Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A04
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    25   0.48 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    25   0.48 
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   7.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.8  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 240 IDFTRARSQGHQTGKLAGFSQQDRKRFEKWPTRSGKG 350
           +D  ++ + GH   K  G  ++  ++FEK     GKG
Sbjct: 16  VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 52


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 240 IDFTRARSQGHQTGKLAGFSQQDRKRFEKWPTRSGKG 350
           +D  ++ + GH   K  G  ++  ++FEK     GKG
Sbjct: 16  VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 52


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 526 TCCYLFGCSAEXLEXNIXSELVLAIRNSN 612
           +C    GCSAE  E +  S   L  RNS+
Sbjct: 86  SCNKCIGCSAEKFECSKTSNPCLPHRNSD 114


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 373 TMYYXQGTPFPDR 335
           TM Y  G PFP R
Sbjct: 298 TMTYSNGLPFPQR 310


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 373 TMYYXQGTPFPDR 335
           TM Y  G PFP R
Sbjct: 298 TMTYSNGLPFPQR 310


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 346 FPDRVGHFSKRF 311
           FPD V H ++RF
Sbjct: 392 FPDEVQHLARRF 403


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 652 YKLNSL**LYNKIHWNYGWLIPTRXLYXF 566
           YKLN +   Y  ++  YG L     L+ F
Sbjct: 74  YKLNKIHDAYKDLNQRYGALCKEEALWNF 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,150
Number of Sequences: 438
Number of extensions: 3556
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)