Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P15
(585 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 79 3e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 71 9e-13
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 69 2e-12
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 47 1e-05
SB_35208| Best HMM Match : EGF_CA (HMM E-Value=1.2e-09) 29 3.7
SB_27951| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_6908| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-32) 28 4.9
SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 28 6.4
SB_58884| Best HMM Match : 7tm_2 (HMM E-Value=2.4e-29) 27 8.5
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 79.0 bits (186), Expect = 3e-15
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = +3
Query: 264 DYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFP 443
D R TPS VAFS R++G AAKNQ+ N +NTVF KRL+GRKF DP+V +++ H+P
Sbjct: 32 DQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWP 91
Query: 444 FKVEQRSDGGIGIRVNYLNEDNVFTP 521
F V + + I+V + E F P
Sbjct: 92 FHVIREGERP-KIQVEFKGEKKSFFP 116
Score = 31.5 bits (68), Expect = 0.52
Identities = 31/133 (23%), Positives = 56/133 (42%)
Frame = +2
Query: 182 PVIGIDFGNESCYIAVAKAGGIXTIAN*LQSSRDTIMCCFFTKESNIGCGSQEPNGDQYE 361
P +GID G + V + G + IAN + F E IG ++ E
Sbjct: 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPE 64
Query: 362 EYCIWFQTTSGKKIFRPSCSKRIKTFPFQG*TEV*WRYWNKSQLPQ*RQCLYPLKQITAM 541
+ G+K P ++ + +PF E R + + ++ +P ++I++M
Sbjct: 65 NTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREG-ERPKIQVEFKGEKKSFFP-EEISSM 122
Query: 542 LLTKLKDVAATAL 580
+LTK+K+ A L
Sbjct: 123 VLTKMKETAEAYL 135
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +3
Query: 345 MVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTP 521
M++N+KNT+ FKR +GRKFSDP VQKE+ H P+KV + + IGI+V YL + VF+P
Sbjct: 115 MISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSP 173
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 185 VIGIDFGNESCYIAVAKAGGIXTIAN 262
V+G D GN+SCYIAVA+ GGI T+AN
Sbjct: 3 VVGFDVGNQSCYIAVARGGGIETVAN 28
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 264 DYSLRGTPSCVAFSQKNRILGVAAKNQ 344
++S R TPS V+ K R++G + KNQ
Sbjct: 29 EFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +3
Query: 264 DYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFP 443
D R TPS VAF+ + R++G AAKNQ+ N NT+F KRL+GR+F DP V+ ++KH+
Sbjct: 32 DQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWS 91
Query: 444 FKVEQRSDGGIGIRVNYLNEDNVF 515
F+V + G ++V Y E F
Sbjct: 92 FEVVNEA-GRPKVKVEYKGETKTF 114
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 182 PVIGIDFGNESCYIAVAKAGGIXTIAN*LQSSRDTIMCCFFTKESNI 322
P IGID G + V + G + IAN Q +R T FT E +
Sbjct: 5 PAIGIDLGTTYSCVGVFQHGKVEIIAN-DQGNRTTPSYVAFTDEERL 50
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 70.5 bits (165), Expect = 9e-13
Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 264 DYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHF 440
D R TPS VAF+++ R++G AKNQ+ TN +NTVF KRL+GR + D VQ +LK F
Sbjct: 729 DQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFF 788
Query: 441 PFKVEQRS 464
PFKV ++
Sbjct: 789 PFKVVDKN 796
Score = 33.5 bits (73), Expect = 0.13
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Frame = +2
Query: 185 VIGIDFGNESCYIAVAKAGGIXTIAN*LQSSRDTIMCCFFTKESN--IGCGSQEPNGDQY 358
VIGID G + V K G + IAN Q +R T FT+E IG G++
Sbjct: 703 VIGIDLGTTYSCVGVFKNGRVEIIAN-DQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Query: 359 EEYCIWFQTTSGKKIFRPSCSKRIKTFPFQG*TEV*WRYWNKSQLPQ*RQCLYPLKQITA 538
E + G+ S +K FPF+ + + + + + ++I+A
Sbjct: 762 ENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIK--TFAAEEISA 819
Query: 539 MLLTKLKDVAATAL 580
M+LTK+K+ A L
Sbjct: 820 MVLTKMKETAEAYL 833
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +3
Query: 264 DYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFP 443
D R TPS V F+ R++G AAKNQ+ N +NT+F KRL+GR++ D VQ ++K +P
Sbjct: 32 DQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWP 91
Query: 444 FKVEQRSDGGIGIRVNYLNEDNVF 515
FK+ + I+V Y E F
Sbjct: 92 FKIIS-DNNKPKIQVEYKGERKTF 114
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +3
Query: 285 PSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRS 464
PS VAF+ K ++G A +Q N KNT++ KR +G+ F+ + + K + F+V
Sbjct: 68 PSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDK 127
Query: 465 DGGIGIRVNYLNEDNVFTP 521
G G V V TP
Sbjct: 128 RGNAGFLVGKKGNFTVITP 146
>SB_35208| Best HMM Match : EGF_CA (HMM E-Value=1.2e-09)
Length = 598
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 442 GKCFNSF*TRGSENFLPRSRLKPN 371
G CF + TRGSE+FL +R+ N
Sbjct: 374 GTCFPTLKTRGSESFLGEARIATN 397
>SB_27951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 403 NFLPRSRLKPNTVFFILVTIWFLAATPNIRFF 308
N L R RL P T ++L+ IW LA +I F
Sbjct: 130 NALRRWRLTPETCPYVLIAIWVLALAISIPDF 161
>SB_6908| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-32)
Length = 331
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 403 NFLPRSRLKPNTVFFILVTIWFLAATPNIRFF 308
N L R RL P T ++L+ IW LA +I F
Sbjct: 130 NALRRWRLTPETCPYVLIAIWVLALAISIPDF 161
>SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06)
Length = 632
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = -3
Query: 223 NIAGFITKINSNDG---T*QPVVIDKFSLFHVKKYVKLASSLRHKVEL-VSKSKLA 68
NI K+N+ DG T +P+ I+ + FH +K KL L+ +E + +S+L+
Sbjct: 398 NIQTDALKLNATDGHTWTEEPIEINYSNDFHTRKLSKLRDFLQQGIEFSIVESRLS 453
>SB_58884| Best HMM Match : 7tm_2 (HMM E-Value=2.4e-29)
Length = 640
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 114 LANLTYFFT*NNENLSITTGCYVPSLELILVMNPAI 221
L N + T NN NL+ +T C+V + L+ + P I
Sbjct: 373 LKNGEFVVTRNNANLAFSTRCWVTRIVLVSLFVPPI 408
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,770,068
Number of Sequences: 59808
Number of extensions: 364733
Number of successful extensions: 731
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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