Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_P15
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    25   0.72 
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        25   0.72 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.7  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   6.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   6.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   6.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.9  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 415 RGSENFLPRSRLKPNTVFFILVTIWFLAATP 323
           R SEN    +  K   V  + +++WF+A TP
Sbjct: 263 RSSENQNTSAECKLAKVALMTISLWFMAWTP 293


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 415 RGSENFLPRSRLKPNTVFFILVTIWFLAATP 323
           R SEN    +  K   V  + +++WF+A TP
Sbjct: 13  RSSENQNTSAECKLAKVALMTISLWFMAWTP 43


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 488 DSYSNTAIRPLFNLEREMF*FFLNKRV 408
           D + NTA+   FN+  +M+ + L+  V
Sbjct: 120 DVFYNTAVWARFNVNEQMYLYALSVAV 146


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 165 TTGCYVPSLELILVMNP 215
           TT C+ PSL+  +V  P
Sbjct: 169 TTACFEPSLDYCVVKIP 185


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 488 DSYSNTAIRPLFNLEREMF*FFLNKRV 408
           D + NTA+   FN+  +M+ + L+  V
Sbjct: 120 DVFYNTAVWARFNVNEQMYLYALSVAV 146


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 401 IFRPSCSKRIKTFPF 445
           IFR SC   ++ FPF
Sbjct: 126 IFRSSCDIDVEFFPF 140


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 235 FSHSNIAGFITKINSNDGT 179
           FSH++  GF+T   +N GT
Sbjct: 258 FSHNDRLGFLTFCPTNLGT 276


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 358 ILVTIWFLAATPNIRFF 308
           +L  +W +   P  RFF
Sbjct: 640 VLTLVWMIIEPPGTRFF 656


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 358 ILVTIWFLAATPNIRFF 308
           +L  +W +   P  RFF
Sbjct: 730 VLTLVWMIIEPPGTRFF 746


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,579
Number of Sequences: 438
Number of extensions: 3482
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)