Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P23
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 60 9e-10
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 56 2e-08
At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger) fa... 55 5e-08
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 54 6e-08
At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger) fa... 52 4e-07
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 50 1e-06
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 49 2e-06
At2g34000.1 68415.m04163 zinc finger protein-related contains we... 44 9e-05
At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger) fa... 44 1e-04
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At5g47430.1 68418.m05844 expressed protein 40 0.002
At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger) fa... 39 0.003
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 39 0.003
At4g17410.1 68417.m02607 expressed protein 39 0.003
At2g25410.1 68415.m03043 hypothetical protein 39 0.003
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa... 38 0.004
At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) fa... 38 0.006
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18 pr... 37 0.010
At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger) fa... 37 0.010
At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger) fa... 36 0.023
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 36 0.023
At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger) fa... 36 0.023
At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 36 0.031
At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger) fa... 35 0.041
At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger) fa... 35 0.054
At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger) fa... 35 0.054
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 35 0.054
At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger) fa... 35 0.054
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 35 0.054
At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) fa... 35 0.054
At5g60820.1 68418.m07630 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 34 0.071
At1g35630.1 68414.m04427 protease-associated zinc finger (C3HC4-... 34 0.071
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 34 0.094
At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger) fa... 34 0.094
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 34 0.094
At3g05670.1 68416.m00631 PHD finger family protein contains Pfam... 34 0.094
At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger) fa... 34 0.094
At1g74620.1 68414.m08642 zinc finger (C3HC4-type RING finger) fa... 34 0.094
At5g63750.1 68418.m08001 IBR domain-containing protein contains ... 33 0.12
At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger) fa... 33 0.16
At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger) fa... 33 0.16
At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger) fa... 33 0.16
At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger) fa... 33 0.16
At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger) fa... 33 0.16
At1g35625.1 68414.m04426 protease-associated zinc finger (C3HC4-... 33 0.16
At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger) fa... 33 0.16
At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At4g00335.2 68417.m00044 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At4g00335.1 68417.m00043 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membr... 33 0.22
At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 33 0.22
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At5g22000.3 68418.m02560 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At5g22000.2 68418.m02559 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At5g22000.1 68418.m02558 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 32 0.29
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger) fa... 32 0.38
At5g22750.1 68418.m02657 SNF2 domain-containing protein / helica... 31 0.50
At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At4g26580.1 68417.m03832 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 31 0.50
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 31 0.50
At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING ... 31 0.50
At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 31 0.66
At5g08139.1 68418.m00949 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At5g06420.2 68418.m00719 zinc finger (CCCH-type/C3HC4-type RING ... 31 0.66
At5g06420.1 68418.m00718 zinc finger (CCCH-type/C3HC4-type RING ... 31 0.66
At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At3g19910.1 68416.m02521 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger) fa... 31 0.66
At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 31 0.88
At5g37200.1 68418.m04466 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At4g09560.1 68417.m01571 protease-associated zinc finger (C3HC4-... 30 1.2
At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At3g45570.1 68416.m04922 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At3g42180.2 68416.m04334 exostosin family protein contains Pfam ... 30 1.2
At3g42180.1 68416.m04335 exostosin family protein contains Pfam ... 30 1.2
At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-rela... 30 1.5
At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At4g10940.1 68417.m01779 PHD finger family protein contains Pfam... 30 1.5
At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g77830.1 68414.m09068 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At1g09520.1 68414.m01067 expressed protein 30 1.5
At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At5g15820.1 68418.m01851 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At1g74760.1 68414.m08662 zinc finger (C3HC4-type RING finger) fa... 29 2.0
At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At3g25030.1 68416.m03128 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At1g61620.1 68414.m06943 expressed protein contains Pfam profile... 29 2.7
At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At1g17145.1 68414.m02090 expressed protein 29 2.7
At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc ... 29 3.5
At5g55970.2 68418.m06981 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At5g55970.1 68418.m06980 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At1g78420.1 68414.m09138 expressed protein 29 3.5
At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At1g26800.1 68414.m03266 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 29 3.5
At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At5g41150.1 68418.m05002 repair endonuclease (RAD1) (UVH1) conta... 28 4.7
At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 28 4.7
At3g08720.2 68416.m01014 serine/threonine protein kinase (PK19) ... 28 4.7
At3g08720.1 68416.m01013 serine/threonine protein kinase (PK19) ... 28 4.7
At2g39420.1 68415.m04839 esterase/lipase/thioesterase family pro... 28 4.7
At2g34780.1 68415.m04270 expressed protein 28 4.7
At2g22010.1 68415.m02614 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At1g05055.1 68414.m00506 basic transcription factor 2, 44kD subu... 28 4.7
At5g37560.1 68418.m04523 zinc finger protein-related contains we... 28 6.2
At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At3g14970.1 68416.m01893 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At3g13228.1 68416.m01663 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At1g55700.1 68414.m06378 DC1 domain-containing protein contains ... 28 6.2
At1g18770.1 68414.m02340 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At5g53910.1 68418.m06708 (S)-2-hydroxy-acid oxidase, peroxisomal... 27 8.2
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At3g08730.1 68416.m01015 serine/threonine protein kinase (PK1) (... 27 8.2
At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At2g39410.2 68415.m04837 hydrolase, alpha/beta fold family prote... 27 8.2
At2g39410.1 68415.m04836 hydrolase, alpha/beta fold family prote... 27 8.2
At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) fa... 27 8.2
At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger) fa... 27 8.2
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 60.5 bits (140), Expect = 9e-10
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +1
Query: 271 MDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSY-- 444
M+ VA V + T++ +TCPLC ATTI ECLH+FCR CI + +
Sbjct: 1 MEGDMVAKVKRETVVA----CMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIES 56
Query: 445 CPVCEMMINSAK-PNIKLDKALQDIVYKLVPGLFQKE 552
CPVC++ + ++ D LQD+ KL P +KE
Sbjct: 57 CPVCDIDLGGTPLEKLRPDHILQDLRAKLFPLKRKKE 93
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLK-AKSYCPVC 456
LGE+ + + CP+C G T++ECLH FCR CI K ++ + CP C
Sbjct: 127 LGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 175
>At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 480
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 304 RTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCI-IKHLKAK-SYCPVCEMMIN-S 474
+ L EV + CP+C + ATTI ECLH+FCRSCI K + + + CPVC + +
Sbjct: 4 KVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVF 63
Query: 475 AKPNIKLDKALQDIVYKLVPGLFQ 546
++ D QD+ K+ + +
Sbjct: 64 PLEKLRSDCTWQDLKLKIYRAMME 87
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI--NSAKPNIK 492
++++ + CP+C I + C HSFC CII HL+ KS CP C + N PN
Sbjct: 45 DLDKDLLCPICM-QIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFL 103
Query: 493 LDKALQ 510
LDK L+
Sbjct: 104 LDKLLK 109
>At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger)
family protein
Length = 421
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSY--CPVCEMMINSAK-PNIKLDKA 504
++C +C ATTI ECLH+FCR CI + + CPVC + + S ++ D
Sbjct: 14 LSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTPLEKLRPDHN 73
Query: 505 LQDIVYKL 528
LQD+ K+
Sbjct: 74 LQDLRAKI 81
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +1
Query: 247 ISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKH 426
+ ++++V D S + + + L + + CP+C Y A ++ C H FC +CI+K
Sbjct: 321 VYNREIVVRDRSR-SKMADTSHLERMGRELKCPICLSLYNSAVSL-SCNHVFCNACIVKS 378
Query: 427 LKAKSYCPVCEM 462
+K + CPVC++
Sbjct: 379 MKMDATCPVCKI 390
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLK-AKSYCPVCEMMINSAKPNI 489
L ++ + + C +C G T++ECLH FCR CI K ++ + CP C S + ++
Sbjct: 94 LADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRR-SL 152
Query: 490 KLD---KALQDIVYKLVPGLFQKEMERRQHFYA-SRPXQAATA 606
+ D AL ++K + ++E+ RQ A ++ QA+ A
Sbjct: 153 RDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIA 195
>At2g34000.1 68415.m04163 zinc finger protein-related contains weak
hit to Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 151
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 325 NEHITCPLCXGYY---IXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKL 495
N+ I CP+C G + + C+H F CI K L++ + CPVC + N
Sbjct: 86 NQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLESHATCPVCRRLAEPMTSN--G 143
Query: 496 DKALQDIV 519
DK L+ IV
Sbjct: 144 DKVLERIV 151
>At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger) domain
Length = 359
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 241 NIISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTI--VECLHSFCRSC 414
NI K+V + + + + +RTLL E + C +C Y + + C H F +C
Sbjct: 277 NITGPGKMVPIPINGLCLATERTLLAEDAD---CCICLSSYEDGAELHALPCNHHFHSTC 333
Query: 415 IIKHLKAKSYCPVCEMMI 468
I+K LK ++ CP+C+ I
Sbjct: 334 IVKWLKMRATCPLCKYNI 351
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGY-YIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
+ E ++ C +C Y ATT C H+FCRSC+ + + + CP+C +I
Sbjct: 187 MAERSDDFDCTVCLKLLYEPATT--PCGHTFCRSCLFQSMDRGNKCPLCRTVIFMTPRTC 244
Query: 490 KLDKALQDIVYKLVP 534
+ L +I+ K P
Sbjct: 245 AVSVTLNNIIEKNFP 259
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGY-YIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
+ E ++ C +C Y ATT C H+FCRSC+ + + + CP+C +I
Sbjct: 187 MAERSDDFDCTVCLKLLYEPATT--PCGHTFCRSCLFQSMDRGNKCPLCRTVIFMTPRTC 244
Query: 490 KLDKALQDIVYKLVP 534
+ L +I+ K P
Sbjct: 245 AVSVTLNNIIEKNFP 259
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGY-YIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
+ E ++ C +C Y ATT C H+FCRSC+ + + + CP+C +I
Sbjct: 187 MAERSDDFDCTVCLKLLYEPATT--PCGHTFCRSCLFQSMDRGNKCPLCRTVIFMTPRTC 244
Query: 490 KLDKALQDIVYKLVP 534
+ L +I+ K P
Sbjct: 245 AVSVTLNNIIEKNFP 259
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGY-YIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
+ E ++ C +C Y ATT C H+FCRSC+ + + + CP+C +I
Sbjct: 187 MAERSDDFDCTVCLKLLYEPATT--PCGHTFCRSCLFQSMDRGNKCPLCRTVIFMTPRTC 244
Query: 490 KLDKALQDIVYKLVP 534
+ L +I+ K P
Sbjct: 245 AVSVTLNNIIEKNFP 259
>At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 713
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 280 SNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCE 459
+N+ + P L ++ + CPLC + ++ C H FC SC+ K + +S CPVC+
Sbjct: 5 TNMLMNPWVLHLQKLELELKCPLCLKL-LNRPVLLPCDHVFCDSCVHKSSQVESGCPVCK 63
>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 714
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 280 SNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCE 459
+N+ + P L ++ + CPLC + ++ C H FC SC+ K + +S CPVC+
Sbjct: 5 TNMLMNPWVLHLQKLELELKCPLCLKL-LNRPVLLPCDHVFCDSCVHKSSQVESGCPVCK 63
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVECLH-SFCRSCIIKHLKAKSYCPVC---EMMINSAK 480
+GE+ + CPLC A +C + SFC CI H+ +KS C VC +++ +
Sbjct: 286 VGELPPELKCPLCKEVMKDAALTSKCCYKSFCDKCIRDHIISKSMC-VCGRSDVLADDLL 344
Query: 481 PNIKLDKALQDIVYKLV 531
PN K L+D + +++
Sbjct: 345 PN----KTLRDTINRIL 357
>At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger)
family protein very low similarity to RING-H2 finger
protein RHG1a [Arabidopsis thaliana] GI:3822225;
contains Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 343
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 259 KVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLK 432
K++ +D ++ + +R LL E + C +C Y +V C H F +CI+K LK
Sbjct: 268 KMIPVDAASENLGNERVLLPEDAD---CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLK 324
Query: 433 AKSYCPVCEMMI 468
+ CP+C+ I
Sbjct: 325 MNATCPLCKFNI 336
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHL-KAKSYCPVC 456
E CP+C I C H FCR+CI++ L ++K CP+C
Sbjct: 612 EDFDCPICISPPTNII-ITRCAHIFCRACILQTLQRSKPLCPLC 654
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 313 LGEVNEHITCPLCXGYYIXATTIVEC-LHSFCRSCIIKHLKAKSYCPVC---EMMINSAK 480
+GE + CPLC A +C L S+C CI H+ AKS C VC ++ +
Sbjct: 197 VGEFPPELKCPLCKEVMRDAALASKCCLKSYCDKCIRDHIIAKSMC-VCGATHVLADDLL 255
Query: 481 PNIKLDKALQDIVYKLV 531
PN K L+D + +++
Sbjct: 256 PN----KTLRDTINRIL 268
>At2g25410.1 68415.m03043 hypothetical protein
Length = 377
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVC 456
+ CP+C Y T+ EC H F CI LK S CPVC
Sbjct: 325 VVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVC 368
>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 336
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVC 456
I CP+C Y T+ EC H F CI + LK S CPVC
Sbjct: 288 IICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVC 331
>At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 334 ITCPLCXGYYIXATT---IVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
I CP+C Y+ T I EC H F CI LK CP+C NS P
Sbjct: 613 IVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCR---NSRSP 662
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 334 ITCPLCXGYYIXATT---IVECLHSFCRSCIIKHLKAKSYCPVC 456
I CP+C Y T I EC H F CI LK CP+C
Sbjct: 830 IVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLC 873
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 325 NEHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
++ I C +C Y+ + + C H + SC+ + L+ K++CP+C+ K
Sbjct: 470 DDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEK 523
>At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 238
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 304 RTLLGEVNEHITCPLCXGYYIXATTIV--ECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+ L GE ++ C +C + T++ C H F CI+ LK K CPVC +I
Sbjct: 133 QNLSGEEDDK-RCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVI 188
>At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18
protein, Homo sapiens, PIR:JN0717
Length = 405
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +1
Query: 274 DNSNVAVVPQRTLLGEVNEHI-----TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAK 438
D+++ A VP + G ++ +C LC ++ V C H FC+ C+ +
Sbjct: 81 DSTDSATVPAKCPFGYDSQTFKLGPFSCMLCQALLYESSRCVPCTHVFCKVCLTRF---- 136
Query: 439 SYCPVCEMMINSAKPNIKLDKALQDIVYKLVPG 537
CP+C I S I++D+ LQ +V + + G
Sbjct: 137 KDCPLCGADIES----IEVDENLQKMVDQFIEG 165
>At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS------YCPVCEMMINSAKPNI 489
EH C +C + T CLH+FC C + ++ CP C + N
Sbjct: 134 EHAKCSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLCPQCRTTVQYVGKNH 193
Query: 490 KLDKALQDIVYKL 528
L K +Q+ + K+
Sbjct: 194 FL-KNIQEEILKV 205
>At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 691
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMM-INSAK 480
C +C Y + +EC H F CI + LK K+ CP+C+ +N+AK
Sbjct: 637 CCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKTTGLNTAK 686
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 253 DKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHL- 429
++K + D +++ + ++ + ++C +C +T C HSFC+ C+
Sbjct: 695 EEKKIDKDEKSLSDHVVLPCIDKLRDELSCAICLEICFEPSTTT-CGHSFCKKCLRSAAD 753
Query: 430 KAKSYCPVCEMMINSAKPNIKLDKALQDIVYKLVPGLFQKEMERRQ 567
K CP C +I + + + +++ + LF KE+E ++
Sbjct: 754 KCGRKCPKCRQLIGNGR-----YCTVNTVLWNTIQLLFPKEVEAQR 794
>At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 278
Score = 35.9 bits (79), Expect = 0.023
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS 441
CP+C G ++ + + C H FC +CI + +K S
Sbjct: 22 CPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVS 55
>At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKL 495
TCP+C + + +C H FC+ CI + + CP C + +AK I++
Sbjct: 147 TCPICMCPFTEEMS-TKCGHIFCKGCIKMAISRQGKCPTCRKKV-TAKELIRV 197
>At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKL 495
TCP+C + + +C H FC+ CI + + CP C + +AK I++
Sbjct: 147 TCPICMCPFTEEMS-TKCGHIFCKGCIKMAISRQGKCPTCRKKV-TAKELIRV 197
>At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKL 495
TCP+C + + +C H FC+ CI + + CP C + +AK I++
Sbjct: 147 TCPICMCPFTEEMS-TKCGHIFCKGCIKMAISRQGKCPTCRKKV-TAKELIRV 197
>At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 212
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVC--EMMINS 474
+ E CP+C Y + +C H F +CI++ ++ CPVC EM+ +S
Sbjct: 155 IEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMVFDS 209
>At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b, Arabidopsis thaliana, PIR:T41745 [gi:3790575];
contains Pfam domain zinc finger, C3HC4 type (RING
finger) PF00097
Length = 208
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 307 TLLGEVNEHITCPLCXGYYIXA-----TTIVECLHSFCRSCIIKHLKAKSYCPVC 456
T LG+ E TC +C + + + +C H F +SCI K LK + CP+C
Sbjct: 143 TNLGD-EEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLC 196
>At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 520
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 325 NEHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
++ + C +C Y+ + + C H + SC + L+ K++CP+C+ S
Sbjct: 463 DDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSAES 514
>At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 520
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 325 NEHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
++ + C +C Y+ + + C H + SC + L+ K++CP+C+ S
Sbjct: 463 DDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSAES 514
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+CP+C + + +C H FC+ CI L ++ CP C I
Sbjct: 126 SCPICLCPFTQEVS-TKCGHIFCKKCIKNALSLQAKCPTCRKKI 168
>At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVC 456
CP C YI + +C H F SCI + ++ CPVC
Sbjct: 182 CPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVC 222
>At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVC 456
CP C YI + +C H F SCI + ++ CPVC
Sbjct: 182 CPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVC 222
>At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 493
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 304 RTLLGE--VNEHITCPLCXGYYIXA--TTIVECLHSFCRSCIIKHLKAKSYCPVC 456
R ++ E V + + C +C + TT + CLH + CI+ L A++ CP+C
Sbjct: 336 RVIIAEEHVMKGLVCAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLC 390
>At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 273
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMMINSA-KPNIKLD 498
+ +TC +C + + CLH F CI L+ + CPVC+ +S + ++D
Sbjct: 207 DELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRAHSGWQEQDEID 266
Query: 499 KALQDIV 519
D+V
Sbjct: 267 DDASDMV 273
>At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 296
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 337 TCPLCXGYYIX---ATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
+CP+C A I C H +C +CI K K CP+C +S
Sbjct: 38 SCPICLENLTERRSAAVITVCKHGYCLACIRKWSSFKRNCPLCNTRFDS 86
>At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 254
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 340 CPLCXGYY-IXATTIVE-CLHSFCRSCIIK--HLKAKSYCPVCEMMINSAKPNIKLDKAL 507
C +C + T +V+ C H++C +CI++ K K CP C++ + + LD ++
Sbjct: 43 CAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCPQCKLPFDFLNVHRALDGSV 102
Query: 508 QDIVYK 525
+D +++
Sbjct: 103 EDFMFE 108
>At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger proteins
RHG1a [Arabidopsis thaliana] GI:3822225, RHY1a
[Arabidopsis thaliana] GI:3790593; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 202
Score = 34.7 bits (76), Expect = 0.054
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 337 TCPLCXGYYIXAT----TIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+C +C + ++ T + C H F SC+++ LK K+ CP+C ++
Sbjct: 152 SCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMCRTVL 199
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 34.7 bits (76), Expect = 0.054
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +1
Query: 337 TCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVC--EMMINSAKPNIKL 495
+C +C Y I ++C+H + C+ K L K+ CP+C E ++ K ++L
Sbjct: 427 SCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEALVIEKKKKLRL 483
>At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 360
Score = 34.7 bits (76), Expect = 0.054
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
++C +C I + C H+FC+ C + + K +CPVC +
Sbjct: 310 LSCCVCM-VKIKGASFTPCGHTFCKLCSKELMAQKGHCPVCSSFV 353
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 34.7 bits (76), Expect = 0.054
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIKHL------KAKSYCPVCEMMINSAKPNIKL 495
++C +C + + I+ C H FC SCI K + K+ CP+C+ +
Sbjct: 298 VSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSERKKTTCPLCKSNFITITKIEDA 357
Query: 496 DKALQDIVYKLVPGL 540
D + Q I + VP L
Sbjct: 358 DSSDQKIYSQTVPDL 372
>At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 351
Score = 34.7 bits (76), Expect = 0.054
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
++ E + C +C + T ++ C H F C++ L+ S CPVC +
Sbjct: 216 KIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQL 267
>At5g60820.1 68418.m07630 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 419
Score = 34.3 bits (75), Expect = 0.071
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 277 NSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCP 450
N V+ + ++ ++ + C +C I + E C H + CI+ L ++ CP
Sbjct: 351 NLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCP 410
Query: 451 VCEMMINS 474
VC + S
Sbjct: 411 VCRFELPS 418
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 34.3 bits (75), Expect = 0.071
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
++ E + C +C + T E C H F CI+ L+ S CPVC + S+
Sbjct: 252 KIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSS 306
>At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA1b [Arabidopsis thaliana] GI:3790567; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 216
Score = 34.3 bits (75), Expect = 0.071
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
E ++ L Y+ + +CLHSF + CI K + ++ CP+C
Sbjct: 164 EKLSDSLSETYHNSIIQMPKCLHSFHQKCIFKWIGRQNSCPLC 206
>At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 497
Score = 34.3 bits (75), Expect = 0.071
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCE 459
E C +C Y + + C H++ C+ + L+ KS+CP+C+
Sbjct: 444 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICK 489
>At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 34.3 bits (75), Expect = 0.071
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 382 VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDK 501
++CLH + SCI+ L + CP+C +N +D+
Sbjct: 154 LKCLHLYHSSCIVSWLNIHNTCPICRFEVNLGVSESNVDE 193
>At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 645
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 340 CPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMM-INSA-KP 483
C +C Y I +EC H F CI + LK K+ CP+C+ +N+A KP
Sbjct: 592 CCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICKTTGLNTANKP 643
>At1g35630.1 68414.m04427 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 318
Score = 34.3 bits (75), Expect = 0.071
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATT--IVECLHSFCRSCIIKHL-KAKSYCPVCE 459
+L E + +TC +C Y I+ C H + CI L + +S+CPVC+
Sbjct: 223 VLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCK 275
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 256 KKVVKMDNSNVAVVPQRTLLGEVNEHIT--CPLCXGYYIXATTIVECLHSFCRSCIIKHL 429
++V KM N + +++ LGE + I CP+C ++ C H FC++C+++
Sbjct: 1537 QEVQKMVNE---LAREKSALGEKPDEIEVECPICLSEVDDGYSLEGCSHLFCKACLLEQF 1593
Query: 430 KA 435
+A
Sbjct: 1594 EA 1595
>At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING finger protein 38
[Homo sapiens] GI:21666412; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
E C +C Y + E C H F + C+ K LK + CP+C+ + ++
Sbjct: 359 EDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDL 414
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 256 KKVVKMDNSNVAVVPQRTLLGEVNEHIT--CPLCXGYYIXATTIVECLHSFCRSCIIKHL 429
++V KM N + +++ LGE + I CP+C ++ C H FC++C+++
Sbjct: 1534 QEVQKMVNE---LAREKSALGEKPDEIELECPICLSEVDDGYSLEGCSHLFCKACLLEQF 1590
Query: 430 KA 435
+A
Sbjct: 1591 EA 1592
>At3g05670.1 68416.m00631 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 883
Score = 33.9 bits (74), Expect = 0.094
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMINS-AKP 483
C H FC +CI++ K +S CP+C+ + +KP
Sbjct: 432 CSHYFCFTCIMEWSKVESRCPLCKQRFRTISKP 464
>At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 196
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
V E C +C + T+V C H F C++ L YCP C
Sbjct: 144 VREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYC 190
>At1g74620.1 68414.m08642 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 249
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
C +C YI ++IV C H F CI K L+ CP+C I
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>At5g63750.1 68418.m08001 IBR domain-containing protein contains a
Prosite:PS00518 Zinc finger, C3HC4 type (RING finger),
signature and Pfam:PF01485 IBR domain
Length = 536
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 199 LRWNSDAV*KMVTSNIISDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCX-GYYIXAT 375
LRW+S V + + N ++K + + V V P + L + I C G Y+ +T
Sbjct: 46 LRWDSHEVSEFLVEN--NEKVLSESGLKPVVVDPNQDLYKISSCGICFKTCDDGDYLIST 103
Query: 376 TIVECLHSFCRSCIIKHLKAKSY 444
C H FC+SC K+L+ Y
Sbjct: 104 PF--CSHMFCKSCWRKYLEKNFY 124
>At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVC 456
CP C Y I +C H F SCI + ++ CPVC
Sbjct: 169 CPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVC 209
>At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger)
family protein ow similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA1a [gi:3790554]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 208
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 307 TLLGEVNEHITCPLCXGYYIXA-----TTIVECLHSFCRSCIIKHLKAKSYCPVC 456
T LG+ E TC +C + + + +C H F +SCI + LK + CP+C
Sbjct: 143 TDLGD-EEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLC 196
>At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 33.5 bits (73), Expect = 0.12
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
C +C + ++ C H FC C+ + + + CP+C ++ A
Sbjct: 365 CAICQEK-MHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPA 409
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
+++E + C +C + + E C H F CI+ L+ S CPVC
Sbjct: 234 KISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVC 281
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
+++E + C +C + + E C H F CI+ L+ S CPVC
Sbjct: 234 KISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVC 281
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 319 EVNEHIT-CPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCE 459
E++++I C +C Y+ + ++C H F + CI + + K+ CP+C+
Sbjct: 648 ELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 319 EVNEHIT-CPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCE 459
E++++I C +C Y+ + ++C H F + CI + + K+ CP+C+
Sbjct: 648 ELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 407
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKL 495
+ C +C + T E C H F CI+ L ++ CPVC + S +PN +
Sbjct: 193 IGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPS-EPNRRS 251
Query: 496 DKALQD 513
+ +D
Sbjct: 252 NNNEED 257
>At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKA 504
+ C +C ++ T+ C H+F +CI L ++S CP C + S KP
Sbjct: 121 VECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANL-SLKPGESYPYP 179
Query: 505 LQDI 516
+ D+
Sbjct: 180 ITDL 183
>At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVC 456
CP C Y + +C H F SCI + ++ CPVC
Sbjct: 181 CPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVC 221
>At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVC 456
CP C Y + +C H F SCI + ++ CPVC
Sbjct: 181 CPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVC 221
>At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 283 NVAVVPQRTLLGEVNEHITCPLCXGYYIXA--TTIVECLHSFCRSCIIKHLKAKSYCPVC 456
+V + PQ N+ C +C +I T + C H + + CI+ L+ + CP+C
Sbjct: 209 SVKITPQHL----TNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPIC 264
>At1g35625.1 68414.m04426 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 279
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATT--IVECLHSFCRSCIIKHL-KAKSYCPVCE 459
+L E + +TC +C Y I+ C H + CI L + +S+CPVC+
Sbjct: 184 VLEEGSTSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCK 236
>At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATT---IVECLHSFCRSCIIKHLKAKSYCPVC 456
E + CP+C + T I +C H F CI L++++ CP+C
Sbjct: 114 EALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLC 159
>At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 226
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
+ CP+C + ++ C H F R CI+ LK CP+C
Sbjct: 172 LDCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPIC 214
>At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA3a [gi:3790573]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 192
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = +1
Query: 232 VTSNIISDKKVVKMDNSNVAVVPQRTL----LGEVNEHITCPLCXGYYIXA-----TTIV 384
VT +++ V+ ++ ++ ++T+ LG+ E TC +C + + +
Sbjct: 98 VTRDVMFSSIAVRSTDTFQRLLEEQTMELTDLGD-EEETTCSICLEDFSESHDDNIILLP 156
Query: 385 ECLHSFCRSCIIKHLKAKSYCPVC 456
+C H F ++CI + LK + CP+C
Sbjct: 157 DCFHLFHQNCIFEWLKRQRSCPLC 180
>At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
+ C +C ++ + C H FC C +KH C VC
Sbjct: 84 LACSICQNPFLDPV-VTNCNHYFCDKCALKHHTENDTCFVC 123
>At4g00335.2 68417.m00044 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 190
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVCE 459
E CP+C Y +C H F SC+++ ++ CP+C+
Sbjct: 135 EEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICD 180
>At4g00335.1 68417.m00043 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 190
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVCE 459
E CP+C Y +C H F SC+++ ++ CP+C+
Sbjct: 135 EEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICD 180
>At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 772
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIKHL-------KAKSY--CPVCEMMIN 471
+ CP+C Y + I C H FC CI+++L K + CP+C +MI+
Sbjct: 243 VQCPICLEYPL-CPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMIS 296
>At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membrane
protein (PEX10) identical to zinc-binding peroxisomal
integral membrane protein GI:4337011 from [Arabidopsis
thaliana]
Length = 381
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
C LC T C H FC SCI++ K CP+C
Sbjct: 327 CTLCLSTRQHPTA-TPCGHVFCWSCIMEWCNEKQECPLC 364
>At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +1
Query: 388 CLHSFCRSCIIK--HLKAKSY-CPVCEMMINSAK--PNIKLDKALQDIVYKLVPGL 540
C H FC C+ K HL ++S CPVC+ +I + P K+ D K +PGL
Sbjct: 38 CGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVPLYGRGKSSADPRSKSIPGL 93
>At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9NVW2 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Homo sapiens}; contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+ E C +C Y T + E C H F SC+ K L + CP+C+ I
Sbjct: 307 LQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 357
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 295 VPQRTLLGEVNEHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+P+ T+ + N TC +C TI + CLH F + CI L CPVC+ +
Sbjct: 575 LPESTVQTD-NFQETCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCKSSV 633
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 YIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMIN-SAKPNIK 492
+I + C H F + CI + L++ CPVC ++ +A NIK
Sbjct: 125 HILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAPENIK 169
>At5g22000.3 68418.m02560 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 340 CPLCXGYYIXA--TTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
C +C + + +T+ C H + CI++ + S CP+C I+ P
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDP 82
>At5g22000.2 68418.m02559 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 340 CPLCXGYYIXA--TTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
C +C + + +T+ C H + CI++ + S CP+C I+ P
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDP 82
>At5g22000.1 68418.m02558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 340 CPLCXGYYIXA--TTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
C +C + + +T+ C H + CI++ + S CP+C I+ P
Sbjct: 33 CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDP 82
>At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 255
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 340 CPLCXGYY-IXATTIVE-CLHSFCRSCIIKHLKAKS--YCPVCEMMINSAKPNIKLDKAL 507
C +C + T +V+ C H++C +CI++ K CP C+ + + LD ++
Sbjct: 46 CAICLSEIPLQETAMVKGCEHTYCVTCILRWASCKESPTCPQCKHPFDFLSVHRALDGSI 105
Query: 508 QDIVYK 525
+D +++
Sbjct: 106 EDFLFE 111
>At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 153
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVCE 459
CP+C Y + +C H F +CI+ ++ CPVC+
Sbjct: 104 CPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCD 145
>At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 213
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
C HSF + CI+ L+ K CP C I++ +
Sbjct: 176 CSHSFHKDCILPWLRCKRSCPTCRDDIHNRR 206
>At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 878
Score = 32.3 bits (70), Expect = 0.29
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +1
Query: 247 ISDKKVVKMDN---SNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCI 417
I+ KKV ++ + + A+ R L E E + C C I +C H FC C+
Sbjct: 792 IAKKKVSRLRSLIEGSSAIQKLRQELSEFKEILKCKACNDRP-KEVVITKCYHLFCNPCV 850
Query: 418 IKHLKAK-SYCPVCEMMI--NSAKP 483
K + CP C N KP
Sbjct: 851 QKLTGTRQKKCPTCSASFGPNDIKP 875
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVC 456
+ C +C + T+ C H+F SCI L ++S CPVC
Sbjct: 126 VECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVC 169
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQDIV 519
I EC H F C+ + L+ + CP+C NS P+ +L L D+V
Sbjct: 110 IPECNHCFHTDCVDEWLRTSATCPLCR---NSPAPS-RLATPLSDLV 152
>At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger)
family protein RING-H2 finger protein RHA1a, Arabidopsis
thaliana,AF078683
Length = 236
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQ 510
C +C G Y + + C H+F CI L + + CP+C + + KP++ L
Sbjct: 111 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL-IPKPSLDLSHQST 169
Query: 511 DIV 519
+IV
Sbjct: 170 EIV 172
>At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 206
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 376 TIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
T + C H F C+++ LK K+ CP+C I
Sbjct: 174 TRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger)
family protein low similarity to RNF6 protein [Mus
musculus] GI:20530241; contains Pfam profile PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 379
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
++E C +C Y + E C H F C+ K L+ + CP+C+ I
Sbjct: 317 LSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNI 367
>At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 271 MDNSNVAVVPQRTLLGEVNEH-ITCPLCXGYYIXATT---IVECLHSFCRSCIIKHLKAK 438
+D + + +P T E ++ I C +C + + T + C H+F CI +
Sbjct: 95 LDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSH 154
Query: 439 SYCPVCEMMINS 474
S CP+C ++ S
Sbjct: 155 STCPLCRSLVES 166
>At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 158
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 283 NVAVVPQRTLLGEVNEHITCPLCXGYYIXAT---TIVECLHSFCRSCIIKHLKAKSYCPV 453
++ VV R E E C +C G + + C H + C+ + LK +S CP+
Sbjct: 88 SLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPL 147
Query: 454 CEMMI 468
C + I
Sbjct: 148 CRVSI 152
>At5g22750.1 68418.m02657 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1029
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Frame = +1
Query: 295 VPQRTLLGEVNEHIT------CPLCXGYYIXATTIVECLHSFCRSCIIKHLK--AKSYCP 450
VP + EV E + CP+C A + C H CR C++ + CP
Sbjct: 773 VPSEAFVQEVVEELRKGEQGECPICLEALEDAV-LTPCAHRLCRECLLASWRNSTSGLCP 831
Query: 451 VCEMMIN 471
VC ++
Sbjct: 832 VCRNTVS 838
>At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 VVPQRTLLGEVNEHIT-CPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVCE 459
V+P + E+ T C +C G ++ T+ +C H F CI L + S CP C
Sbjct: 96 VIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155
Query: 460 MMI 468
+
Sbjct: 156 QSL 158
>At4g26580.1 68417.m03832 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 464
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 250 SDKKVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTI--VECLHSFCRSCIIK 423
SD ++ + + ++ + + + N C +C Y + + C H F C+ +
Sbjct: 388 SDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQ 447
Query: 424 HLKAKSYCPVCE 459
L+ S CP+C+
Sbjct: 448 WLRIISCCPLCK 459
>At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 71
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 376 TIVECLHSFCRSCIIKHLKAKSYCPVC 456
T + C H F C+++ LK K+ CP+C
Sbjct: 39 TRMTCSHVFHNGCLLEWLKRKNTCPLC 65
>At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger)
family protein zinc finger protein, Arabidopsis
thaliana, gb:L76926
Length = 225
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQ 510
C +C G Y + + C H+F CI L + + CP+C + + KP++ L
Sbjct: 97 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL-IPKPSVDLSHQSI 155
Query: 511 DIV 519
+IV
Sbjct: 156 EIV 158
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +1
Query: 337 TCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKAL 507
TC +C Y A + EC H F C+ LK CPVC + L L
Sbjct: 137 TCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPL 196
Query: 508 QDIV 519
++V
Sbjct: 197 SEVV 200
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1287
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS-YCPVC----EMMINSAKPNIKLDKA 504
C +C A V C H FC+ CI + L S +CP + I+S +LD A
Sbjct: 993 CGICNDAPEDAVASV-CGHVFCKQCIYERLTGDSNHCPFANCNVRLTISSLSSKTRLDDA 1051
Query: 505 LQDI 516
+ D+
Sbjct: 1052 MPDM 1055
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCE 459
C +C Y + E C HSF C+ + L K+ CPVC+
Sbjct: 320 CSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361
>At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein similar to SP|O15541 Zinc finger
protein 183 {Homo sapiens}; contains Pfam profiles
PF04396: Protein of unknown function, DUF537, PF00097:
Zinc finger, C3HC4 type (RING finger), PF00642: Zinc
finger C-x8-C-x5-C-x3-H type (and similar)
Length = 586
Score = 31.5 bits (68), Expect = 0.50
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
C +C ++ + +C H FC C +KH C VC
Sbjct: 277 CFICREPFVDPV-VTKCKHYFCEHCALKHHTKNKKCFVC 314
>At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTIV---ECLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
C +C + +I +C H F CI K L +S CP C I S
Sbjct: 107 CAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFS 154
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS--YCPVCEMMI 468
CP+C + C H CR C++ ++ S CP+C ++
Sbjct: 1040 CPICLES-ADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICRTIL 1083
>At5g08139.1 68418.m00949 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 376
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
+ C +C V+ C H + CI+ LK ++ CPVC
Sbjct: 307 LVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVC 349
>At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger)
family protein similar to SP:O54965 RING finger protein
13 {Mus musculus} RING zinc finger protein
Length = 234
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 340 CPLCXGYYIXAT--TIVECLHSFCRSCIIKHLKAKSYCPVCE 459
C +C Y+ TI+ C H + + CI L+ C VC+
Sbjct: 188 CMICHSDYVRGDKLTILPCTHKYHKDCISHWLQNSKLCCVCQ 229
>At5g06420.2 68418.m00719 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains Pfam domains PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar) and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 378
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
C +C ++ + +C H FC C +KH C VC
Sbjct: 312 CFICREPFLDPV-VTKCKHYFCEHCALKHHTKNKKCFVC 349
>At5g06420.1 68418.m00718 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains Pfam domains PF00642:
Zinc finger C-x8-C-x5-C-x3-H type (and similar) and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 378
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
C +C ++ + +C H FC C +KH C VC
Sbjct: 312 CFICREPFLDPV-VTKCKHYFCEHCALKHHTKNKKCFVC 349
>At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 214
Score = 31.1 bits (67), Expect = 0.66
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 256 KKVVKMDNSNVAVVPQR--TLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHL 429
+K+V D ++ TL G N+ + C +C G A + C H+FCR C +
Sbjct: 139 EKIVDDDGKETEILTASIGTLTG--NDSVCC-VCMGRKKGAA-FIPCGHTFCRVCSRELW 194
Query: 430 KAKSYCPVCEMMI 468
+ CP+C I
Sbjct: 195 LNRGSCPLCNRPI 207
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
C +C G + ++ +C H+F CI + LK+ S CP+C I
Sbjct: 1053 CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKI 1098
>At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 295 VPQRTLLGEVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
V + L E+N+ C +C + + + + C H F + C++ L+ + CPVC +
Sbjct: 204 VTKDMLKSEMNQ---CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260
Query: 469 NSAKPN 486
+ P+
Sbjct: 261 PTDDPD 266
>At3g19910.1 68416.m02521 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 340
Score = 31.1 bits (67), Expect = 0.66
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
++ C HS+ CI LK CPVC ++++
Sbjct: 303 LLPCKHSYHSECINNWLKINKVCPVCSAEVSTS 335
>At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger domain, C3HC4 type
(RING finger) 152633.
Length = 356
Score = 31.1 bits (67), Expect = 0.66
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +1
Query: 283 NVAVVPQRTLLGEVNEHITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPV 453
++ V R + G V E C +C + ++ +C H+F CI LK+ S CP+
Sbjct: 141 SITVYKYRKMDGFV-ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPL 199
Query: 454 CEMMINSAKPNIKLDKALQDIV 519
C I ++ +D Q IV
Sbjct: 200 CRAFIVTSSAVEIVDLTNQQIV 221
>At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 325
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 316 GEVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEM 462
G V E+ C +C + +IV C H F C+++ CP+C +
Sbjct: 269 GVVCENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCRL 319
>At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 164
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
E + I CP+C + I+ C H F R CI L CP C + + K
Sbjct: 103 EGSNKIFCPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLTCPNCRCSLTARK 159
>At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
+C H F + C+ + ++ KS CP+C I S
Sbjct: 166 DCCHVFHKLCLWRWIRTKSSCPLCRHPIYS 195
>At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 30.7 bits (66), Expect = 0.88
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +1
Query: 316 GEVNEHIT-CPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVC 456
GEV T C +C G + + C HSF SCI L + S CP C
Sbjct: 96 GEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNC 146
>At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9WTV7 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Mus musculus}; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 390
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
E C +C Y + E C H F +CI K L S CP+C+ I
Sbjct: 334 EDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382
>At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVC 456
C H+F +CI + L ++S CPVC
Sbjct: 139 CSHTFHANCIDEWLSSRSTCPVC 161
>At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 210
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 325 NEHITCPLCXGYYIXATTIV---ECLHSFCRSCIIKHLKAKSYCPVC 456
NE C +C + ++V C H + CI K L+ K CP+C
Sbjct: 157 NEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPIC 203
>At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 624
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
I C H F CI L+ KS CP+C I P
Sbjct: 565 IAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPVPP 599
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
I C H F CI L KS CP+C I P
Sbjct: 414 ITACSHCFHVDCIDPWLMKKSTCPLCRAEIPPVPP 448
>At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q06003 Goliath
protein (G1 protein) {Drosophila melanogaster}; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 381
Score = 30.7 bits (66), Expect = 0.88
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 325 NEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+E C +C Y T + E C H F C+ K L + CP+C+ I
Sbjct: 320 HEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
C +C + ++ C HSF SC+ L+A CP C I
Sbjct: 203 CSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAI 247
>At5g37200.1 68418.m04466 zinc finger (C3HC4-type RING finger)
family protein low similarity to ring-H2 finger protein
RHY1a from Arabidopsis thaliana [gi:3790593], ring
finger-H2 protein from Xenopus laevis [gi:13752371];
contains Pfam domain zinc finger, C3HC4 type (RING
finger) PF00097
Length = 217
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 328 EHITCPLCXGYYIXA----TTIVECLHSFCRSCIIKHLKAKSYCPVC 456
E TC +C + + + +CLH F + C+ + L ++ CP+C
Sbjct: 155 EDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLC 201
>At4g09560.1 68417.m01571 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 431
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATT--IVECLHSFCRSCIIKHL-KAKSYCPVCE 459
E I C +C Y I+ C H F +C+ L + KS+CPVC+
Sbjct: 210 EATTSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCK 259
>At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 345
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
+ C +C + T+ C H+F +CI L + S CPVC + S KP
Sbjct: 121 VECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANL-SLKP 172
>At3g45570.1 68416.m04922 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 312
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAK 438
TC +C G I I C H FC C+ +H++ K
Sbjct: 162 TCSICSGDNIEPEQIFSVALCGHEFCMECVKQHIEVK 198
>At3g42180.2 68416.m04334 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 341
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK------PNIKLDK 501
CP GY + + VE ++S C +I + + V + S + P+IK K
Sbjct: 232 CP--SGYEVASPREVEAIYSGCVPVVISDNYSLPFNDVLDWSKFSVEIPVDKIPDIK--K 287
Query: 502 ALQDIVYKLVPGLFQKEMERRQHFYASRPXQ 594
LQ+I + +++ M+ R+HF +RP Q
Sbjct: 288 ILQEIPHDKYLRMYRNVMKVRRHFVVNRPAQ 318
>At3g42180.1 68416.m04335 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 425
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK------PNIKLDK 501
CP GY + + VE ++S C +I + + V + S + P+IK K
Sbjct: 316 CP--SGYEVASPREVEAIYSGCVPVVISDNYSLPFNDVLDWSKFSVEIPVDKIPDIK--K 371
Query: 502 ALQDIVYKLVPGLFQKEMERRQHFYASRPXQ 594
LQ+I + +++ M+ R+HF +RP Q
Sbjct: 372 ILQEIPHDKYLRMYRNVMKVRRHFVVNRPAQ 402
>At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 217
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 370 ATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIK 492
A + C H F SC+ L +S CPVC + P ++
Sbjct: 113 ARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLE 153
>At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
CP+C + + + C H + CI+ L + CPVC + SA
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 237
>At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
CP+C + + + C H + CI+ L + CPVC + SA
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 237
>At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINSA 477
CP+C + + + C H + CI+ L + CPVC + SA
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 237
>At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCE 459
+ E C +C Y + E C H + CI K L K+ CP+C+
Sbjct: 485 QTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICK 534
>At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCE 459
+ E C +C Y + E C H + CI K L K+ CP+C+
Sbjct: 485 QTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICK 534
>At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q90972 RING finger
protein 13 {Gallus gallus}; contains Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 407
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCE 459
E +C +C Y + E C H F C+ K LK + CP+C+
Sbjct: 351 EDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396
>At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
TC LC + C H F CI K L + CP+C + I
Sbjct: 113 TCGLCLLEEQHLFDMPNCAHVFHGDCIDKWLSTSNNCPLCGVEI 156
>At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +1
Query: 295 VPQRTLLGEVNEHITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVC 456
+P+ + E ++C +C + T+ C H F CI K L+ + CP+C
Sbjct: 161 IPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLC 217
>At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 124
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAKSYCPVCEMMIN 471
I +C H F R C++ + A CP+C ++
Sbjct: 94 IKKCRHVFHRFCMLSWIDANRNCPICRCSVD 124
>At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 4706
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMIN 471
C +C + T IV C H CR C + S CP C + +N
Sbjct: 4660 CQICQTKEVEVT-IVPCGHVLCRHC----STSVSRCPFCRLQVN 4698
>At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 151
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+C HSF +CI L+ CP+C +
Sbjct: 115 KCNHSFHMNCIFSWLRESQDCPICRSTV 142
>At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 200
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
C H+F +CI K L ++S CP C ++ K
Sbjct: 132 CSHAFHVACIDKWLTSRSSCPSCRRILVPVK 162
>At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-related
low similarity to RING-H2 zinc finger protein ATL4
[Arabidopsis thaliana] GI:4928399
Length = 174
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLD 498
C +C G + +VE C H F CI L + + CP+C ++ + +D
Sbjct: 105 CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTKTSVD 160
>At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 370 ATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
A T + C H F C+++ L K+ CP+ M +
Sbjct: 167 APTRMSCSHVFHNGCLVEWLNRKNTCPMFHMQL 199
>At4g10940.1 68417.m01779 PHD finger family protein contains Pfam
profile: PF00097 zinc finger, C3HC4 type
Length = 192
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCE 459
C +C I + C H FC CI + CP+C+
Sbjct: 31 CGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMNLCPLCQ 70
>At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 212
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 316 GEVNEHITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVC 456
GE E TC +C Y+ + EC H F C+ LK CPVC
Sbjct: 129 GEGRE-TTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVC 177
>At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 315
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
C H F C++ L+ S CPVC ++
Sbjct: 243 CKHKFHSDCLLPWLELHSSCPVCRYLL 269
>At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 340 CPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPN-IKLDKAL 507
C +C G + + +C H F CI L ++S CP C + +P+ + + +
Sbjct: 114 CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQPSPMAVSRRD 173
Query: 508 QDIVYKLV 531
+D+V +V
Sbjct: 174 EDMVVSIV 181
>At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 340 CPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPN 486
CP+C + + + C H + CI+ L ++ CPVC + + N
Sbjct: 121 CPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKELPQDRNN 171
>At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 180
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVC--EMMINSAKPNIKLD 498
+ C +C ++ + + C H + CII L + + CP+C E+ + S++ + LD
Sbjct: 94 LPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPVASSEDDSGLD 152
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 310 LLGEVNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
LL + H C +C ++ ++ E C H + CI+ L ++ CPVC
Sbjct: 193 LLSDSQSH--CAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVC 241
>At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
V E+ C +C + +IV C H F C +K + CP+C +
Sbjct: 255 VGENEMCSICLEEFDDGRSIVALPCGHEFDDECALKWFETNHDCPLCRFKL 305
>At1g77830.1 68414.m09068 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIV---ECLHSFCRSCIIKHLKAKSYCPVCEM 462
+C LC Y IV +C H F +CI ++L CPVC +
Sbjct: 128 SCCLCQKGYPKEDEIVHKTKCNHIFYGTCISRYLLHTPRCPVCSV 172
>At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 367
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMM 465
C +C Y + E C H F C+ + L K+ CPVC+ M
Sbjct: 319 CIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCKTM 362
>At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); similar to GI:4928397
from [Arabidopsis thaliana] (Plant Mol. Biol. 40 (4),
579-590 (1999))
Length = 413
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVC 456
E CP+C + ++ +C H+F SCI L + + CP+C
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLC 218
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAK-SYCPVC 456
IV+C H FC+ CI + L+ + CP C
Sbjct: 343 IVKCYHLFCQQCIQRSLEIRHRKCPGC 369
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQ 510
C +C G Y + + C H+F CI L + + CP+C + + ++ D +
Sbjct: 100 CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVP 159
Query: 511 DIV 519
+V
Sbjct: 160 SLV 162
>At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 179
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +1
Query: 280 SNVAVVPQRTLLGEVNEHI--TCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYC 447
S V +P R ++GE E +C +C + E C H F C+ + L + C
Sbjct: 88 SEVENMP-RVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATC 146
Query: 448 PVC--EMMINSAKPNIKL 495
P+C EM + + K+
Sbjct: 147 PMCRYEMPVEEVEEEKKI 164
>At1g09520.1 68414.m01067 expressed protein
Length = 260
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIK 492
C + I + L FC C++++ A S+CP C + +S+ P+ +
Sbjct: 29 CGSSDAWVIHTVRLRASLRFFCTHCLLRNHPA-SFCPGCFALYDSSPPSFR 78
>At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 308
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIXAT---TIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSA---K 480
E +E C +C G + + C H F CI L + S CP+C + +A +
Sbjct: 131 EEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDE 190
Query: 481 PNIKL 495
N+KL
Sbjct: 191 ENLKL 195
>At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKAKSYCPVC 456
I +C H F RSCI LK CP C
Sbjct: 133 IKKCRHVFHRSCIDSWLKQNRSCPNC 158
>At5g15820.1 68418.m01851 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 348
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVC 456
I C +C + + + C H + CII L ++ CPVC
Sbjct: 289 IVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVC 331
>At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 371
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 325 NEHITCPLCXGYYIXA--TTIVECLHSFCRSCIIKHLKAKSYCPVC 456
N C +C + +T+ C H + CII+ + CP+C
Sbjct: 41 NTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPIC 86
>At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger)
family protein (ATL5) identical to RING-H2 zinc finger
protein ATL5 [Arabidopsis thaliana]
gi|4928401|gb|AAD33583
Length = 257
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKP 483
+C H F CI +++S CP+C + A+P
Sbjct: 131 KCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQP 163
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLH-SFCRSCIIKHLKAKSY-CPVCEMMIN 471
TC +C A V C H + C SC+ K +K+K++ CPVC I+
Sbjct: 386 TCAICLDAPSEAVC-VPCGHVAGCMSCL-KEIKSKNWGCPVCRAKID 430
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLH-SFCRSCIIKHLKAKSY-CPVCEMMIN 471
TC +C A V C H + C SC+ K +K+K++ CPVC I+
Sbjct: 410 TCAICLDAPSEAVC-VPCGHVAGCMSCL-KEIKSKNWGCPVCRAKID 454
>At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
C HSF CI K L ++S CP C ++ +
Sbjct: 121 CGHSFHVECIDKWLVSRSSCPSCRRILTPVR 151
>At1g74760.1 68414.m08662 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 255
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE---CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKAL 507
CP+C Y +++ V+ C H +C ++ + CPVC + + K+ AL
Sbjct: 149 CPICHEYIFTSSSPVKALPCGHLMHSTCFQEYTCSHYTCPVCSKSLGDMQVYFKMLDAL 207
>At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 704
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLK-AKSYCPVCEMMINS---AKPNIKLDKALQDI 516
EC HSF CI ++K CPVC N PN K ++ I
Sbjct: 91 ECSHSFHFQCITTNVKHGNQICPVCRAKWNEIPIQSPNAKPKSGVKPI 138
>At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+C H+F CI LK+ S CP+C +
Sbjct: 160 KCNHAFHLPCIDTWLKSHSNCPLCRAFV 187
>At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 666
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCE 459
C +C Y + + C H F +C+ + L K+ CP+C+
Sbjct: 619 CCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICK 660
>At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 395
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
C H F CI+ L ++ CPVC + S
Sbjct: 233 CKHIFHGDCIVPWLSIRNSCPVCRFELPS 261
>At3g25030.1 68416.m03128 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
I+C +C + C H+FCR C + + CP+C I
Sbjct: 200 ISCCVCM-VRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTI 243
>At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger)
family protein (ATL3) identical to RING-H2 zinc finger
protein (ATL3) GB:AF132013 (Arabidopsis thaliana)
Length = 324
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 334 ITCPLCXGYYIX---ATTIVECLHSFCRSCIIKHLKAKSYCPVC 456
+ C +C + A + +C HSF CI ++ S CP+C
Sbjct: 125 LECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPIC 168
>At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
C +C G A + C H++CR C + + CP+C I
Sbjct: 156 CCVCMGREKGAA-FIPCGHTYCRVCSREIWMNRGTCPLCNRSI 197
>At1g61620.1 68414.m06943 expressed protein contains Pfam profile:
PF01363 FYVE zinc finger
Length = 310
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +1
Query: 340 CPLCXGYYIXATTIV---ECLHSFCRSCIIKHLKAKSYCPVCE 459
CP C ++V C H FC+ C K + C VC+
Sbjct: 221 CPSCKVTLTNTMSLVALSSCGHVFCKKCAEKFMPVDKVCLVCD 263
>At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHG1a
GI:3822225 from [Arabidopsis thaliana]; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 494
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCE 459
C +C + I ++C H + C+ K L K+ CP+C+
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICK 483
>At1g17145.1 68414.m02090 expressed protein
Length = 335
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS----YCPVCE 459
CP+C YY C+ S C C ++ S CP C+
Sbjct: 63 CPICFLYYPSLNRSRCCMKSICTECFLRMKSPNSAQPTQCPFCK 106
>At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc
finger (C3HC4-type RING finger) family protein identical
to COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|5929906|gb|AAD56636; contains Pfam profile: PF00097
zinc finger, C3HC4 type
Length = 334
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 334 ITCPLCXGYYIXATT--IVECLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
+ C +C + T + C H + CI+ L ++ CPVC + +
Sbjct: 255 MVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLET 303
>At5g55970.2 68418.m06981 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 343
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCE 459
V + C +C Y + + C H F C+ + L+ S CP+C+
Sbjct: 291 VTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338
>At5g55970.1 68418.m06980 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 343
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTI--VECLHSFCRSCIIKHLKAKSYCPVCE 459
V + C +C Y + + C H F C+ + L+ S CP+C+
Sbjct: 291 VTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338
>At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 545
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 340 CPLCXGYYIXATTI--VECLHSFCRSCIIKHLK-AKSYCPVC 456
C +C Y A +I + C H F ++C+ K LK CP+C
Sbjct: 490 CYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLC 531
>At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 283
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+ C +C + E C H F CI+ L K+ CP C +
Sbjct: 212 VECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQL 258
>At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +1
Query: 322 VNEHITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNI 489
V E C +C + T+ +C H+F CI L++ + CP+C I A I
Sbjct: 48 VVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMI 106
>At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 376 TIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
T+ C H+F CI + L++ CP+C I
Sbjct: 171 TLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 376 TIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
T+ C H+F CI + L++ CP+C I
Sbjct: 171 TLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 227
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSY---CPVCEMMINSAK--PNIKLDKALQDIVYKLVPGL 540
C H FC C+ + L S+ CPVC+ ++ K P K D K PGL
Sbjct: 43 CGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGL 98
>At1g78420.1 68414.m09138 expressed protein
Length = 401
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKS----YCPVCE 459
CP+C YY C+ S C C ++ S CP C+
Sbjct: 59 CPICFLYYPSLNRSRCCMKSICTECFLQMKNPNSARPTQCPFCK 102
>At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 404
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATT---IVECLHSFCRSCIIKHLKAKSYCPVC 456
E + C +C + T I +C H F CI L++ + CP+C
Sbjct: 140 EALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLC 185
>At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 281
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
TC +C A +V C H F C+ L+ ++ CP C ++ A+
Sbjct: 112 TCIICREEMTSAKKLV-CGHLFHVHCLRSWLERQNTCPTCRALVVPAE 158
>At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 389
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
TC +C A +V C H F C+ L+ ++ CP C ++ A+
Sbjct: 220 TCIICREEMTSAKKLV-CGHLFHVHCLRSWLERQNTCPTCRALVVPAE 266
>At1g26800.1 68414.m03266 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
C +C + T+ E C H F CI K L CPVC
Sbjct: 113 CVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVC 153
>At1g05120.1 68414.m00514 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P79051 DNA
repair protein rhp16 (RAD16 homolog)
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 833
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 379 IVECLHSFCRSCIIKHLKA--KSYCPVCEMMI 468
+ C H FC++C+I + K CP C ++
Sbjct: 591 VTSCAHVFCKACLIGFSASLGKVTCPTCSKLL 622
>At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL4 [Arabidopsis thaliana] GI:4928399; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 210
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = +1
Query: 268 KMDNSNVAVVP---QRTLLGEVNEHITCPLCXGYYIXATTI---VECLHSFCRSCIIKHL 429
++D S + +P +T++G ++ C +C + + +C H+F CI L
Sbjct: 95 EIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWL 154
Query: 430 KAKSYCPVC 456
S CP+C
Sbjct: 155 LTNSTCPLC 163
>At5g41150.1 68418.m05002 repair endonuclease (RAD1) (UVH1) contains
Pfam PF02732 : ERCC4 domain; contains TIGRFAM TIGR00596:
DNA repair protein (rad1); almost identical to 5' repair
endonuclease (GI:8926611) [Arabidopsis thaliana]
Length = 956
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 588 RPRGIKMLPPFHFFLEEPRHKFVDYVLQCFVKF---DIGFCR 472
RP G K LPP HF+ E +D + + D+GF R
Sbjct: 590 RPSGAKKLPPVHFYALESDQPILDILKPSVIIVYHPDMGFVR 631
>At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 376
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMINSAKPNIKLDKALQD 513
C H+F +CI L++ S CP+C + S P ++ + D
Sbjct: 162 CSHAFHLNCIDTWLQSNSTCPLCRGTLFS--PGFSMENPMFD 201
>At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 353
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = +1
Query: 244 IISDKKVVKMDNSNVAVVPQRTLLGEVNEH---ITCPLCXGYYIXATTI---VECLHSFC 405
++ +K +D S + +P G ++ H + C +C + + +C H+F
Sbjct: 58 VVGGRKNSGIDRSVIESLPVFRF-GALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFH 116
Query: 406 RSCIIKHLKAKSYCPVCEMMIN 471
C+ L A S CP+C ++
Sbjct: 117 VECVDTWLDAHSTCPLCRYRVD 138
>At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 472
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 271 MDNSNVAVVP---QRTLLGEVNEHITCPLCXGYYIXATTI---VECLHSFCRSCIIKHLK 432
+D S + +P ++++G N C +C + + +C H+F CI L
Sbjct: 108 VDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLL 167
Query: 433 AKSYCPVCEMMINS 474
+ S CP+C + S
Sbjct: 168 SHSTCPLCRSSLLS 181
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like ABC
transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -1
Query: 563 RLSISFWKSPGTSL*TMSCSALSSLILG 480
++++S+W+SP +L M + +SSLI G
Sbjct: 1183 KMNLSYWRSPSYNLMRMMHTLVSSLIFG 1210
>At3g08720.2 68416.m01014 serine/threonine protein kinase (PK19)
identical to serine/threonine-protein kinase AtPK19
(Ribosomal-protein S6 kinase homolog) [Arabidopsis
thaliana] SWISS-PROT:Q39030
Length = 471
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 478 KPNIKLDKALQDIVYKLVPGLFQKEMERR 564
K IKL + L + + L+ GL QKE ERR
Sbjct: 350 KDKIKLPQFLSNEAHALLKGLLQKEPERR 378
>At3g08720.1 68416.m01013 serine/threonine protein kinase (PK19)
identical to serine/threonine-protein kinase AtPK19
(Ribosomal-protein S6 kinase homolog) [Arabidopsis
thaliana] SWISS-PROT:Q39030
Length = 471
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 478 KPNIKLDKALQDIVYKLVPGLFQKEMERR 564
K IKL + L + + L+ GL QKE ERR
Sbjct: 350 KDKIKLPQFLSNEAHALLKGLLQKEPERR 378
>At2g39420.1 68415.m04839 esterase/lipase/thioesterase family
protein similar to monoglyceride lipase from [Homo
sapiens] GI:14594904, [Mus musculus] GI:2632162;
contains Interpro entry IPR000379
Length = 317
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 498 QSTAGHSLQTCAWALPKRNGKAATFLC 578
++T G L TC W K+ KA F+C
Sbjct: 16 KNTRGMKLFTCKWVPAKQEPKALVFIC 42
>At2g34780.1 68415.m04270 expressed protein
Length = 1297
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3
Query: 294 NGNVTIIHFNNFFIGNYVRRNHFLHGVTVPPQLLTQNIKAKKSHL 160
+GN + + +IG RR+ F GVT+ Q +N+ A+KS+L
Sbjct: 12 SGNPCCLAWQGKYIGMKKRRDAFKEGVTL-LQKAIENVNAEKSNL 55
>At2g22010.1 68415.m02614 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 1280
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 328 EHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
E TC +C A I C H C CI +HL C C +
Sbjct: 1213 EDNTCCICYAGEANAM-IAPCSHRSCYGCITRHLLNCQRCFFCNATV 1258
>At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 390
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLKAKSYCPVCEMMIN 471
+C H+F CI + L+ + CP+C +N
Sbjct: 142 KCRHAFHIGCIDQWLEQHATCPLCRNRVN 170
>At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +1
Query: 319 EVNEHITCPLCXGYYIX---ATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMINSAK 480
+ + + C +C + A + C H F CI ++ S CP+C + S +
Sbjct: 113 DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVE 169
>At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 219
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +1
Query: 340 CPLCXGYYIXATTIV---ECLHSFCRSCIIKHLKAKSYCPVC 456
C +C ++ + C H F CI K L + S CP C
Sbjct: 131 CAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTC 172
>At1g05055.1 68414.m00506 basic transcription factor 2, 44kD
subunit-related contains weak similarity to
Swiss-Prot:Q13888 TFIIH basal transcription factor
complex p44 subunit (Basic transcription factor 2 44 kDa
subunit, BTF2-p44, General transcription factor IIH
polypeptide 2) [Homo sapiens]
Length = 421
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 301 QRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCE 459
Q++L+G N+ + C C +C H FC C I ++ CP CE
Sbjct: 366 QQSLIGAGNKPVPCVTCR----------KCKHYFCLDCDIYIHESLHNCPGCE 408
>At5g37560.1 68418.m04523 zinc finger protein-related contains weak
similarity to zinc fingers and Pfam:PF01485 IBR domain
Length = 408
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +1
Query: 334 ITCPLCXGYYIXATTIV--ECLHSFCRSCIIKHLKAK---SYCPVCEMMINSAKPNIKLD 498
+TC +C ++ +CLH C SC+ + +K K P C + + K + L+
Sbjct: 163 LTCSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKLRSGIVPPC--LEDGCKSELTLE 220
Query: 499 KALQDIVYKLVPGLFQKEME 558
+ KL+ +++++ME
Sbjct: 221 SCSMVLTPKLIE-MWKRKME 239
>At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 382 VECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+ C H+FCR C + + CP+C I
Sbjct: 230 IPCGHTFCRLCSRELWVQRGNCPLCNTAI 258
>At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 382 VECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
+ C H+FCR C + + CP+C I
Sbjct: 269 IPCGHTFCRLCSRELWVQRGNCPLCNTAI 297
>At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
CP+C + + + C H + CI+ L + CPVC + S
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232
>At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMINS 474
CP+C + + + C H + CI+ L + CPVC + S
Sbjct: 186 CPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232
>At3g14970.1 68416.m01893 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 220
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMM 465
C H F R+C L+ CPVC M
Sbjct: 192 CSHVFHRTCGEDWLRCSGICPVCRAM 217
>At3g13228.1 68416.m01663 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 325
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVC 456
C +C + +V C H F C +K + +CP+C
Sbjct: 275 CTICLEEFNAGGILVALPCGHDFDDECAVKWFETNHFCPLC 315
>At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 425
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Frame = +1
Query: 259 KVVKMDNSNVAVVPQRTLLGEVNEHITCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAK 438
KV+ DN +G C +C + C H +C SC+ + L+
Sbjct: 114 KVMAEDNVTEEKRDVEKSVGSDGSFFDCYICLDLS-KDPVVTNCGHLYCWSCLYQWLQVS 172
Query: 439 --SYCPVC--EMMINSAKP 483
CPVC E+ + + P
Sbjct: 173 EAKECPVCKGEVSVKTVTP 191
>At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger)
family protein very low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 692
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLK-AKSYCPVC 456
EC HSF CI ++K CPVC
Sbjct: 91 ECSHSFHFHCIASNVKHGNQVCPVC 115
>At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL6 [Arabidopsis thaliana] GI:4928403; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 217
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +1
Query: 340 CPLCXGYYIXA---TTIVECLHSFCRSCIIKHLKAKSYCPVC 456
C +C G Y + +C H F CI L+ CPVC
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVC 188
>At1g55700.1 68414.m06378 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 679
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 397 SFCRSCIIKHLKAKSY--CPVCEMMINSA 477
SFC++CII L+++S+ C C +++ A
Sbjct: 394 SFCQACIIPILESESFYGCTQCSFLLHEA 422
>At1g18770.1 68414.m02340 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 106
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 340 CPLCXGYYIXATTIVE--CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
C +C + +V C H F C++K + CP+C +
Sbjct: 59 CIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCRFKL 103
>At5g53910.1 68418.m06708 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative contains Pfam
profile: PF00097 zinc finger, C3HC4 type (RING finger)
Length = 230
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVC 456
C H F CI++ K + CP+C
Sbjct: 190 CGHEFDNKCIMEWFKVRYNCPLC 212
>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 492
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 337 TCPLCXGYYIXATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
TC +C A ++ C H F C+ L+ + CP C ++
Sbjct: 291 TCIICREEMTNAKKLI-CGHLFHVHCLRSWLERQQTCPTCRALV 333
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 370 ATTIVECLHSFCRSCIIKHLKAKSYCPVCEMMI 468
A + C H F CI L++ S CP+C +
Sbjct: 101 ARVLPSCDHWFHVECIDSWLQSNSTCPICRKRV 133
>At3g08730.1 68416.m01015 serine/threonine protein kinase (PK1)
(PK6) identical to serine/threonine-protein kinase
AtPK1/AtPK6 (ribosomal-protein S6 kinase ATPK6)
[Arabidopsis thaliana] SWISS-PROT:P42818
Length = 465
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 478 KPNIKLDKALQDIVYKLVPGLFQKEMERR 564
K IKL + L + + ++ GL QKE ERR
Sbjct: 344 KDKIKLPQFLSNEAHAILKGLLQKEPERR 372
>At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 227
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 385 ECLHSFCRSCIIKHLKAKSYCPVC 456
+C HSF CI +++S CP+C
Sbjct: 126 KCGHSFHVDCIDTWFRSRSTCPLC 149
>At2g39410.2 68415.m04837 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 317
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 498 QSTAGHSLQTCAWALPKRNGKAATFLC 578
++T G L TC W R +A FLC
Sbjct: 16 KNTRGFKLFTCRWLPTNREPRALVFLC 42
>At2g39410.1 68415.m04836 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 121
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 498 QSTAGHSLQTCAWALPKRNGKAATFLC 578
++T G L TC W R +A FLC
Sbjct: 16 KNTRGFKLFTCRWLPTNREPRALVFLC 42
>At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 535
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 286 VAVVPQRTLLGEVNEHITCPLCXGYYIXAT--TIVECLHSFCRSCIIKHLKAKSYCPVCE 459
VA++P R + E E C +C + + T + C H + C+ K LK + CP C
Sbjct: 467 VAMLP-RVAMVEKGE---CVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCR 522
Query: 460 MMIN 471
++
Sbjct: 523 YKLS 526
>At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 174
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 388 CLHSFCRSCIIKHLKAKSYCPVCEMMI 468
C H F CI K L + CP+C ++
Sbjct: 136 CPHVFHNDCIYKWLGHSNLCPLCRTVL 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,162,668
Number of Sequences: 28952
Number of extensions: 260922
Number of successful extensions: 948
Number of sequences better than 10.0: 237
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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