query: 502 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
++++ +L I+ LRE F+P+G IS+ ++++D + SKG F
Sbjct: 213 NLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKG-NSKGFGF 256
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 241 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIR-EPGNDP-YAFLEFTCHXXXXXXXXXMN 414
LY+ NLD + + L F G + K+++ + GN + F+ F+ MN
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 415 KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVG 516
R+++ K + V A + + H H G
Sbjct: 274 GRILISKPLYVALAQRREERKAQLAAQHMHRISG 307
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/127 (25%), Positives = 58/127 (45%)
Frame = +1
Query: 220 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXX 399
D +TL+VGN++ + T L F + G+V I ++PGN+PYAF++F
Sbjct: 244 DPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAIQA 303
Query: 400 XXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 579
M++ V +KV + K + N I+VG ++ + + F +G +
Sbjct: 304 RRKMDREYVGRNRVKVGFG-------KVNPIN--TIWVGGVTNSLSEQQVERHFGRYGRV 354
Query: 580 SNCRIVR 600
+ I R
Sbjct: 355 TKVVINR 361
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Frame = +1
Query: 241 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHXXXXXXXXXM 411
+YVG+++ + E + T F G + + +P N +AF+E+ M
Sbjct: 104 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQM 163
Query: 412 NKRVVLDKEMKVNWATS-PGNQP-----KTDTSNHHHIFVGDLSPEIETNILREAFAPFG 573
N ++ + +KV ++ P P + + + I++ + P++ + ++ F FG
Sbjct: 164 NGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAFG 223
Query: 574 EISNCRIVRDPQTLKSKGLCF 636
++ +C + ++P T K KG F
Sbjct: 224 KVVHCSLSKEPMTGKHKGYGF 244
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +1
Query: 238 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXX-XXXXXXMN 414
TLYVG L+ VTE L F Q G+++ ++ AF+ FT N
Sbjct: 305 TLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQN---CAFVCFTSRAAAEAAADRSFN 361
Query: 415 KRVVLDKEMKVNWATSPGNQPKTDTSNHH 501
K ++ + +K+ W S G QP H
Sbjct: 362 KLILKGRRLKIMWGKSQGQQPAPGRQGGH 390
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 41.5 bits (93), Expect = 6e-04
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 10/151 (6%)
Frame = +1
Query: 214 MGDESHPKTLYVGNLDPSVTEVFLCTLF-----GQIGDVKGCKIIREP--GNDPYAFLEF 372
MGD+S L+VG L+ TE + F G DV + + P + + F+EF
Sbjct: 1 MGDDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEF 60
Query: 373 T-CHXXXXXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 549
+ + +K+++V A + + +F+G L E +
Sbjct: 61 SNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDV 120
Query: 550 REAFAPFGEIS--NCRIVRDPQTLKSKGLCF 636
+ A AP + ++VRD +T K KG CF
Sbjct: 121 KTALAPLSPFAPLEIKMVRDRETNKFKGYCF 151
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +1
Query: 220 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-------YAFLEFTC 378
D + L++GNLD ++E + + Q G+++ + + GN P Y F+EF
Sbjct: 382 DAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFH-GNGPNRGEPRGYCFVEFKK 440
Query: 379 HXXXXXXXXXMNKRVVLDKEMKVNWA 456
+NK++VL + + V+WA
Sbjct: 441 KEDARKALRGLNKKIVLSRALVVDWA 466
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 490 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
+N +VG L+ E++ +L AF PFG+I++ +I D T K +G F
Sbjct: 2 ANKRVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGF 50
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 493 NHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
N IF GDL E+ L AFA + +IVRD ++ KSKG F
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGF 262
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 235 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEF 372
+T++V NLDP +T L + F GD+K ++ + G YA++EF
Sbjct: 72 RTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEF 118
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 463 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCFC 639
PG + H IF+G L + + ++E + FGE+ +V+D T SKG FC
Sbjct: 661 PGVVSTVVPDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFC 719
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 472 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 627
Q T+ +FVG L+ E LRE F +GE+++ ++ D T KS+G
Sbjct: 5 QENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRG 56
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
+FVG + E + LR+ FA FGEI +++D T KSKG F
Sbjct: 12 LFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGF 55
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +1
Query: 430 DKEMKVNWATSP-GNQPKTDTSNHHHIFVGDLS----PEIETNI-LREAFAPFGEISNCR 591
D K SP G +P+T + + VGDL P T ++E F FGEI C
Sbjct: 86 DSASKRKIEESPIGKEPETKITKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCE 145
Query: 592 IVRDPQTLKSKGLCF 636
+ DP T +S+G F
Sbjct: 146 VKLDPNTRRSRGFGF 160
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 232 PKTLYVGNLDPSVTEVFLCTLFGQIGDV 315
PK L+VG L S TE L F Q G+V
Sbjct: 198 PKKLFVGRLPESTTEKTLMEYFAQFGEV 225
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 472 QPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 594
+PK + + +FVG L L E FA FGE+++ I
Sbjct: 190 RPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI 230
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 484 DTSNHHH--IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCFCI 642
D ++ H +F+G+L +IE LRE F G + + R++RD +T KG + +
Sbjct: 49 DKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVL 103
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 627
I++ D P+I + L F P+G I + I+R QT KSKG
Sbjct: 65 IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIR-TQTGKSKG 104
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 35.5 bits (78), Expect = 0.038
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Frame = +1
Query: 235 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMN 414
K L V +LD T L F + G++ G ++ A + F + N
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIVFFRNLKDIKKVVEEN 295
Query: 415 KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEI-ETNILREAFAPFGEISNCR 591
+ K +KV P N+ K +FV +LS + E ++LR F P+G+++
Sbjct: 296 HTI---KGLKVRTVQLP-NEEKQGV-RERTLFVDNLSEDTKELDVLRY-FRPYGQVAKVH 349
Query: 592 IVRDPQTLKSKG 627
I+ D +T KSKG
Sbjct: 350 ILTDRETGKSKG 361
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 475 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 600
PK N +FVG L+ + L++ F FGE+ + RI+R
Sbjct: 72 PKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR 113
Score = 33.1 bits (72), Expect = 0.20
Identities = 30/127 (23%), Positives = 51/127 (40%)
Frame = +1
Query: 223 ESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXX 402
E + ++++VG L E L F Q G+V+ +I+R FL ++ +
Sbjct: 76 EKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-------TFLGYSRNYGFVLFK 128
Query: 403 XXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEIS 582
+ VL K +N T + + N I+VG L +RE F FG I
Sbjct: 129 DDGPSKEVLKKSHVINGKTVDVGKSR----NFRVIYVGGLPSHFTEQTVREHFKKFGVIE 184
Query: 583 NCRIVRD 603
+ + +
Sbjct: 185 AVKFIEN 191
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 547 LREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
LR+ F FGE+ C ++RDP T +S+G F
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGF 153
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 463 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
P + + + +F L+ I L E F+ G++S+ RI+ D + +SKG+ +
Sbjct: 134 PMTEESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAY 191
Score = 34.7 bits (76), Expect = 0.066
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Frame = +1
Query: 220 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHXXX 390
+E +T++ L ++ L F ++G V +II + + A++EFT
Sbjct: 141 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFT-DKSA 199
Query: 391 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHH------IFVGDLSPEIETNILR 552
++ + +L + V + N+ + ++VG L I +++
Sbjct: 200 VPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAMVK 259
Query: 553 EAFAPFGEISNCRIVRDPQTLKSKGLCF 636
F PFG + + +++ D +T +SKG F
Sbjct: 260 AVFEPFGTVDSVQLIYDSETNRSKGYGF 287
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 232 PKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXX 402
P LYVG+L ++TE + +F G V ++I + + Y F++F
Sbjct: 241 PTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
Query: 403 XXMNKRVVLDKEMKVNWATSPGN 471
MN + + +K+ T G+
Sbjct: 301 EQMNGFELAGRPLKIGPVTERGD 323
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 241 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND---PYAFLEFTCHXXXXXXXXXM 411
L+V L+P T+ L +F + G + C++IR+ YAF+EF M
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 412 NKRVVLDKEMKVNWATS 462
+ ++ D+ + V+++ S
Sbjct: 182 DNVLIDDRRIHVDFSQS 198
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 466 GNQPKTDTSNHHHI-FVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
G+ P D ++ FV L+P L F+ FG I +C ++RD +T +S F
Sbjct: 108 GDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAF 165
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCFCI 642
++VG+L + + L + F +G++ I+RD +T +S+G+ F +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFIL 57
Score = 31.9 bits (69), Expect = 0.46
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 238 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREP---GNDPYAFLEFTCHXXXXXXXXX 408
T+YVGNL S+T L +F + G V I+R+ + AF+ F
Sbjct: 11 TVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
Query: 409 MNKRVVLDKEMKVNWATSPGNQPK 480
+NK+ + + +K A G P+
Sbjct: 71 VNKKQMFGRTIKCTIAKDNGRAPE 94
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 484 DTSNHHH---IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
D S H I V +LS E + L+E F P G IS + +D T +SKG F
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAF 226
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 235 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG 345
KTL+V N+ P T++ + LFG+ G VK + ++PG
Sbjct: 42 KTLFVINVPPYCTKLAIKKLFGKCGGVKSVYLHKQPG 78
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 439 MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLK 618
M V T+ G D SN +FVG + E LR F P+G+I I++D T +
Sbjct: 151 MDVKTITNGGTTSVRD-SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQ 209
Query: 619 SK 624
K
Sbjct: 210 HK 211
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRD 603
+FVG +S + LR F+PFG I ++R+
Sbjct: 216 LFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 568 FGEISNCRIVRDPQTLKSKGLCF 636
+GEI N +VRD +T K KG CF
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCF 24
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 214 MGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG--NDPYAFLEF 372
MGD+ K ++V + TE L F + G VK KI+R+ + YAF+ F
Sbjct: 1 MGDQDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITF 55
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 568 FGEISNCRIVRDPQTLKSKGLCF 636
+GEI N +VRD +T K KG CF
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCF 24
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 490 SNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 627
SN +FVG++ ++ L++ F FG++ +I+ D +SKG
Sbjct: 76 SNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 31.9 bits (69), Expect = 0.46
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = +1
Query: 172 IDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGC-----KIIR 336
+ VK VI+ ++ S L + NL + TE L F G+V K+ R
Sbjct: 226 VKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGR 285
Query: 337 EPGNDPYAFLEFTCHXXXXXXXXXMNKRVVLDKEMKVNWA 456
+ F++FT MN + +L + + V+WA
Sbjct: 286 RNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAVDWA 325
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
+F+ +LS + + F FG+I+ C++V D T SKG F
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAF 461
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 238 TLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 333
T+++ NL T+ + LF Q GD+ CK++
Sbjct: 417 TVFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
+FVG LS E L+E F+ +GE+ I D T + +G F
Sbjct: 31 LFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAF 74
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFA-PFGEISNCRIVRDPQTLKSKGLCF 636
IFVG L PE +RE F + + + + + + +G CF
Sbjct: 105 IFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCF 149
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +1
Query: 220 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGN---DPYAFLEFTCHXXX 390
DE P +Y+G++ E + F Q G V ++ R + YAF+EF C
Sbjct: 93 DELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVA 152
Query: 391 XXXXXXMNKRVVLDKEMK 444
M+ ++ + +K
Sbjct: 153 KIAADTMHNYMMFGRLLK 170
>SB_9041| Best HMM Match : RRM_1 (HMM E-Value=1.4e-10)
Length = 141
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 247 VGNLDPSVTEVFLCTLFGQIGDVKGCKIIR 336
+ NL P+V+ + LFG IG +K CK++R
Sbjct: 20 ISNLHPAVSRQDIEELFGAIGVLKSCKMLR 49
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRD 603
+++G LS ++ N+L E F FG + + I+RD
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD 558
>SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 247 VGNLDPSVTEVFLCTLFGQIGDVKGCKIIR 336
+ NL P+V+ + LFG IG +K CK++R
Sbjct: 225 ISNLHPAVSRQDIEELFGAIGVLKSCKMLR 254
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Frame = +1
Query: 220 DESHPKTLYVGNLDPSVT--EVFLC-TLFGQIGDVKGCKIIREPGNDPYAFLEFTCHXXX 390
D +TL+VGNL+ ++ ++ L FG + DV + R GN YAF++F
Sbjct: 232 DPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGN-TYAFVKFADLDVA 290
Query: 391 XXXXXXMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPF 570
M + + +K+ + S Q T ++VG L P I L F F
Sbjct: 291 AKAKCAMQGQCIGRNHIKIGYGRS---QQTT------RLWVGGLGPWISIPELEREFDRF 341
Query: 571 GEI 579
G I
Sbjct: 342 GAI 344
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 547 LREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
+R AF +G I + +V+D T +++G+C+
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCY 68
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 547 LREAFAPFGEISNCRIVRDPQTLKSKG 627
LR F FG+I +IVRD +T ++KG
Sbjct: 69 LRSKFESFGDIEYVQIVRDHKTRENKG 95
>SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 365
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 435 LVEDHSLVHGGQRCGRRRVTRKLEKCIRVISWLPYNLATFYIAYL 301
LV D+S C RRRV R + K I+ + + TF+ ++
Sbjct: 224 LVSDNSFSDSSDECERRRVQRCIRKRIKTTKNILLVVCTFFFCWM 268
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 208 ANMG-DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG-NDPYAFLEF 372
+NM S+ +YVGNL V E L +F + G + + G P+AF+EF
Sbjct: 251 SNMNRSNSNDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEF 307
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDP 606
++VG+L +++ L AF FG +S + R+P
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLSKVWVARNP 39
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCFC 639
+F+G + + + L GEI R+ DP T +KG FC
Sbjct: 155 VFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFC 199
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 463 PGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRI 594
P + K +F+G L I +I+ E F GEI++ RI
Sbjct: 339 PMQKQKEKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRI 382
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGLCF 636
+FVG+L E + +P+G I +VR T SKG F
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGF 158
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 505 IFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 627
+FV ++ E + + + E F+ +GEI N + D +T KG
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKG 335
>SB_54437| Best HMM Match : DUF226 (HMM E-Value=2)
Length = 364
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +1
Query: 163 LVFIDVKKVIDRLR*ANMGDESHPKTLYVGNLDPSVTEVFLCTLF---GQIGDV-KGCKI 330
LV + +KK+ID+ + E HP L +PS F Q+ V K C+
Sbjct: 24 LVIVRIKKIIDQFHLVGIWREKHPNELAYTWCNPSYKVQCRLNYFLISSQLSQVTKDCEN 83
Query: 331 IREPGNDPYAFL 366
+P +D A L
Sbjct: 84 FFDPFSDHSAIL 95
>SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30)
Length = 343
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 348 ISWLPYNLATFYIAYLTKQR 289
I W+PY+ T YI+Y+ K +
Sbjct: 251 ICWVPYHALTLYISYVWKNK 270
>SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30)
Length = 343
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 348 ISWLPYNLATFYIAYLTKQR 289
I W+PY+ T YI+Y+ K +
Sbjct: 251 ICWVPYHALTLYISYVWKNK 270
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 226 SHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKII 333
+H L V NLD VT L F Q GDV+ ++
Sbjct: 123 THAAALRVKNLDNLVTNELLEQAFSQFGDVERAVVV 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,222,135
Number of Sequences: 59808
Number of extensions: 391784
Number of successful extensions: 878
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -