Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_P18
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.13 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.54 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   1.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.9  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   3.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   3.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   3.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   3.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   3.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   3.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   3.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   3.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   3.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   3.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.9  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 542 RCTRXVVPPVS-CWTPATVSPTPCPSTRDTHSP 637
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 343 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 438
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 548 TRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           T  + P ++CW   +++ +P P  + +  PTPS
Sbjct: 314 TTVMSPTINCW---SLTSSPPPPYQISAQPTPS 343


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +1

Query: 220 SWEGPAIRAVMVGMGXKDSYVXDEAQSKRGILTLKYPIEHG 342
           SW G   +   VG+    S++  +   K+ +    YP E+G
Sbjct: 36  SWPGRPPKRAPVGLSLAASHLQQQQLKKQRLDNGDYPYENG 76


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 213 GTRREEHHLLRNRP 172
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 459 GQQREXDPDHVRNIQHARHVRRHPSRA 539
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 213 GTRREEHHLLRNRP 172
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 213 GTRREEHHLLRNRP 172
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 246 GPDGGAFPRSRGTRREEHHLLRNRPCT 166
           GP G  F  ++  R+E      + PCT
Sbjct: 668 GPSGDCFYENKFYRQEAQWTSSDNPCT 694


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 83  PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 312 PDPQIPHRTRNRH 350
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 509 PPCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 646
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -3

Query: 609 HGVGDTVAGVQHDTGGTTXRVQREHGLDGDVHG 511
           HG    V G+         ++  +H LD D  G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 381 MPNLLHVIPVSDDSVFD 331
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 381 MPNLLHVIPVSDDSVFD 331
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 381 MPNLLHVIPVSDDSVFD 331
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 381 MPNLLHVIPVSDDSVFD 331
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -3

Query: 609 HGVGDTVAGVQHDTGGTTXRVQREHGLDGDVHG 511
           HG    V G+         ++  +H LD D  G
Sbjct: 600 HGYAFNVIGIGRSPDQNVKKINLKHALDLDRQG 632


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,515
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)