Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_P12
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical pr...    36   0.033
U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of ap...    36   0.033
Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical pr...    33   0.23 
U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of ap...    33   0.23 
AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical ...    29   2.9  
AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical ...    29   2.9  
AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.    29   2.9  
AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.    29   2.9  
U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41532-4|AAK68320.1|  767|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41532-3|AAK68319.1|  797|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC006830-5|AAK68612.2|  569|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical
           protein C50B8.2 protein.
          Length = 308

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +3

Query: 417 TPEQLARNGFYYLGRGD---EVCCAFCKVXIMRWVEGDDPAADHRRWAPQCPFV 569
           T E+LAR GFY     +      C FC + I  + + DDP   H+  +P C FV
Sbjct: 45  TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97



 Score = 32.7 bits (71), Expect = 0.23
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
 Frame = +3

Query: 390 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVXIMRWVEGDDPAADHRRWAPQC 560
           FD+      T ++LA+ G++ +  + D+    C FC V +  + E DDP  +H++++  C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237

Query: 561 PFVR 572
            F++
Sbjct: 238 DFIK 241


>U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 308

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +3

Query: 417 TPEQLARNGFYYLGRGD---EVCCAFCKVXIMRWVEGDDPAADHRRWAPQCPFV 569
           T E+LAR GFY     +      C FC + I  + + DDP   H+  +P C FV
Sbjct: 45  TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97



 Score = 32.7 bits (71), Expect = 0.23
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
 Frame = +3

Query: 390 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVXIMRWVEGDDPAADHRRWAPQC 560
           FD+      T ++LA+ G++ +  + D+    C FC V +  + E DDP  +H++++  C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237

Query: 561 PFVR 572
            F++
Sbjct: 238 DFIK 241


>Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical
           protein T27F2.3 protein.
          Length = 155

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +3

Query: 348 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVXIMRWV 512
           DM      ++RL TF     D+ P    T + +A+ GFY  G     C AFC   +    
Sbjct: 10  DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68

Query: 513 EGDDPAADHRRWAPQCPFVR 572
           E DDP  +H +    C FVR
Sbjct: 69  E-DDPWYEHTKRDEPCEFVR 87


>U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 155

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +3

Query: 348 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVXIMRWV 512
           DM      ++RL TF     D+ P    T + +A+ GFY  G     C AFC   +    
Sbjct: 10  DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68

Query: 513 EGDDPAADHRRWAPQCPFVR 572
           E DDP  +H +    C FVR
Sbjct: 69  E-DDPWYEHTKRDEPCEFVR 87


>AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical
           protein H30A04.1b protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 345 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 443
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical
           protein H30A04.1a protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 345 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 443
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 345 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 443
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 345 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 443
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical
           protein T25F10.4 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 81  SVIKQKHKNIRFMRY*KKGKIYQLELTKVAKNGAAATL 194
           SVI Q  K++ F  +     ++QL  T + +N +  TL
Sbjct: 108 SVIIQSEKSLDFSSFPSDAHLFQLRFTSIIRNSSQLTL 145


>U41532-4|AAK68320.1|  767|Caenorhabditis elegans Hypothetical
           protein F11D5.3b protein.
          Length = 767

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -3

Query: 626 FVXTDSGRLSPSVGIHLFSYKGTLGRPSPMIGG 528
           F   D G L   +  H FSY G L     + GG
Sbjct: 159 FYNVDQGDLQSGISYHDFSYDGNLANSPHLTGG 191


>U41532-3|AAK68319.1|  797|Caenorhabditis elegans Hypothetical
           protein F11D5.3a protein.
          Length = 797

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = -3

Query: 626 FVXTDSGRLSPSVGIHLFSYKGTLGRPSPMIGG 528
           F   D G L   +  H FSY G L     + GG
Sbjct: 189 FYNVDQGDLQSGISYHDFSYDGNLANSPHLTGG 221


>AC006830-5|AAK68612.2|  569|Caenorhabditis elegans Hypothetical
           protein ZK105.5 protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 116 YALLKKRKNIPTGVDESC*KWSCRHVGDVKK-CAGCKNATFHWSAHVILMRVLND 277
           Y LLK  KN       S  K+  + V ++ K C G KN+T+  S H    R++ D
Sbjct: 427 YLLLKNYKN-------STKKFEAKDVANISKVCQGFKNSTYSCSPHDSSTRMVED 474


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,512,608
Number of Sequences: 27780
Number of extensions: 270613
Number of successful extensions: 571
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)