Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_A04
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 41 7e-04
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 41 7e-04
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 36 0.019
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical pr... 29 3.8
>Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical
protein K04D7.3 protein.
Length = 483
Score = 116 bits (279), Expect = 1e-26
Identities = 48/99 (48%), Positives = 73/99 (73%)
Frame = +1
Query: 49 VDEVQTGCGPTGKMWCHEHFDLPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRVFNTWMG 228
VDEVQTG G TG +W H+H++L + PD+VTFSKK+LTGG+++ + AYR++NTWMG
Sbjct: 309 VDEVQTGGGATGDIWAHDHWNLSSPPDMVTFSKKLLTGGYFYGEHLRVKEAYRIYNTWMG 368
Query: 229 DPXKLILLERVLKVIKQENLLDLVNKTGNVLKNGLHDLE 345
DP KL+LLE+ ++VIK++ L++ + G + L +L+
Sbjct: 369 DPTKLLLLEKAVEVIKRDGLIEQSREVGAEFQKRLGELQ 407
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +2
Query: 350 SSLXVIHSVRGRGTFLAYNAPTTETXDXINAGLXKNGVLGGVCGVRAIRLRPALIFEPKH 529
SS + RGRGTF A + P+ D NG+ G CG R++R RP+L++ KH
Sbjct: 409 SSGGKLDQARGRGTFAAVDFPSGSLRDKFVDLAISNGLHCGGCGDRSLRFRPSLVYTKKH 468
Query: 530 AAIYLDVLRXTLKXI 574
+ D+L TLK +
Sbjct: 469 LDLTFDLLDKTLKGL 483
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 60.9 bits (141), Expect = 8e-10
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 43 LFVDEVQTGCGPTG-KMWCHEHFDLPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRV--- 210
+ +DEVQTG G G K W H+ +D PD+VT K M G + A +
Sbjct: 272 MIIDEVQTGFGRIGRKYWAHQLYDDGFLPDIVTMGKPMGNGFPVSAVATRKEIADALGGE 331
Query: 211 ---FNTWMGDPXKLILLERVLKVIKQENLLDLVNKTGNVLKNGLHDLEKE 351
FNT+ G+P + V+KV+K ENLL+ + G L+ L DL+K+
Sbjct: 332 VGYFNTYGGNPVACAAVISVMKVVKDENLLEHSQQMGEKLEVALRDLQKK 381
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 41.1 bits (92), Expect = 7e-04
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Frame = +1
Query: 43 LFV-DEVQTGCGPTGKMWCHEHFDLPTSPDVVTFSKKMLTGGFY----------FTADFK 189
LF+ DEVQ+G G +GK+ H H ++ PD+V K L+GGFY + K
Sbjct: 240 LFITDEVQSGLGRSGKLLAHYHDNV--RPDIVVLG-KALSGGFYPVSAVLCDDNVMMNIK 296
Query: 190 P-PHAYRVFNTWMGDPXKLILLERVLKVIKQENLLDLVNKTGNVLKNGLHDLEKE 351
P H +T+ G+P + L+++++E L++ G++L + L L K+
Sbjct: 297 PGEHG----STYGGNPLACKVAIAALEILQEEKLVENSAVMGDLLMSKLKTLPKD 347
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 41.1 bits (92), Expect = 7e-04
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Frame = +1
Query: 43 LFV-DEVQTGCGPTGKMWCHEHFDLPTSPDVVTFSKKMLTGGFY----------FTADFK 189
LF+ DEVQ+G G +GK+ H H ++ PD+V K L+GGFY + K
Sbjct: 175 LFITDEVQSGLGRSGKLLAHYHDNV--RPDIVVLG-KALSGGFYPVSAVLCDDNVMMNIK 231
Query: 190 P-PHAYRVFNTWMGDPXKLILLERVLKVIKQENLLDLVNKTGNVLKNGLHDLEKE 351
P H +T+ G+P + L+++++E L++ G++L + L L K+
Sbjct: 232 PGEHG----STYGGNPLACKVAIAALEILQEEKLVENSAVMGDLLMSKLKTLPKD 282
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 36.3 bits (80), Expect = 0.019
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +1
Query: 52 DEVQTGCGPTGK-MWCHEHFDLPTSPDVVTFSKKMLTG---GFYFT----ADFKPPHAYR 207
DEVQTG G G W E D PD+VT +K + G G T AD Y
Sbjct: 260 DEVQTGFGRLGSHFWGFESQD--ALPDMVTMAKGIGNGFPLGAVVTSKEIADSFNKSLY- 316
Query: 208 VFNTWMGDPXKLILLERVLKVIKQENL 288
FNT+ G+P ++ + VL+VI++E L
Sbjct: 317 -FNTYGGNPLASVVGKAVLEVIEEEKL 342
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 112 LPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRVFNTWMGD--PXKLILLERVLKVIKQEN 285
L S ++ + + T G T DF P V W D P I + R K I+++
Sbjct: 707 LDESSTLLPTATVVATSGNPLTLDFDNPSKIVVAPIWTDDTGPLMPISMYRTDKKIERKL 766
Query: 286 LLDLVNKTGNVLKNGLH 336
+LD V K ++ NG H
Sbjct: 767 MLDPVPKPVELMSNGTH 783
>Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical
protein C35A5.5 protein.
Length = 520
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 55 EVQTGCGPTGKMWCHEHFDLPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRVFNTWMGDP 234
+V T G MW HE +++PT+ V+ S ++ D P +YR+ N M +
Sbjct: 353 KVMTKPGNLNSMWIHESWNIPTNRHHVSKSNYIIHMQKPVDPDGTDPVSYRMSNFEMLES 412
Query: 235 XKL 243
+L
Sbjct: 413 MQL 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,580,171
Number of Sequences: 27780
Number of extensions: 295037
Number of successful extensions: 641
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -