Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P23
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 3e-27
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 112 3e-25
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 83 1e-16
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 72 4e-13
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 53 2e-07
SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91) 52 4e-07
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 47 1e-05
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 47 1e-05
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 44 8e-05
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 43 2e-04
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 42 4e-04
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 42 4e-04
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 42 6e-04
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 42 6e-04
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 41 8e-04
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 41 8e-04
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 41 8e-04
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 41 8e-04
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 41 8e-04
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 41 0.001
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 40 0.001
SB_54214| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 40 0.002
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 40 0.002
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 40 0.002
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 40 0.002
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 39 0.003
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 39 0.003
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 39 0.004
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 39 0.004
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 38 0.005
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 38 0.005
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 38 0.005
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 38 0.007
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 38 0.007
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 38 0.009
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 37 0.012
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 37 0.012
SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01) 37 0.016
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 37 0.016
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 37 0.016
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 36 0.022
SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 36 0.029
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 36 0.029
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 36 0.038
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 36 0.038
SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029) 35 0.050
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 35 0.050
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08) 35 0.050
SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07) 35 0.066
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 35 0.066
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 34 0.087
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 34 0.087
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 34 0.12
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 34 0.12
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12) 34 0.12
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 33 0.15
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 33 0.15
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 33 0.20
SB_53040| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 33 0.20
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 33 0.27
SB_29534| Best HMM Match : cNMP_binding (HMM E-Value=7.8) 33 0.27
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 32 0.35
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 32 0.47
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 32 0.47
SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028) 32 0.47
SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23) 31 0.62
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 31 0.81
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14) 31 1.1
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 30 1.4
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 30 1.4
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 30 1.4
SB_48473| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 30 1.9
SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12) 29 3.3
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 29 3.3
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 29 3.3
SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064) 29 3.3
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 29 3.3
SB_33424| Best HMM Match : zf-B_box (HMM E-Value=2.2e-18) 29 4.3
SB_18516| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 29 4.3
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 28 5.7
SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 28 5.7
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 118 bits (285), Expect = 3e-27
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Frame = +1
Query: 301 QRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
+R L ++N HI C LC GY + ATTIVECLHSFCRSCI+ L+A +CPVC+ ++ +
Sbjct: 1353 RRMALKDLNPHIICVLCGGYLVDATTIVECLHSFCRSCIVSWLQASYHCPVCDTEVHKTR 1412
Query: 481 P--NIKLDKALQDIVYKLVPGLFQKEMERRQHF 573
P NI+ D LQDIVYKLVPGL+Q+E+ R+ F
Sbjct: 1413 PFLNIRPDCVLQDIVYKLVPGLYQRELNYREEF 1445
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 112 bits (269), Expect = 3e-25
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Frame = +1
Query: 304 RTL-LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
RTL L E+N HI C LC GY + ATTI+ECLHSFCR CI+++L+ CPVC+ I+ +
Sbjct: 3 RTLSLKELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVCDAEIHKTR 62
Query: 481 P--NIKLDKALQDIVYKLVPGLFQKEMERRQ 567
P NI+ D LQDIVYK+VPG++ +E +RR+
Sbjct: 63 PLLNIRADNVLQDIVYKVVPGMYFEEKKRRK 93
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 83.4 bits (197), Expect = 1e-16
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +1
Query: 277 NSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
N +++ + + L E+N HI C LC GY + ATTI+ECLHSFCR CI+++L+ CPVC
Sbjct: 27 NEDISTMLRTLSLKELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 86
Query: 457 EMMINSAKPNIKL 495
+ I+ +P + +
Sbjct: 87 DAEIHKTRPLLNI 99
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 72.1 bits (169), Expect = 4e-13
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 26/108 (24%)
Frame = +1
Query: 301 QRTL-LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLK--AKSYCPVCEMMIN 471
+RTL L ++N ITC LC GY I TTI ECLH+FC+SCI+ +L+ + CP C +I+
Sbjct: 50 ERTLKLSDLNPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSCNTVIH 109
Query: 472 SAKP-----------------------NIKLDKALQDIVYKLVPGLFQ 546
P I+ D+ L+DIV+KLVPGL Q
Sbjct: 110 ETNPFDLLRYMTGTMLGRGEDIEHPFRLIRSDQTLEDIVFKLVPGLQQ 157
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +1
Query: 301 QRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
+++++ E+ + +C +C +I ATT+ C HSFC C+ L+ ++ CP+C + S
Sbjct: 358 RKSVVEEMEDEFSCIVCQELFIRATTLT-CSHSFCEYCLQSWLRKRNTCPICRCAVQSQP 416
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERRQHFYASRPXQAATATPXXXXEXT 633
+I LD A + K+V + ERR+ R ++ + T
Sbjct: 417 VRSIVLDNA----IAKMVDSMDVASKERRRAVMEERAEKSRELAQSSGSQRT 464
>SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91)
Length = 399
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 277 NSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSC 414
N +++ + + L E+N HI C LC GY + ATTI+ECLHS+ +C
Sbjct: 26 NEDISTMLRTLSLKELNPHIICVLCGGYLVDATTIIECLHSWQITC 71
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS---YCPVCEMMINSAKPNIK 492
+N+ + C +C + T+ CLHSFC+ C+ K L +S +CP+C + +K
Sbjct: 62 LNDELRCSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRKKTAVPRRGVK 121
Query: 493 LDKALQDIVYKLVPGLFQKEMERRQH 570
L ++ +LV + M +H
Sbjct: 122 -GLPLNSVIRRLVDVHSSEGMTSARH 146
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHL-KAKSYCPVCEMMINS-AKPNIK--- 492
E TCP+C + ++ C H FC+ C +++ +A CP+C + I+S A+ N +
Sbjct: 33 EDFTCPICLQLLVEPV-VLPCEHEFCKMCFTQNVQEANLQCPMCRIRISSWARRNARNGT 91
Query: 493 -LDKALQDIVYKLVPGLFQKEMERRQHFYASRP 588
+D+ D + KL P +K + + F P
Sbjct: 92 LVDRKRWDRIKKLFPKRCEKRIRGEEDFEDDHP 124
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQDIV 519
C LC + T + C HSFCR C+ + L + CP C + K + +A+ ++
Sbjct: 330 CKLCFNLLLEPVTSL-CGHSFCRDCLYRSLDHRVECPCCRAPL--TKILAERRQAVTSVL 386
Query: 520 YKLVPGLFQKEMERRQHFYAS 582
++ F + E+R++ YA+
Sbjct: 387 DGMIKDFFPVQYEKRKNLYAA 407
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSY-CPVC----EMMINSAKPNI 489
+TC LC G Y ++ CLH++CR C +++H K + CP C E+ + K ++
Sbjct: 15 VTCSLCLGQY-QDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISVEEVK-SL 72
Query: 490 KLDKALQDIVYKL 528
K+D L D++ K+
Sbjct: 73 KVDFMLIDLIEKM 85
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC-EMMINSAKP 483
V + CP C I I+ CLHS C++C+ K L CPVC E +N P
Sbjct: 13 VGVSLYCPACSNV-IKDPRILPCLHSICKTCLEKQLNGCLKCPVCSEHAVNIKSP 66
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC LC ++ ++ CLHSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSLCIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
P++K++ + I+ ++P L ++ +++
Sbjct: 68 VPSLKVNFMINSII-SVLPLLTSEDSKKK 95
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC LC ++ ++ CLHSFCR C+ + H K K CP+C E I+ A
Sbjct: 129 LEDEVTCSLCIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGKGKLVCPLCKSEFQISPAD 187
Query: 481 -PNIKLDKALQDIVYKLV 531
P++K++ + I+ L+
Sbjct: 188 VPSLKVNFMINSILSVLL 205
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 301 QRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCI---IKHLKAKSY-CPVC 456
++TL G +N+ +CP+C ++ ++ C H+ CR C+ ++K CPVC
Sbjct: 10 EKTLSGVINDECSCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVC 65
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ CLHSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
P++K++ + I+ ++P L ++ +++
Sbjct: 68 VPSLKVNFMINSII-SVLPLLTSEDSKKK 95
>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
Length = 63
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMM 465
V E + C +C Y + C H C C ++ L AK CP C M+
Sbjct: 5 VTEKVKCLICMEPYTVPLVSISCWHVHCEECWLRTLGAKKLCPQCNMI 52
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 265 VKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSY 444
V+ D+ ++ P ++ N ++ CPLC + ++ CLH+FC+ C+ + +S+
Sbjct: 120 VQRDDLDLGPTPDSPMMPGSNVNLFCPLCHEMFANPR-LLPCLHTFCKRCLENLVPPRSH 178
Query: 445 ---CPVCEM 462
CP C +
Sbjct: 179 TLSCPSCRL 187
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSY-CPVC-EMMINSAK--PNIK 492
+TC LC Y ++ CLH++CR C +++H + ++ CP C E ++ S + ++K
Sbjct: 15 VTCSLCLEQY-QDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVKDLK 73
Query: 493 LDKALQDIVYKL 528
+D L D++ K+
Sbjct: 74 VDFMLNDMIRKM 85
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
CP+C T+ C H+FCR CI + K+ CP C
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 716
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
CP+C T+ C H+FCR CI + K+ CP C
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 791
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSY-CPVC-EMMINSAK--PNIK 492
+TC LC Y ++ CLH++CR C +++H + ++ CP C E ++ S + ++K
Sbjct: 15 VTCSLCLEQY-QDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVKDLK 73
Query: 493 LDKALQDIVYKL 528
+D L D++ K+
Sbjct: 74 VDFMLNDMIKKM 85
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVECLHSFCRSC---IIKHL-KAKSYCPVCEMMINSAK-- 480
++ + +TC +C ++ ++ CLH+FCR C + +H K K CP+C++ A
Sbjct: 8 QLEDEVTCAICIEHFTDPR-LLPCLHTFCRHCLEDLAEHSGKGKLVCPLCKVEYEIAVAD 66
Query: 481 -PNIKLDKALQDIV 519
P++K++ + +++
Sbjct: 67 IPSLKVNFPINNLI 80
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C + + ++ CLHSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSICIEH-LNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
P++K++ + I+ ++P L ++ +++
Sbjct: 68 VPSLKVNFMINSIL-SVLPLLTSEDSKKK 95
>SB_54214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 304 RTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRS 411
R + ++N H C LC GY I TI EC+H+ C+S
Sbjct: 46 RVKVTDLNPHFICKLCNGYLINPVTITECIHT-CKS 80
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ C HSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
P++K++ + I+ ++P L ++ +++
Sbjct: 68 VPSLKVNFMINSII-SVLPLLTSEDSKKK 95
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ C HSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
P++K++ + I+ ++P L ++ +++
Sbjct: 68 VPSLKVNFMINSII-SVLPLLTSEDSKKK 95
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSY-CPVC----EMMINSAKPNI 489
+TC LC Y ++ CLH++CR C +++H K + CP C E+ + K ++
Sbjct: 24 VTCSLCLEQY-QDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISVEEVK-SL 81
Query: 490 KLDKALQDIVYKL 528
K+D L D++ K+
Sbjct: 82 KVDFMLIDLIEKM 94
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ C HSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
P++K++ + I+ ++P L ++ +++
Sbjct: 68 VPSLKVNFMINSII-SVLPLLTSEDSKKK 95
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC LC ++ ++ CLHSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSLCIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
++K++ + I+ ++P L ++ +++
Sbjct: 68 VSSLKVNFMINSII-SVLPLLTSEDSKKK 95
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +1
Query: 247 ISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKH 426
+S KV M NS ++V+P T + + C +C EC H C CI H
Sbjct: 68 VSSLKVNFMINSIISVLPLLTS-EDSKKKTVCQMCDSGEPAQGRCNECDHFVCEQCISAH 126
Query: 427 LKAK 438
+ +
Sbjct: 127 KRLR 130
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +1
Query: 307 TLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSY----CPVC 456
TLLG+ CP+C ++ ++ C H+ CR C+ K K S CP+C
Sbjct: 14 TLLGDEG---ACPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPIC 64
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVCEMMINSAKP 483
+ + +TC +C ++ ++ C HSFCR C+ + H + K CP+C+ SA P
Sbjct: 9 LQDEVTCSICIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQSALP 66
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIK-----HLKAKSYCPVC--EMMINSAK-PNI 489
+TC LC + ++ CLH++C+ C+ K + YCP C E+ I A+ N+
Sbjct: 14 VTCLLCLDIFTDPR-LLPCLHTYCKKCLEDLVSQCQKKGEIYCPQCRHEVKITCAQVSNL 72
Query: 490 KLDKALQDIVYKL 528
K++ DI+ L
Sbjct: 73 KINTVANDIIAAL 85
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEM----MINSAKPN 486
E N C +C + + +CLH FC +C ++H K S C VC + + N AK
Sbjct: 238 EDNLPFACIMCRKTF-KNPVVTKCLHYFCEACALQHYKKNSKCFVCGVQTYGVFNPAKDI 296
Query: 487 IK 492
IK
Sbjct: 297 IK 298
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +1
Query: 310 LLGEVNEH--ITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS---YCPVCEMMI 468
L+ + +H + C +C Y ++ CLHSFC++C+ K ++++ CP C+ +
Sbjct: 5 LVNRIQDHYRLVCGICQETY-NNPKVLPCLHSFCQNCLDKSIRSQERVLVCPTCQCSV 61
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSY-CPVCEMMINSAKPNI 489
+ + I+CP+C + + +C H+ CR C II+ + + + CP+C ++ K I
Sbjct: 19 IQDEISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIVAVPKDGI 78
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC LC ++ ++ C HSFCR C+ + H K K CP+C E I+ A
Sbjct: 9 LEDEVTCSLCIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGKGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLD 498
P++K++
Sbjct: 68 VPSLKVN 74
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSY--CPVCEMMINS 474
+G++++++ C +C G A T + C HSFC SC+ L CP C + S
Sbjct: 9 VGKIDQNLLCNICVGVLENAITTI-CGHSFCESCLETWLSRPEVQSCPSCRSHVLS 63
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ C HSFCR C+ + H + K CP+C E I+ A
Sbjct: 8 LEDEVTCSICIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 66
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERR 564
P++K++ + I+ ++P L + +++
Sbjct: 67 VPSLKVNFMINSIL-SVLPLLTSDDSKKK 94
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ CLHSFCR C+ + H + K CP+C E I+ A
Sbjct: 14 LQDEVTCSICIEHF-DDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 72
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERRQ 567
++K++ + I+ ++P LF E +++
Sbjct: 73 VSSLKVNFMINSII-SVLP-LFTSEDSKKK 100
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 247 ISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKH 426
+S KV M NS ++V+P T + + C +C EC H C CI H
Sbjct: 73 VSSLKVNFMINSIISVLPLFTS-EDSKKKTVCQMCDSGEPAQGRCNECDHFVCEQCISAH 131
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ CLHSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLDKALQDIVYKLVPGLFQKEMERRQ 567
++K++ + I+ L LF E +++
Sbjct: 68 VSSLKVNFMINSIISVL--SLFTSEDSKKK 95
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSY-CPVC--EMMINS 474
+G+V + +TC LC Y ++ CLH++CR C + +H + S CP C ++ I+
Sbjct: 8 VGDVKD-VTCCLCLEQY-QDPRVLACLHTYCRHCLESLAEHSQGDSISCPQCREKIQISV 65
Query: 475 AK-PNIKLDKALQDIVYKLVPGLFQKEME 558
K N+K D L +++ ++ +K+ E
Sbjct: 66 DKVQNLKEDFLLSNLIKRISLSQGKKDEE 94
>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQ 510
CP+C I + + C H CRSCI +HL C C+ ++++ D+A++
Sbjct: 430 CPICCAMRI-SVRFLPCRHVSCRSCITRHLMNNKECFFCKEVVDTLAEISADDQAIK 485
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = +1
Query: 334 ITCPLC-----XGYYIXATTIVECLHSFCRSCI--IKHLKAKSY-CPVCEM 462
+TCPLC GY I++C H+FC CI IK L+ CP C++
Sbjct: 328 LTCPLCYTAYGTGYPQRIPRILDCSHTFCTECIMKIKELQGDVVECPTCKL 378
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSY-CPVCEMMINSAK 480
+G+V + +TC LC Y ++ CLH++CR C +++H K + CP C I +
Sbjct: 8 VGDVKD-VTCCLCLEQY-QDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISV 65
Query: 481 PNI---KLDKALQDIVYKLV 531
+ K++ L+D++ ++
Sbjct: 66 DEVEELKVNFMLKDLIENML 85
>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
LL + + ++C +C G + CLH CR C+ K ++ P C +N
Sbjct: 31 LLPRLRQSLSCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN------ 81
Query: 490 KLDKALQDIVYKLVPGLFQKEME 558
LDK ++D K+V ++K E
Sbjct: 82 -LDKLVEDRQTKIVLACYRKLCE 103
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
LL + + ++C +C G + CLH CR C+ K ++ P C +N
Sbjct: 31 LLPRLRQSLSCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN------ 81
Query: 490 KLDKALQDIVYKLVPGLFQKEME 558
LDK ++D K+V ++K E
Sbjct: 82 -LDKLVEDRQTKIVLACYRKLCE 103
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 304 RTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSY-----CPVCEMMI 468
+++L + E +TC C + I CLHSFC C+ + +++ Y CP C+ I
Sbjct: 4 QSILENLEELLTCRQCSNVF-KNPRITPCLHSFCAECLNEIARSRPYQAYIACPTCKYEI 62
>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
Length = 413
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSY--CPVCEMMINSAKPNIKL 495
+ E I CP+C + + C H+ C SC+ K + + CP+C P L
Sbjct: 16 LQEEICCPICTEIFETPKCLPVCAHNVCLSCLKKMKIEQGFIKCPICRKKTKITNPAESL 75
Query: 496 -DKALQDIVYKLVPGLFQKEMERRQHFYASR 585
+L + + PG ++E+E R+ ++
Sbjct: 76 PTNSLLVRLVENAPGR-KEELELRKELKTAK 105
>SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01)
Length = 527
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 301 QRTLLGEVN-EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
+R L EV + CP+C + H+ C +C+ + L S CPVC+ +++S
Sbjct: 238 ERFELNEVRKDDFYCPICSELLDKPVETI-FTHNACDACLTQALAVNSLCPVCKTILSSG 296
Query: 478 KPNIKLDKALQDIV 519
K ++ L ++
Sbjct: 297 DDIKKFNRTLLGLI 310
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVCE 459
+ + +TC +C ++ ++ CLHSFCR C+ + H + K CP+C+
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
E C LC + T C H FCR+C+ + L + CP+C
Sbjct: 375 EEFECTLCCRLFYNPVT-TPCGHVFCRACLNRSLDHRPGCPIC 416
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVCE 459
+ + +TC +C ++ ++ CLHSFCR C+ + H + K CP+C+
Sbjct: 8 LEDEVTCSICIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 57
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 328 EHITCPLCXGYYI--XATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
E +CP+C + T ++ C H +C C+ + L+ + CP+C
Sbjct: 258 ESKSCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPIC 302
>SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 35.9 bits (79), Expect = 0.029
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 301 QRTLLGEVN-EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
+R L EV + CP+C + H+ C +C+ + L S CPVC+ +++S
Sbjct: 98 ERFELNEVRKDDFYCPICSELLDKPVETI-FTHNACGACLTQALAVNSSCPVCKTILSSG 156
Query: 478 KPNIKLDKALQDIVYKLVPGLFQK 549
K ++ QDI KL+ G +++
Sbjct: 157 DDIKKFNQ--QDI--KLLCGYYRE 176
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQDIV 519
C C G I C H C C K L + + CP C +N P+I DKA + +
Sbjct: 431 CLDCEGLLWYPVQIKPCGHRVCTKCYTKLLSSSARCPGCMDELNENIPDI--DKAFHEEI 488
Query: 520 YKL 528
+L
Sbjct: 489 QEL 491
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 307 TLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHL-----KAKSYCPVCEMMIN 471
+L+ + E + CP+C G Y ++ C HSFC C+ + L K CP C +
Sbjct: 9 SLVRGLAEQLMCPVCLGEY-KNPMLLRCYHSFCLRCVQELLHQSGEKGVVKCPQCRTEME 67
Query: 472 SAKPNIK 492
++K
Sbjct: 68 IPNSDVK 74
>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
Length = 229
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 301 QRTLLGEVN-EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
+R L EV + CP+C + H+ C +C+ + L S CPVC+ +++S
Sbjct: 119 KRFELNEVRKDDFYCPICSELLDKPVETI-FTHNACGACLTQALAVNSSCPVCKTILSSG 177
Query: 478 KPNIKLDKALQDIV 519
K ++ L ++
Sbjct: 178 DDIKKFNRTLLGLI 191
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKA-KSYCPVCEMMI 468
++ + + C +C A ++ CLH++CR C II H ++ +++CP C I
Sbjct: 138 DIRQQLACGICHALLRDAR-VLPCLHTYCRRCIEDIILHRQSVRAHCPSCNREI 190
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSYCPVCEMMINSAKPNI 489
E+++H+ C LC I ++ CLHSFC +C ++ CP C +K +
Sbjct: 13 ELSKHLNCSLCHRL-IRGPKLLPCLHSFCLACLEDLVTENDVGFNCPQCHTEAKVSKAAL 71
Query: 490 K 492
+
Sbjct: 72 R 72
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVCE 459
+TC +C ++ ++ CLHSFCR C+ + H + K CP+C+
Sbjct: 13 VTCSICIEHF-NDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIK-----HLKAKSYCPVCE 459
E +TC C G+Y + CLH+FC C+ K L + CP C+
Sbjct: 14 ERLTCSACKGFYKNPKRL-PCLHAFCCHCLKKTQRGTKLCERMRCPTCD 61
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 295 VPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HLKAKSYCPVC 456
+ ++ + +V E +TC +C + ++ C H+FC+ C+ K + CP C
Sbjct: 7 ISSQSSIEKVREELTCSVCLEQF-REPKMLPCFHTFCKECLEKTKQSFRGNLLCPTC 62
>SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029)
Length = 232
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 301 QRTLLGEVN-EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
QR L E+ + CP+C + H+ C +C+ + L S CPVC+ +++S
Sbjct: 72 QRFELNEIRKDDFYCPICCELLDKPVETI-FTHNACGACLTQALAVNSSCPVCKTILSSG 130
Query: 478 KPNIKLDKALQDIV 519
K + L ++
Sbjct: 131 DDIKKFNHTLLGLI 144
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 35.1 bits (77), Expect = 0.050
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEM 462
CPLC T + C + FC CI ++L CPV +
Sbjct: 1201 CPLCAKVRTNPTALSTCGYVFCYPCIYRYLGQHGCCPVTHL 1241
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVCE 459
+ + +TC +C ++ ++ C HSFCR C+ + H + K CP+C+
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 337 TCPLCXGYYIX--ATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
+CP+C G Y +T + C H F CI+ L+ + CPVC
Sbjct: 61 SCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVC 102
>SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08)
Length = 230
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 316 GEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLK--AKSYCPV--CEMMINSAKP 483
G + +I CP+C + I H FCRSC++ HL+ CP+ E+ + +P
Sbjct: 11 GPADPNIICPICQ-FIIEDAVCCPQGHIFCRSCVVVHLQQFGNGNCPLDRSELSLEDIRP 69
>SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07)
Length = 137
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKA-KSYCPVCEMMINSAKPNIKL 495
E +H+ CP+C ++ I EC H C+ C ++ + CP C ++ P++
Sbjct: 49 EERKHL-CPVCEDIFVSPVQIKECGHRLCQHCYKTIWRSPEPKCPKCSGDLDDKIPDV-- 105
Query: 496 DKALQDIVYKL 528
D+A ++ + +L
Sbjct: 106 DQAFENDMNEL 116
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCII-----KHLKAKSYCPVCEMMI 468
++ + + + CP+C + ++ CLH+FC C++ + K CP C+M++
Sbjct: 6 IVERLQKEVECPICLERF-KDPRVLPCLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + + C +C ++ ++ C HSFCR C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVRCSICIEHF-NDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 -PNIKLD 498
P++K++
Sbjct: 68 VPSLKVN 74
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCII-----KHLKAKSYCPVCEMMI 468
+ + + CP+C + ++ CLH+FC C++ + K CP C+M++
Sbjct: 10 LQKEVECPICLERF-KDPRVLPCLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCP 450
+G VNE + C +C + + C HS+C +C++ L + CP
Sbjct: 9 VGAVNEGLLCCICRDV-LEEPLMAPCEHSYCSACVLGWLTHYNTCP 53
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 394 HSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKL 495
H FC C+ L+ YCP C IN +P K+
Sbjct: 120 HVFCSPCLDLWLRTNRYCPTCRTPINQDQPVKKI 153
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +1
Query: 307 TLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS----YCPVC 456
TLLG+ CP+C + ++ C H+ CR C+ K S CP+C
Sbjct: 14 TLLGDEG---ACPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPIC 64
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIK---HLKAKSYCPVCE 459
C +C Y + CLHSFC+ C+ K + K CP C+
Sbjct: 405 CGVCRETYTDPR-VAPCLHSFCKECVTKLVTERQGKFVCPDCQ 446
>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
Length = 549
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS---YCPVC----EMMIN 471
L ++ E I C C G + ++ CLHS C+ C+ +A+ CPVC E +
Sbjct: 12 LEDLPEEIWCRYCNGIF-EDPRLLPCLHSLCKKCLKDIEQAQEGAIACPVCLTDVECHLE 70
Query: 472 SAKPNIKLDKALQD 513
PN+ L++
Sbjct: 71 ELLPNVLARSKLKE 84
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HL--KAKSYCPVC--EMMINSAK 480
+ + +TC +C ++ ++ C HSFC C+ + H + K CP+C E I+ A
Sbjct: 9 LEDEVTCSICIEHF-NDPRVLPCFHSFCLHCLEELAVHSEGRGKLVCPLCKAEFQISPAD 67
Query: 481 P-NIKLDKALQDIVYKLVPGLFQKEMERR 564
++K++ + I+ ++P L ++ +++
Sbjct: 68 VLSLKVNFMINSII-SVLPLLTSEDSKKK 95
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCI---IKHLKAKSYCPVC 456
E I+CP+C + + C HS C C+ K CPVC
Sbjct: 19 EEISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVC 64
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS----YCPVCEMMINSAKPNIK 492
+ + CP+C + T+ C+H CR C+ +S CP+C I+ + +K
Sbjct: 17 DELLCPICLDEFKEPKTL-SCMHDLCRKCLEDMAARESSRVIRCPLCRSEIDIPRGGVK 74
>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 158
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +1
Query: 226 KMVTSNIISDK-KVVKMDNSNVAVVPQRTLLGEVNEH---ITCPLCXGYYIXATTIVECL 393
K V +S K K+ K ++ LL EV ++ +TCP C A + +C
Sbjct: 64 KRVQEECVSLKRKLEKQKKIDLYGAADEVLLEEVRQYKARLTCPCCNTRKKDAI-LTKCF 122
Query: 394 HSFCRSCI-IKHLKAKSYCPVCEMMINS 474
H FC C+ ++ + CP C S
Sbjct: 123 HVFCYECLKTRYDTRQRKCPKCNATFGS 150
>SB_53040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 301 QRTL-LGEVNEHITCPLCXGYYIXATTI 381
+RTL L ++N ITC LC GY I TTI
Sbjct: 17 ERTLKLSDLNPFITCGLCEGYLIKPTTI 44
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 319 EVNEHITCPLC----XGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPN 486
+++ H+ CPLC G ++ C H+FC+ C K CP C+M + + N
Sbjct: 229 DMSTHL-CPLCQTLMSGSRHTPVALIPCGHTFCQMCTRDCRK----CPDCQMRVKATAVN 283
Query: 487 IKLDKALQD 513
+ + + D
Sbjct: 284 TVMQQIIGD 292
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPV-CEMM 465
L V + C +C G + + C H FC C++ + CP+ CE +
Sbjct: 48 LDPVEDDFKCGICFGV-LEDPLVTTCGHVFCSQCLVHWIAENGTCPLTCEQL 98
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAK-----SYCPVCEMMINS 474
++ +E CP+C + + I+ CLH++C C+ + ++++ CP C ++
Sbjct: 649 IIRSAHESSCCPICSRPF-KSPKILPCLHTYCSDCVKEIVRSRLGKLTLQCPKCPRSVDI 707
Query: 475 AKP 483
P
Sbjct: 708 PDP 710
>SB_29534| Best HMM Match : cNMP_binding (HMM E-Value=7.8)
Length = 268
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +1
Query: 412 CIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQDIVYKLVPGL 540
C+I + A+++ + ++ +SA + DK L+DI+YKLVPGL
Sbjct: 68 CVIDN--ARNHSMIVFLLASSAL--YRSDKTLEDIIYKLVPGL 106
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQD 513
CP C Y ++ CLH+FC C+ + L CE +N P D L+D
Sbjct: 15 CPKCMNAY-ENPKVLPCLHTFCSQCLSEELHRD-----CEGRLNVTCPKCLRDFPLRD 66
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 289 AVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKH-LKAKSYCPVC 456
A VP +V + CP+C I C S+C CI + L+ + CP C
Sbjct: 42 ADVPAAKADRKVPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTC 98
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCI 417
E CP+C + I EC H FC+SC+
Sbjct: 22 EEYECPICQLAFRDPIQIEECGHRFCQSCL 51
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS-------YCPVCEMM--INSAKPN 486
+ C +C + ++ CLHSFC+SC I+ L K+ CPVC+ + I + +
Sbjct: 60 LICRVCNQRF-NKPKLLHCLHSFCQSC-IEGLARKTEDDCLELICPVCDSLGAIPRSVES 117
Query: 487 IKLDKALQDIVYK 525
+ + AL D V K
Sbjct: 118 LPTNFALWDTVRK 130
>SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028)
Length = 116
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 289 AVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKH-LKAKSYCPVC 456
A VP +V + CP+C I C S+C CI + L+ + CP C
Sbjct: 42 ADVPAAKADRKVPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTC 98
>SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 337 TCPLCXGYY--IXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQ 510
TC +C Y + ++C H F R CI L +S CPV + + + +
Sbjct: 211 TCGVCLSAYHPLQYVRKLQCRHVFHRDCIDSWLATQSICPVDGQTVGVSYMGVAHTEVAP 270
Query: 511 DIVYKLVPGLFQKEMERRQ 567
++ V G + + R+
Sbjct: 271 PVINSAVQGAARGRLLNRR 289
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 325 NEHITCPLCXGYYIXATTIVECLHSFCRSCIIK---HLKAKSYCPVC 456
+E +TCP+C + C H+ C+ C+ + + + + CP C
Sbjct: 12 SEELTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTC 58
>SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23)
Length = 203
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQDIVYKL 528
C+HSFC SC + ++ CP + A NI +D+ LQ + KL
Sbjct: 81 CMHSFCASCYSQWMEHSRDCPSNYL----AGKNIGVDELLQKCLEKL 123
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSC---IIKHLKAKSYCPVCEMMIN 471
CP+C + +I C H FC C +I++ CP+C +N
Sbjct: 65 CPICLDP-LDDPSITRCAHVFCTGCLTDVIENEGLAPRCPMCRAPVN 110
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 31.1 bits (67), Expect = 0.81
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKH--LKAKS---YCPVC-------EMMIN 471
+ + C C + I++CLH+FC+ C+ H L A + CP+C E +
Sbjct: 12 QSLNCRACHKVF-TEPKILDCLHTFCQKCLGTHDILGAGTNSIVCPLCRKPTPIPESGVE 70
Query: 472 SAKPNIKLDKALQDIVYK 525
S N L+ AL + K
Sbjct: 71 SLPSNFLLNNALDQLSVK 88
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQDI 516
CPLC + I C H+FC++CI+ + CP+ + ++ N+ + + + ++
Sbjct: 194 CPLCRRVF-KDPVITSCGHTFCQACIM--ARGVEKCPLDDNKLSIVVANLAVAEQIGEL 249
>SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14)
Length = 1071
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK 423
LL + + ITCP C + ++ CL S CRSC K
Sbjct: 109 LLENLTKFITCPSCKET-MNDPVLLPCLDSICRSCCQK 145
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 229 MVTSNIISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCR 408
MV+ ++ + VV+ S+ + L+ +TCP C A + +C H FC
Sbjct: 318 MVSIVYMTPRSVVRA-RSHFRLASDHNLVLFHQARLTCPCCNTRKKDAI-LTKCFHVFCY 375
Query: 409 SCI-IKHLKAKSYCPVCEMMINS 474
C+ ++ + CP C S
Sbjct: 376 ECLKTRYDTRQRKCPKCNATFGS 398
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +1
Query: 379 IVECLHSFCRSCIIK---HLKAKSYCPVCE 459
++EC H++C SCIIK K + CP C+
Sbjct: 407 LLECGHTYCDSCIIKLSRLQKTQVACPECQ 436
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKA---KSYCPVCEMMINS 474
+ + C +C + C H FC CI + L KS CPVC+ I+S
Sbjct: 156 DFVFCAICKEV-LTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASISS 206
>SB_48473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 20
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 496 DKALQDIVYKLVPGLF 543
D LQDIVYK+VPG++
Sbjct: 3 DNVLQDIVYKVVPGMY 18
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
CP C + C H +CR C+ ++AK + C
Sbjct: 1951 CPACFCEVDNPYQLATCGHVYCRGCVTNLIEAKQFPLTC 1989
>SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)
Length = 379
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK 423
+ + ITCP C + ++ CL S CRSC K
Sbjct: 21 LTKFITCPSCKET-MNGPVLLPCLDSICRSCCQK 53
>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
Length = 605
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIK 423
+ + ITCP C + ++ CL S CRSC K
Sbjct: 21 LTKFITCPSCKET-MNGPVLLPCLDSICRSCCQK 53
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
+ G+ + C +C + + C HS C SC + + K CP C A +
Sbjct: 46 ITGDAPDDFICNVCGTVMLVPVVMPNCGHSCCSSC-AERVNRK--CPECREEF-GATAEL 101
Query: 490 KLDKALQDIVYKL 528
K + +L+ I+ +L
Sbjct: 102 KENISLKRIIRRL 114
>SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 349
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
+ G+ + C +C + + C HS C SC + + K CP C A +
Sbjct: 46 ITGDAPDDFICNVCGTVMLVPVVMPNCGHSCCSSC-AERVNRK--CPECREEF-GATAEL 101
Query: 490 KLDKALQDIVYKL 528
K + +L+ I+ +L
Sbjct: 102 KENISLKRIIRRL 114
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 307 TLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCI 417
TLL + E C LC + I+ C H +C+ C+
Sbjct: 3 TLLPYLREKCKCSLCSEV-LTEPKILRCFHVYCQKCL 38
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/53 (26%), Positives = 18/53 (33%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
V C C Y+ + C H C C K K CP+C + K
Sbjct: 12 VPSEFLCSYCRKVYLHPL-VTGCGHVLCTKCYNKRSKKHLGCPLCGKSMGEGK 63
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 517 LCPAVLCQV*YWVLPNLSSFHIQDSSSLL*GV**YNYDKRNASIPLLWSHXCST 356
+ A++C + ++P ++ H D S + + N ++ +A I +WSH CST
Sbjct: 1513 IATAMVCYIPIHLMPMINIIHRSDMSIMCAQI--ANQEREDA-ITAMWSHKCST 1563
>SB_33424| Best HMM Match : zf-B_box (HMM E-Value=2.2e-18)
Length = 270
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 247 ISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKH 426
+S KV M NS ++V+P T + + C +C EC H C CI H
Sbjct: 6 VSSLKVNFMINSIISVLPLFTS-EDSKKKTVCQMCDSGEPAQGRCNECDHFVCEQCISAH 64
>SB_18516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 247 ISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKH 426
+S KV M NS ++V+P T + + C +C EC H C CI H
Sbjct: 85 VSSLKVNFMINSIISVLPLLTS-EDSKKKTVCQMCDSGDPAQGRCNECDHFVCEQCISAH 143
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIV-ECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+ C +C G + +T +V +C FC CI L+ C C ++
Sbjct: 330 LVCSICMG--VPSTPVVTQCDQIFCSGCITAWLRNAGACSSCRSVL 373
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
IV C H F + C+ L + CP+C + I
Sbjct: 229 IVPCRHEFHKECVDPWLLSNFTCPLCMLNI 258
>SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
C LC CLHSF + C + + + CP+C
Sbjct: 74 CNLCSRPLDLPAVHFLCLHSFHQPCFEGYAENDNECPIC 112
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/42 (26%), Positives = 15/42 (35%)
Frame = +1
Query: 343 PLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
P C + C H FC CI + CP+C +
Sbjct: 484 PTCQVKLAKQIMLRTCKHIFCEDCISLWFDREQTCPMCRARV 525
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 CPLCXGYYIX--ATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQD 513
C +C G + T ++ C HSFC C +LK++ + + P D L +
Sbjct: 312 CGICFGDFRENKMTALMSCGHSFCTECWEFYLKSQ----ISRGEGDIGCPGYNCDVTLDN 367
Query: 514 I-VYKLVPGLFQKEMERR 564
+ + L P + K ++R+
Sbjct: 368 VTIMSLTPSWYPKFLKRK 385
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,117,128
Number of Sequences: 59808
Number of extensions: 389299
Number of successful extensions: 938
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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