Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_A03
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   373   e-103
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   373   e-103
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   372   e-103
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   372   e-103
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   266   2e-71
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   6.7  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  373 bits (918), Expect = e-103
 Identities = 169/181 (93%), Positives = 175/181 (96%)
 Frame = +3

Query: 78  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 257
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 258 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGA 437
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL TGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 438 FGKPQGTVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYER 617
           FGKPQGTV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVS KWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 618 D 620
           +
Sbjct: 192 E 192


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  373 bits (918), Expect = e-103
 Identities = 169/181 (93%), Positives = 175/181 (96%)
 Frame = +3

Query: 78  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 257
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77

Query: 258 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGA 437
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL TGMRGA
Sbjct: 78  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 137

Query: 438 FGKPQGTVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYER 617
           FGKPQGTV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVS KWGFTKYER
Sbjct: 138 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 197

Query: 618 D 620
           +
Sbjct: 198 E 198


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  372 bits (916), Expect = e-103
 Identities = 169/179 (94%), Positives = 174/179 (97%)
 Frame = +3

Query: 84  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 263
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 264 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGAFG 443
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL TGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 444 KPQGTVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERD 620
           KPQGTV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVS KWGFTKYER+
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 179


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  372 bits (916), Expect = e-103
 Identities = 169/179 (94%), Positives = 174/179 (97%)
 Frame = +3

Query: 84  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 263
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 264 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGAFG 443
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL TGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 444 KPQGTVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERD 620
           KPQGTV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVS KWGFTKYER+
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERE 179


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  266 bits (651), Expect = 2e-71
 Identities = 133/181 (73%), Positives = 142/181 (78%)
 Frame = +3

Query: 78  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 257
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 5   VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64

Query: 258 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGA 437
           QLSSEALEAGRICCNK ++   G D+    MR                          GA
Sbjct: 65  QLSSEALEAGRICCNK-MLSCAGADRLQTGMR--------------------------GA 97

Query: 438 FGKPQGTVXRVRIGQPIMSVRSXDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYER 617
           FGKPQGTV RVRIGQPIMSVRS DR+KAQVIEALRRAKFKFPGRQKIYVS KWGFTKYER
Sbjct: 98  FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 157

Query: 618 D 620
           +
Sbjct: 158 E 158


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 282 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 142
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,708,008
Number of Sequences: 53049
Number of extensions: 664900
Number of successful extensions: 1907
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1906
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)