Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_P14
         (534 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    36   2e-04
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    36   2e-04
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    35   5e-04
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    35   5e-04
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    34   0.001
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    34   0.001
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    30   0.013
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    29   0.030
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    29   0.030
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   1.5  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   2.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   2.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.4  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 95  LCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPC 235
           +CF L   V+ ++ Y+++ D++DI+ ++     L A++ C L   PC
Sbjct: 11  VCF-LLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPC 56


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 95  LCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPC 235
           +CF L   V+ ++ Y+++ D++DI+ ++     L A++ C L   PC
Sbjct: 11  VCF-LLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPC 56


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 35.1 bits (77), Expect = 5e-04
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 89  YVLCFALFAAVYC--KETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPC 235
           Y+L F L   + C   E Y+++ DD+DI+ ++ N   L  +I C L   PC
Sbjct: 4   YILLFVL-VTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPC 53



 Score = 29.1 bits (62), Expect = 0.030
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 258 KKDIPEAVAXACGKCTPAQKH 320
           KK +P+A++  C KC   QKH
Sbjct: 61  KKILPDALSTGCNKCNEKQKH 81


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 35.1 bits (77), Expect = 5e-04
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 89  YVLCFALFAAVYC--KETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPC 235
           Y+L F L   + C   E Y+++ DD+DI+ ++ N   L  +I C L   PC
Sbjct: 4   YILLFVL-VTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPC 53



 Score = 29.1 bits (62), Expect = 0.030
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 258 KKDIPEAVAXACGKCTPAQKH 320
           KK +P+A++  C KC   QKH
Sbjct: 61  KKILPDALSTGCNKCNEKQKH 81


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +2

Query: 92  VLCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPCDAVSGAFQKGH 268
           +L  +L    Y +E YS + D ++I+ ++ N      +  CF+    C      F K H
Sbjct: 8   ILILSLLTWTYAEELYSDKYDYVNIDEILANDRLRNQYYDCFIDAGSCLTPDSVFFKSH 66



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 255 FKKDIPEAVAXACGKCTPAQKHLFKRFLE 341
           FK  I EA    C KCT  QK    +  E
Sbjct: 63  FKSHITEAFQTQCKKCTEIQKQNLDKLAE 91


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +2

Query: 92  VLCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPCDAVSGAFQKGH 268
           +L  +L    Y +E YS + D ++I+ ++ N      +  CF+    C      F K H
Sbjct: 8   ILILSLLTWTYAEELYSDKYDYVNIDEILANDRLRNQYYDCFIDAGSCLTPDSVFFKSH 66



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 255 FKKDIPEAVAXACGKCTPAQKHLFKRFLE 341
           FK  I EA    C KCT  QK    +  E
Sbjct: 63  FKSHITEAFQTQCKKCTEIQKQNLDKLAE 91


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 30.3 bits (65), Expect = 0.013
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 258 KKDIPEAVAXACGKCTPAQKHLFKRFLESRQXQATSXIRSLQN*IRSPXKAFR 416
           K+ +P+A+A  C KCT  Q+ + K+ ++           SL N    P K FR
Sbjct: 65  KRVLPDALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLAN-KYDPDKKFR 116



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +2

Query: 92  VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPCDA 241
           ++C  L AA+        E+Y+S+ D+++++ ++ +   L  +  C +    C A
Sbjct: 5   IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTA 59


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 29.1 bits (62), Expect = 0.030
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 258 KKDIPEAVAXACGKCTPAQKHLFKRFLE 341
           K+ +P+A+A  C KCT  Q+ + K+ ++
Sbjct: 65  KRVLPDALATDCKKCTDKQREVIKKVIK 92



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +2

Query: 92  VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPCDA 241
           ++C  L AA+        E+Y+S+ D+++++ ++ +   L  +  C +    C A
Sbjct: 5   IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTA 59



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 337 LKVVXDKLPQXYEAFKTKYDPQXKH 411
           +K + +  P+ +++   KYDP  K+
Sbjct: 91  IKFLVENKPELWDSLANKYDPDKKY 115


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 29.1 bits (62), Expect = 0.030
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 258 KKDIPEAVAXACGKCTPAQKHLFKRFLE 341
           K+ +P+A+A  C KCT  Q+ + K+ ++
Sbjct: 65  KRVLPDALATDCKKCTDKQREVIKKVIK 92



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +2

Query: 92  VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLKAFIGCFLXTSPCDA 241
           ++C  L AA+        E+Y+S+ D+++++ ++ +   L  +  C +    C A
Sbjct: 5   IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTA 59



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 337 LKVVXDKLPQXYEAFKTKYDPQXKH 411
           +K + +  P+ +++   KYDP  K+
Sbjct: 91  IKFLVENKPELWDSLANKYDPDKKY 115


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 322 YSNVSLKVVXDKLPQXYEAFK 384
           Y N+ + V  D +PQ  E+F+
Sbjct: 179 YDNIQVNVSGDNVPQPIESFE 199


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 346 RLSRKRLNRCFWAGVHLPHAXATAS 272
           R  ++   RC W G+H P   + A+
Sbjct: 342 RYRQELQKRCKWMGIHEPETTSDAT 366


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 346 RLSRKRLNRCFWAGVHLPHAXATAS 272
           R  ++   RC W G+H P   + A+
Sbjct: 342 RYRQELQKRCKWMGIHEPETTSDAT 366


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = -2

Query: 197 SENQYFPPKLQYPDRHFPSCMSLYSRQQRTVQNTARRNPSS*IIV 63
           +++  FPP  +   +H      +   Q   +QNT  +N    I++
Sbjct: 150 TQSVIFPPVYEILPQHHLDSRVIQEAQNIAIQNTQGKNNQQNILI 194


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,819
Number of Sequences: 438
Number of extensions: 2421
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)