Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A06
         (348 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0371 + 22615809-22617431,22618312-22618422,22619361-226194...    28   2.3  
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    27   4.0  
05_01_0330 - 2591652-2592485                                           27   5.3  
03_06_0034 + 31197846-31198417,31198562-31198987,31199074-311993...    27   5.3  
07_03_0070 + 13045122-13045715                                         26   7.1  
11_06_0095 - 20030237-20031711,20031731-20033057                       26   9.3  
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310...    26   9.3  
02_05_0551 + 29907768-29907909,29907995-29909280                       26   9.3  
01_06_0699 - 31313967-31315106                                         26   9.3  

>09_06_0371 +
           22615809-22617431,22618312-22618422,22619361-22619453,
           22619562-22619661,22619754-22619834,22620774-22621047,
           22621254-22622069,22622921-22623029,22623509-22623602,
           22623881-22623939,22624150-22624197
          Length = 1135

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 82  QLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDI 195
           +L VF P  W  ++  H ++  NI+     +E+   DI
Sbjct: 547 RLTVFYPTLWKTVIASHSQECENIIVLRKMLELRTGDI 584


>11_01_0110 +
           850780-850805,851465-851537,851558-851720,851947-852260,
           852330-852409,852506-852848,853068-853166,853240-853360,
           853567-853723,853976-854099,855275-855368,855866-857259,
           857882-857924,858240-858458,859379-859605,859701-859948,
           860246-860552,860725-861153
          Length = 1486

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 146 LTSCIFIVLWK*LNMTLKIIYKK 214
           LT+C+F ++WK    + KIIY+K
Sbjct: 503 LTTCLFTIIWK--QFSGKIIYQK 523


>05_01_0330 - 2591652-2592485
          Length = 277

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = +2

Query: 272 RCCQGYVI--KEXDVKLLCS 325
           RCC G+V+  K  ++K+LCS
Sbjct: 61  RCCTGFVVDDKSQELKILCS 80


>03_06_0034 +
           31197846-31198417,31198562-31198987,31199074-31199386,
           31199510-31199560
          Length = 453

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 42  STRLVPHLSKRKPTTXSIFAEFLDEISTTTSKTTA*HR 155
           S RLV    +  P+  ++FA  L ++S T   T++ HR
Sbjct: 39  SQRLVYAALRSLPSPRALFASLLSQLSATPFSTSSRHR 76


>07_03_0070 + 13045122-13045715
          Length = 197

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 91  VFLPNFWMKLVRPHPKQLPNIVHFHCSM--EMTKYDIKNYLQKIYEVPVVDVRTKINXGK 264
           +   N  +KL+ P P  L ++  F        +K DI+  L+ +Y   V +VRT    GK
Sbjct: 10  IHFANLPLKLMLP-PAPLSSVQEFAVKTVPSASKVDIRRCLESMYGFSVAEVRTLNMEGK 68


>11_06_0095 - 20030237-20031711,20031731-20033057
          Length = 933

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 178 MTKYDIKNYLQKIYEVPVVDVR 243
           +++ DI+N   KIYE+ V DVR
Sbjct: 57  LSRMDIRNRNNKIYEIWVEDVR 78


>06_03_0766 -
           24425486-24426245,24430766-24430855,24430951-24431070,
           24431568-24431746,24432046-24432231,24432454-24432547,
           24432679-24432743,24433652-24433987
          Length = 609

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 32  FNNVHTAGTPFIKEETHNLXYFCRI 106
           F+ VH+AG   IK+E ++    CRI
Sbjct: 164 FDVVHSAGRKHIKQEGYSYPLCCRI 188


>02_05_0551 + 29907768-29907909,29907995-29909280
          Length = 475

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -3

Query: 343 VIVFGKGTKQLDIXFFNNITLTTSFLISXYLFWSSHPQRVL 221
           V+ +G G+    +   + +TLT S  +  +LF   H Q+ L
Sbjct: 222 VVSYGDGSTTTGVYSSDTLTLTGSNALKGFLFGCGHAQQGL 262


>01_06_0699 - 31313967-31315106
          Length = 379

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 114 HPKIRQKYXKLWVSSLINGVPAVWTLLKLLVLSRG 10
           HP  R        S+LI  VPAV  L  LL+L+ G
Sbjct: 29  HPPSRTSSSPPRRSALITSVPAVLALAFLLILAAG 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,305,990
Number of Sequences: 37544
Number of extensions: 143964
Number of successful extensions: 293
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)