Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_P12
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   3.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.8  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -3

Query: 593 SVGIHLFSYKGTLGRPSPMIGGRIVAF-DPPHNXY 492
           SVG++   Y  T   P P IG    AF  P  N Y
Sbjct: 6   SVGVYGAPYPSTDQNPYPSIGVESSAFYSPLSNPY 40


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 72  RRVSVIKQKHKNIRFM 119
           +RVS +K+K+ N++ M
Sbjct: 83  KRVSALKEKNPNLKVM 98


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 434 PQRILLPRSRRRGVLCFL 487
           PQ +LLP+    G  C L
Sbjct: 582 PQHMLLPKGTEAGYPCHL 599


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -2

Query: 423 PASKT*RATDQMFSDVPLHDACRAYQEGS*MCRDYP 316
           PA     A      DVP   + R+  E    CRD P
Sbjct: 45  PAPPEEEAASPTPGDVPTPSSPRSISEDPLNCRDLP 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,989
Number of Sequences: 336
Number of extensions: 2890
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)