Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P10
(629 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 285 3e-77
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 284 3e-77
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 276 9e-75
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.75
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 1.7
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 5.3
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 28 7.0
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 9.3
09_06_0319 - 22293869-22293906,22294539-22295808 27 9.3
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 27 9.3
06_02_0084 - 11547820-11548773 27 9.3
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 285 bits (698), Expect = 3e-77
Identities = 133/192 (69%), Positives = 154/192 (80%), Gaps = 2/192 (1%)
Frame = +3
Query: 57 GQRDATGY--CKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 230
G+R A Y KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +S
Sbjct: 2 GRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVS 61
Query: 231 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 410
SEALEA RI CNKY+ KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGK
Sbjct: 62 SEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGK 121
Query: 411 PQGTVXRVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERDEF 590
PQGT RV IGQ ++SVR + EALRRAKFKFPGRQKI S KWGFTK+ R+E+
Sbjct: 122 PQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEY 181
Query: 591 DKLREEGRLAND 626
KL+ EGR+ +D
Sbjct: 182 VKLKAEGRIMSD 193
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2
Query: 47 MGRRPARCYRLLQ 85
MGRRPARCYR ++
Sbjct: 1 MGRRPARCYRQIK 13
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 284 bits (697), Expect = 3e-77
Identities = 128/181 (70%), Positives = 150/181 (82%)
Frame = +3
Query: 84 KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 263
KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI C
Sbjct: 320 KNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIAC 379
Query: 264 NKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVXRVRIG 443
NKY+ K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT RVRIG
Sbjct: 380 NKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIG 439
Query: 444 QPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERDEFDKLREEGRLAN 623
Q ++SVR D A EALRRAKFKFPGRQ++ S KWGFT+++RDE+ KL+ EGR+
Sbjct: 440 QVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVP 499
Query: 624 D 626
D
Sbjct: 500 D 500
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 276 bits (677), Expect = 9e-75
Identities = 126/181 (69%), Positives = 146/181 (80%)
Frame = +3
Query: 84 KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 263
KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA RI C
Sbjct: 9 KNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIAC 68
Query: 264 NKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVXRVRIG 443
NKY+ K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT RV IG
Sbjct: 69 NKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIG 128
Query: 444 QPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERDEFDKLREEGRLAN 623
Q ++SVR EALRRAKFKFPGRQKI S KWGFTK+ RDE+ +L+ EGR+
Sbjct: 129 QVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMP 188
Query: 624 D 626
D
Sbjct: 189 D 189
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 171 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 290
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -2
Query: 451 MGCPMRTRXTVP*GLPNAPRIPVWSLSAPAH 359
+ CP+ + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 405 GKPQGTVXRVRIGQPIMSVRSSD 473
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 536 LTSGELELGTAQSLDDLCLPPVTRAHGHDGLSNANTXYSTLRLAKRTTHP 387
L+SGEL +G + D+ LPPV G G S+A S + +R P
Sbjct: 134 LSSGELLIGASSPYDEPPLPPVHSRRG-AGRSSAVPRLSAPDIGRRYYEP 182
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 277 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 176
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 405 GKPQGTVXRVRIGQPIMSVRSSD 473
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>08_01_0889 +
8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -1
Query: 209 GHQVHAQWKVVNGRSLLTQIED-----TDLGIRYTPTEPRFRIRFIFAVAGSISLA 57
G +AQW V + RSLL + + LG+ + PR + R+ ++++ S S+A
Sbjct: 447 GKDEYAQWVVASQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQPRY-YSISSSPSMA 501
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +3
Query: 354 LSCAGADRLQTGMRGAFGK--PQGTVXRVRIGQPIMSVRSSDRWK 482
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,347,179
Number of Sequences: 37544
Number of extensions: 453121
Number of successful extensions: 1282
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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